RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 PRMT1Q99873 361 aaKnown RBP10.71□□□□□ -0.69
SHMT2-224ENST00000556737 BPIFA3Q9BQP9 254 aa10.71□□□□□ -0.69
SHMT2-224ENST00000556737 STK33Q9BYT3 514 aa10.71□□□□□ -0.69
SHMT2-224ENST00000556737 CIPCQ9C0C6 399 aa10.71□□□□□ -0.69
SHMT2-224ENST00000556737 MKRN2Q9H000 416 aaKnown RBP10.71□□□□□ -0.69
SHMT2-224ENST00000556737 FAM204AQ9H8W3 233 aa10.71□□□□□ -0.69
SHMT2-224ENST00000556737 VPS45Q9NRW7 570 aa10.71□□□□□ -0.69
SHMT2-224ENST00000556737 LIMA1Q9UHB6 759 aaKnown RBP10.71□□□□□ -0.69
SHMT2-224ENST00000556737 NOCTQ9UK39 431 aaKnown RBP10.71□□□□□ -0.69
SHMT2-224ENST00000556737 CDV3Q9UKY7 258 aaKnown RBP10.71□□□□□ -0.69
SHMT2-224ENST00000556737 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 FAM170AA1A519 330 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 KCNU1A8MYU2 1149 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 SLC30A4O14863 429 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 FOXD2O60548 495 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-224ENST00000556737 LSM8O95777 96 aaKnown RBP10.7□□□□□ -0.7
SHMT2-224ENST00000556737 APOEP02649 317 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 MMEP08473 750 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 C7P10643 843 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 TFE3P19532 575 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-224ENST00000556737 CDK11BP21127 795 aaKnown RBP10.7□□□□□ -0.7
SHMT2-224ENST00000556737 TACR2P21452 398 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 GABRB2P47870 512 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 LIMK1P53667 647 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 BPIFB4P59827 614 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 NOMO3P69849 1222 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 SLC6A3Q01959 620 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 CREB5Q02930 508 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 LMAN2Q12907 356 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 FSCBQ5H9T9 825 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 EFHC1Q5JVL4 640 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 TAF3Q5VWG9 929 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 RAP1GAP2Q684P5 730 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 MBLAC2Q68D91 279 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 OR6B2Q6IFH4 312 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 SDE2Q6IQ49 451 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 TRNP1Q6NT89 227 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 CHST9Q7L1S5 443 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 DGLUCYQ7Z3D6 616 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 CYP2U1Q7Z449 544 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 XYLT1Q86Y38 959 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 MFN1Q8IWA4 741 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 DHX40Q8IX18 779 aaKnown RBP10.7□□□□□ -0.7
SHMT2-224ENST00000556737 TMEFF1Q8IYR6 380 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 PGBD3Q8N328 593 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 TMEM35BQ8NCS4 154 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 CYB5D2Q8WUJ1 264 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 UCMAQ8WVF2 138 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 MYO19Q96H55 970 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 BTN2A3PQ96KV6 586 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 NOX5Q96PH1 765 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 TMEM245Q9H330 911 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 FAM207AQ9NSI2 230 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-224ENST00000556737 DDIT4Q9NX09 232 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 USP36Q9P275 1121 aaKnown RBP10.7□□□□□ -0.7
SHMT2-224ENST00000556737 INTS6Q9UL03 887 aaKnown RBP10.7□□□□□ -0.7
SHMT2-224ENST00000556737 CYP8B1Q9UNU6 501 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 CEP83Q9Y592 693 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 SDK1Q7Z5N4 2213 aa10.7□□□□□ -0.7
SHMT2-224ENST00000556737 ATXN2Q99700 1313 aaKnown RBP10.69□□□□□ -0.7
SHMT2-224ENST00000556737 MED19A0JLT2 244 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-224ENST00000556737 LNP1A1A4G5 178 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 PATE3B3GLJ2 98 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 I6L893 689 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-224ENST00000556737 ZNF217O75362 1048 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 GFPT2O94808 682 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 LUC7L3O95232 432 aaKnown RBP10.69□□□□□ -0.7
SHMT2-224ENST00000556737 DLDP09622 509 aaKnown RBP10.69□□□□□ -0.7
SHMT2-224ENST00000556737 ATP1A3P13637 1013 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 HLA-EP13747 358 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 CHRNB2P17787 502 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 SCNN1AP37088 669 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 DHPSP49366 369 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-224ENST00000556737 IRAK1P51617 712 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 POLR2FP61218 127 aaKnown RBP10.69□□□□□ -0.7
SHMT2-224ENST00000556737 CDK17Q00537 523 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 FMO1Q01740 532 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 CAMK2GQ13555 558 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-224ENST00000556737 STARD3Q14849 445 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 IQCB1Q15051 598 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 SYCP1Q15431 976 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 AASDHQ4L235 1098 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-224ENST00000556737 C2CD6Q53TS8 623 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 SPDYCQ5MJ68 293 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 FKBP15Q5T1M5 1219 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 KIAA1324Q6UXG2 1013 aaKnown RBP10.69□□□□□ -0.7
SHMT2-224ENST00000556737 SERPINA13PQ6UXR4 307 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 MMS22LQ6ZRQ5 1243 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 ARMCX6Q7L4S7 300 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 LPCAT2Q7L5N7 544 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 BNIPLQ7Z465 357 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 METTL3Q86U44 580 aaKnown RBP10.69□□□□□ -0.7
SHMT2-224ENST00000556737 CHSY1Q86X52 802 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 CIR1Q86X95 450 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-224ENST00000556737 ZDHHC17Q8IUH5 632 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 SLC41A1Q8IVJ1 513 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 LGI2Q8N0V4 545 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 CFAP52Q8N1V2 620 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 ZNF366Q8N895 744 aa10.69□□□□□ -0.7
SHMT2-224ENST00000556737 C12orf50Q8NA57 414 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms