RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 GPR149Q86SP6 731 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 FAM131BQ86XD5 332 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 MIB1Q86YT6 1006 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 TMC8Q8IU68 726 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 HSPH1Q92598 858 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 ALG3Q92685 438 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 AZIN2Q96A70 460 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 SLC39A13Q96H72 371 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 BTN2A3PQ96KV6 586 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 EPAS1Q99814 870 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 ZNF670Q9BS34 389 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 RTKNQ9BST9 563 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 SNRNP25Q9BV90 132 aaKnown RBP9.85□□□□□ -0.83
YBX3-215ENST00000544504 MAK16Q9BXY0 300 aaKnown RBP9.85□□□□□ -0.83
YBX3-215ENST00000544504 LRRC3Q9BY71 257 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 OSBPL8Q9BZF1 889 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 OSBPL2Q9H1P3 480 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 DHX35Q9H5Z1 703 aaKnown RBP9.85□□□□□ -0.83
YBX3-215ENST00000544504 CCSER2Q9H7U1 834 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 L2HGDHQ9H9P8 463 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 TBC1D17Q9HA65 648 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 ZNF334Q9HCZ1 680 aaPredicted RBP9.85□□□□□ -0.83
YBX3-215ENST00000544504 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.85□□□□□ -0.83
YBX3-215ENST00000544504 OSER1Q9NX31 292 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 ARHGEF38Q9NXL2 777 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 COX16Q9P0S2 106 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 DLGAP2Q9P1A6 1054 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 STIM2Q9P246 746 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 LSM7Q9UK45 103 aaKnown RBP9.85□□□□□ -0.83
YBX3-215ENST00000544504 FZD10Q9ULW2 581 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 ZNF510Q9Y2H8 683 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 SIT1Q9Y3P8 196 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 FANCGO15287 622 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 ZZEF1O43149 2961 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 COCHO43405 550 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 NARSO43776 548 aaKnown RBP9.84□□□□□ -0.83
YBX3-215ENST00000544504 TADA3O75528 432 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 RFPL2O75678 378 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 ZNF189O75820 626 aaPredicted RBP9.84□□□□□ -0.83
YBX3-215ENST00000544504 OLFM2O95897 454 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 IGLV3-27P01718 113 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 CKMP06732 381 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 DCNP07585 359 aaKnown RBP9.84□□□□□ -0.83
YBX3-215ENST00000544504 PYGMP11217 842 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 MBL2P11226 248 aaPredicted RBP9.84□□□□□ -0.83
YBX3-215ENST00000544504 HDCP19113 662 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 TFE3P19532 575 aaPredicted RBP9.84□□□□□ -0.83
YBX3-215ENST00000544504 IL1R2P27930 398 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 L1CAMP32004 1257 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 CXCR5P32302 372 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 MARCKSL1P49006 195 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 HCAR3P49019 387 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 SLC11A2P49281 568 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 SLC7A9P82251 487 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 NRG1Q02297 640 aaPredicted RBP9.84□□□□□ -0.83
YBX3-215ENST00000544504 TAZQ16635 292 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 LONRF2Q1L5Z9 754 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 SMTNL2Q2TAL5 461 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 ZNF528Q3MIS6 628 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 ZC3H12AQ5D1E8 599 aaKnown RBP9.84□□□□□ -0.83
YBX3-215ENST00000544504 LRRC31Q6UY01 552 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 SPOCD1Q6ZMY3 1216 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 GAREM2Q75VX8 874 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 BZW1Q7L1Q6 419 aaKnown RBP9.84□□□□□ -0.83
YBX3-215ENST00000544504 TMEM150AQ86TG1 271 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 CREG2Q8IUH2 290 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 HS6ST3Q8IZP7 471 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 TTC13Q8NBP0 860 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 ADAM32Q8TC27 787 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 FAM71BQ8TC56 605 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.84□□□□□ -0.83
YBX3-215ENST00000544504 ZNF707Q96C28 371 aaPredicted RBP9.84□□□□□ -0.83
YBX3-215ENST00000544504 FCRL2Q96LA5 508 aaPredicted RBP9.84□□□□□ -0.83
YBX3-215ENST00000544504 C1orf74Q96LT6 269 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 RUNDC3BQ96NL0 473 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 PEBP4Q96S96 227 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 PSMB7Q99436 277 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 CALN1Q9BXU9 219 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 FRMD8P1Q9BZ68 369 aaPredicted RBP9.84□□□□□ -0.83
YBX3-215ENST00000544504 TKTL2Q9H0I9 626 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 RETREG1Q9H6L5 497 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 TASP1Q9H6P5 420 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 PCDH18Q9HCL0 1135 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 TRPC7Q9HCX4 862 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 RRAGDQ9NQL2 400 aaPredicted RBP9.84□□□□□ -0.83
YBX3-215ENST00000544504 DNMT3BQ9UBC3 853 aaKnown RBP9.84□□□□□ -0.83
YBX3-215ENST00000544504 SFMBT1Q9UHJ3 866 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 MRPS23Q9Y3D9 190 aaKnown RBP9.84□□□□□ -0.83
YBX3-215ENST00000544504 ATRXP46100 2492 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 MYO10Q9HD67 2058 aa9.84□□□□□ -0.83
YBX3-215ENST00000544504 A0A1W2PRU2 124 aa9.83□□□□□ -0.84
YBX3-215ENST00000544504 CTAGE15A4D2H0 777 aa9.83□□□□□ -0.84
YBX3-215ENST00000544504 KCNU1A8MYU2 1149 aa9.83□□□□□ -0.84
YBX3-215ENST00000544504 CCDC188H7C350 402 aa9.83□□□□□ -0.84
YBX3-215ENST00000544504 MSI1O43347 362 aaKnown RBP9.83□□□□□ -0.84
YBX3-215ENST00000544504 FGGP02679 453 aa9.83□□□□□ -0.84
YBX3-215ENST00000544504 CTAGE8P0CG41 777 aa9.83□□□□□ -0.84
YBX3-215ENST00000544504 SRFP11831 508 aa9.83□□□□□ -0.84
YBX3-215ENST00000544504 TCF4P15884 667 aa9.83□□□□□ -0.84
YBX3-215ENST00000544504 WEE1P30291 646 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms