RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 PLK5Q496M5 336 aa11.05□□□□□ -0.64
SHMT2-213ENST00000554600 FNDC3BQ53EP0 1204 aaKnown RBP11.05□□□□□ -0.64
SHMT2-213ENST00000554600 MS4A13Q5J8X5 152 aa11.05□□□□□ -0.64
SHMT2-213ENST00000554600 SERPINA13PQ6UXR4 307 aa11.05□□□□□ -0.64
SHMT2-213ENST00000554600 SND1Q7KZF4 910 aaKnown RBP eCLIP11.05□□□□□ -0.64
SHMT2-213ENST00000554600 CYB5D2Q8WUJ1 264 aa11.05□□□□□ -0.64
SHMT2-213ENST00000554600 DDX1Q92499 740 aaKnown RBP11.05□□□□□ -0.64
SHMT2-213ENST00000554600 BTN2A3PQ96KV6 586 aa11.05□□□□□ -0.64
SHMT2-213ENST00000554600 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.05□□□□□ -0.64
SHMT2-213ENST00000554600 THAP10Q9P2Z0 257 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-213ENST00000554600 XPO7Q9UIA9 1087 aaKnown RBP11.05□□□□□ -0.64
SHMT2-213ENST00000554600 GGA2Q9UJY4 613 aa11.05□□□□□ -0.64
SHMT2-213ENST00000554600 NOCTQ9UK39 431 aaKnown RBP11.05□□□□□ -0.64
SHMT2-213ENST00000554600 STAP1Q9ULZ2 295 aa11.05□□□□□ -0.64
SHMT2-213ENST00000554600 TP53BP1Q12888 1972 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-213ENST00000554600 LRRC10BA6NIK2 292 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 KCNU1A8MYU2 1149 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 H0Y626 953 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 GFRA2O00451 464 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 NPC1O15118 1278 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 TEX33O43247 280 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 TIMM44O43615 452 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 SERPINC1P01008 464 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 IGLV3-25P01717 112 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 EPHX1P07099 455 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 HLA-EP13747 358 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 CHRNB2P17787 502 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 GABRG2P18507 467 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 BCKDHBP21953 392 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 CD70P32970 193 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 MATKP42679 507 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 IL12RB1P42701 662 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 FMO1Q01740 532 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 CREB5Q02930 508 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 MBLAC2Q68D91 279 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 KIAA1211LQ6NV74 962 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 TRIM72Q6ZMU5 477 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 MMS22LQ6ZRQ5 1243 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 ARMCX6Q7L4S7 300 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 APTXQ7Z2E3 356 aaKnown RBP11.04□□□□□ -0.64
SHMT2-213ENST00000554600 PHLDB2Q86SQ0 1253 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 C11orf74Q86VG3 221 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 CACUL1Q86Y37 369 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 XYLT1Q86Y38 959 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 AHI1Q8N157 1196 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 ZNF557Q8N988 423 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-213ENST00000554600 ZNF397Q8NF99 534 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-213ENST00000554600 SLC30A5Q8TAD4 765 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 WFDC5Q8TCV5 224 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 MYEOVQ96EZ4 313 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 PRICKLE1Q96MT3 831 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-213ENST00000554600 GABRG3Q99928 467 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 C11orf70Q9BRQ4 267 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 IRX2Q9BZI1 471 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-213ENST00000554600 SIK2Q9H0K1 926 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 DUSP15Q9H1R2 295 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-213ENST00000554600 SLC6A17Q9H1V8 727 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 PARD6AQ9NPB6 346 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 RTN4Q9NQC3 1192 aaKnown RBP11.04□□□□□ -0.64
SHMT2-213ENST00000554600 RRN3Q9NYV6 651 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 CALCOCO1Q9P1Z2 691 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 CYP8B1Q9UNU6 501 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 PLA2G4CQ9UP65 541 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 DNAH14Q0VDD8 3507 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 CACNA1EQ15878 2313 aa11.04□□□□□ -0.64
SHMT2-213ENST00000554600 ASCC3Q8N3C0 2202 aaKnown RBP11.04□□□□□ -0.64
SHMT2-213ENST00000554600 A0A1W2PQF6 199 aa11.03□□□□□ -0.64
SHMT2-213ENST00000554600 GOLGA6L19H0YKK7 550 aa11.03□□□□□ -0.64
SHMT2-213ENST00000554600 EPN2O95208 641 aa11.03□□□□□ -0.64
SHMT2-213ENST00000554600 LUC7L3O95232 432 aaKnown RBP11.03□□□□□ -0.64
SHMT2-213ENST00000554600 MOCS3O95396 460 aa11.03□□□□□ -0.64
SHMT2-213ENST00000554600 ATP5BP06576 529 aaKnown RBP11.03□□□□□ -0.64
SHMT2-213ENST00000554600 CCDC172P0C7W6 258 aa11.03□□□□□ -0.64
SHMT2-213ENST00000554600 FERP16591 822 aa11.03□□□□□ -0.64
SHMT2-213ENST00000554600 NDUFV2P19404 249 aa11.03□□□□□ -0.64
SHMT2-213ENST00000554600 GGCXP38435 758 aa11.03□□□□□ -0.64
SHMT2-213ENST00000554600 P2RY2P41231 377 aa11.03□□□□□ -0.64
SHMT2-213ENST00000554600 NSFP46459 744 aaKnown RBP11.03□□□□□ -0.64
SHMT2-213ENST00000554600 GABRB2P47870 512 aa11.03□□□□□ -0.64
SHMT2-213ENST00000554600 NUMBP49757 651 aa11.03□□□□□ -0.64
SHMT2-213ENST00000554600 LMNB2Q03252 620 aa11.03□□□□□ -0.64
SHMT2-213ENST00000554600 DEUP1Q05D60 604 aa11.03□□□□□ -0.64
SHMT2-213ENST00000554600 LMAN2Q12907 356 aa11.03□□□□□ -0.64
SHMT2-213ENST00000554600 SKOR2Q2VWA4 1001 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-213ENST00000554600 RABGAP1LQ5R372 815 aa11.03□□□□□ -0.64
SHMT2-213ENST00000554600 MPP7Q5T2T1 576 aa11.03□□□□□ -0.64
SHMT2-213ENST00000554600 TMEM215Q68D42 235 aa11.03□□□□□ -0.64
SHMT2-213ENST00000554600 FRMD1Q8N878 549 aa11.03□□□□□ -0.64
SHMT2-213ENST00000554600 ZNF366Q8N895 744 aa11.03□□□□□ -0.64
SHMT2-213ENST00000554600 C12orf50Q8NA57 414 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-213ENST00000554600 LOXL4Q96JB6 756 aa11.03□□□□□ -0.64
SHMT2-213ENST00000554600 ZC3H10Q96K80 434 aaKnown RBP11.03□□□□□ -0.64
SHMT2-213ENST00000554600 RPRD1AQ96P16 312 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-213ENST00000554600 TBCBQ99426 244 aa11.03□□□□□ -0.64
SHMT2-213ENST00000554600 WDCPQ9H6R7 721 aa11.03□□□□□ -0.64
SHMT2-213ENST00000554600 CBX8Q9HC52 389 aa11.03□□□□□ -0.64
SHMT2-213ENST00000554600 METTL5Q9NRN9 209 aaKnown RBP11.03□□□□□ -0.64
SHMT2-213ENST00000554600 SEMA4GQ9NTN9 838 aa11.03□□□□□ -0.64
SHMT2-213ENST00000554600 PAXBP1Q9Y5B6 917 aa11.03□□□□□ -0.64
SHMT2-213ENST00000554600 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms