RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 GPR62Q9BZJ7 368 aa10.39□□□□□ -0.75
EFCAB11-209ENST00000556005 RNF208Q9H0X6 261 aa10.39□□□□□ -0.75
EFCAB11-209ENST00000556005 SMOC2Q9H3U7 446 aa10.39□□□□□ -0.75
EFCAB11-209ENST00000556005 TRABDQ9H4I3 376 aa10.39□□□□□ -0.75
EFCAB11-209ENST00000556005 EIF2B3Q9NR50 452 aaKnown RBP10.39□□□□□ -0.75
EFCAB11-209ENST00000556005 SEPT10Q9P0V9 454 aa10.39□□□□□ -0.75
EFCAB11-209ENST00000556005 SMG5Q9UPR3 1016 aaKnown RBP10.39□□□□□ -0.75
EFCAB11-209ENST00000556005 SCML2Q9UQR0 700 aa10.39□□□□□ -0.75
EFCAB11-209ENST00000556005 FAM47DPA6NHR8 397 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 FOXO6A8MYZ6 492 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 PRPF4O43172 522 aaKnown RBP eCLIP10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 CPP00450 1065 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 AMHP03971 560 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 MAGEA3P43357 314 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 HTRA3P83110 453 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 PPP2R5DQ14738 602 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 LRRC14Q15048 493 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 DDR2Q16832 855 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 GKAP1Q5VSY0 366 aaPredicted RBP10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 SCD5Q86SK9 330 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 TAX1BP1Q86VP1 789 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 MGARPQ8TDB4 240 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 HDAC11Q96DB2 347 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 SERPINB11Q96P15 392 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 VAT1Q99536 393 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 BEGAINQ9BUH8 593 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 ZMYND15Q9H091 742 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 HIPK3Q9H422 1215 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 IGSF9Q9P2J2 1179 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 SFMBT1Q9UHJ3 866 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 NR2E3Q9Y5X4 410 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 COL4A4P53420 1690 aaPredicted RBP10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 IQANK1A0A1B0GTG1 560 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 A0A1W2PQH9 124 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 TBKBP1A7MCY6 615 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 H7C4K7 107 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 GALTP07902 379 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 INHBAP08476 426 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 SRGAP2BP0DMP2 458 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 CPB1P15086 417 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 IFNAR2P48551 515 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 SLC11A1P49279 550 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 ZNF33AQ06730 810 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 GALNT2Q10471 571 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 WASHC5Q12768 1159 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 GPR17Q13304 367 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 MTFR1Q15390 333 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 RWDD4Q6NW29 188 aaKnown RBP10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 FUT10Q6P4F1 479 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 LRRC8BQ6P9F7 803 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 ZNF534Q76KX8 674 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 ANKRD33Q7Z3H0 272 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 CCNJLQ8IV13 435 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 ZNF567Q8N184 647 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 CRIPAKQ8N1N5 446 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 AGGF1Q8N302 714 aaeCLIP10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 PDCD7Q8N8D1 485 aaKnown RBP10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 NETO2Q8NC67 525 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 DCAKDQ8WVC6 231 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 CASP10Q92851 521 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 CFAP36Q96G28 342 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 SCLYQ96I15 445 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 SIGLEC10Q96LC7 697 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 PGLYRP2Q96PD5 576 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 EBNA1BP2Q99848 306 aaKnown RBP10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 SIK2Q9H0K1 926 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 CATSPERBQ9H7T0 1116 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 NMUR1Q9HB89 426 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 SSU72Q9NP77 194 aaKnown RBP10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 MARCH5Q9NX47 278 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 KLHL8Q9P2G9 620 aaPredicted RBP10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 GGA2Q9UJY4 613 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 TRHDEQ9UKU6 1024 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 MAD1L1Q9Y6D9 718 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 NLRC5Q86WI3 1866 aa10.38□□□□□ -0.75
EFCAB11-209ENST00000556005 PTPRDP23468 1912 aa10.37□□□□□ -0.75
EFCAB11-209ENST00000556005 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.37□□□□□ -0.75
EFCAB11-209ENST00000556005 SDR42E2A6NKP2 422 aa10.37□□□□□ -0.75
EFCAB11-209ENST00000556005 FGF10O15520 208 aaPredicted RBP10.37□□□□□ -0.75
EFCAB11-209ENST00000556005 PAGE1O75459 146 aa10.37□□□□□ -0.75
EFCAB11-209ENST00000556005 RTN3O95197 1032 aaPredicted RBP10.37□□□□□ -0.75
EFCAB11-209ENST00000556005 CXCL10P02778 98 aa10.37□□□□□ -0.75
EFCAB11-209ENST00000556005 VIMP08670 466 aaKnown RBP10.37□□□□□ -0.75
EFCAB11-209ENST00000556005 SLC2A3P11169 496 aa10.37□□□□□ -0.75
EFCAB11-209ENST00000556005 CCL5P13501 91 aa10.37□□□□□ -0.75
EFCAB11-209ENST00000556005 DRD4P21917 467 aa10.37□□□□□ -0.75
EFCAB11-209ENST00000556005 PTPN3P26045 913 aa10.37□□□□□ -0.75
EFCAB11-209ENST00000556005 GARSP41250 739 aaKnown RBP10.37□□□□□ -0.75
EFCAB11-209ENST00000556005 GATMP50440 423 aa10.37□□□□□ -0.75
EFCAB11-209ENST00000556005 ATN1P54259 1190 aaPredicted RBP10.37□□□□□ -0.75
EFCAB11-209ENST00000556005 CCL23P55773 120 aa10.37□□□□□ -0.75
EFCAB11-209ENST00000556005 ARPP19P56211 112 aa10.37□□□□□ -0.75
EFCAB11-209ENST00000556005 COG7P83436 770 aa10.37□□□□□ -0.75
EFCAB11-209ENST00000556005 IL9RQ01113 521 aa10.37□□□□□ -0.75
EFCAB11-209ENST00000556005 MPP2Q14168 576 aa10.37□□□□□ -0.75
EFCAB11-209ENST00000556005 EFTUD2Q15029 972 aaKnown RBP eCLIP10.37□□□□□ -0.75
EFCAB11-209ENST00000556005 KBTBD12Q3ZCT8 623 aa10.37□□□□□ -0.75
EFCAB11-209ENST00000556005 LGSNQ5TDP6 509 aa10.37□□□□□ -0.75
EFCAB11-209ENST00000556005 SLC39A5Q6ZMH5 540 aa10.37□□□□□ -0.75
EFCAB11-209ENST00000556005 ANKS3Q6ZW76 656 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms