RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 TAF12Q16514 161 aa12.96□□□□□ -0.34
DDX55-206ENST00000539934 EXOC3L4Q17RC7 722 aa12.96□□□□□ -0.34
DDX55-206ENST00000539934 EEPD1Q7L9B9 569 aa12.96□□□□□ -0.34
DDX55-206ENST00000539934 ANKRD33Q7Z3H0 272 aa12.96□□□□□ -0.34
DDX55-206ENST00000539934 JAZF1Q86VZ6 243 aa12.96□□□□□ -0.34
DDX55-206ENST00000539934 ZNF677Q86XU0 584 aa12.96□□□□□ -0.34
DDX55-206ENST00000539934 SLC35C1Q96A29 364 aa12.96□□□□□ -0.34
DDX55-206ENST00000539934 HSPBAP1Q96EW2 488 aa12.96□□□□□ -0.34
DDX55-206ENST00000539934 IMPG2Q9BZV3 1241 aa12.96□□□□□ -0.34
DDX55-206ENST00000539934 ZNF302Q9NR11 478 aa12.96□□□□□ -0.34
DDX55-206ENST00000539934 TBX21Q9UL17 535 aa12.96□□□□□ -0.34
DDX55-206ENST00000539934 PNMA8BQ9ULN7 279 aaPredicted RBP12.96□□□□□ -0.34
DDX55-206ENST00000539934 REXO2Q9Y3B8 237 aaKnown RBP12.96□□□□□ -0.34
DDX55-206ENST00000539934 IGSF9BQ9UPX0 1349 aa12.95□□□□□ -0.34
DDX55-206ENST00000539934 MCM3APO60318 1980 aa12.95□□□□□ -0.34
DDX55-206ENST00000539934 TRAPPC3O43617 180 aa12.95□□□□□ -0.34
DDX55-206ENST00000539934 DGAT1O75907 488 aa12.95□□□□□ -0.34
DDX55-206ENST00000539934 NOL4O94818 638 aa12.95□□□□□ -0.34
DDX55-206ENST00000539934 HMGN1P05114 100 aa12.95□□□□□ -0.34
DDX55-206ENST00000539934 HNRNPFP52597 415 aaKnown RBP12.95□□□□□ -0.34
DDX55-206ENST00000539934 NCKAP1LP55160 1127 aa12.95□□□□□ -0.34
DDX55-206ENST00000539934 GTF2BQ00403 316 aa12.95□□□□□ -0.34
DDX55-206ENST00000539934 GUCY1A3Q02108 690 aa12.95□□□□□ -0.34
DDX55-206ENST00000539934 TGFBIQ15582 683 aa12.95□□□□□ -0.34
DDX55-206ENST00000539934 NPTX1Q15818 432 aa12.95□□□□□ -0.34
DDX55-206ENST00000539934 XKR3Q5GH77 459 aa12.95□□□□□ -0.34
DDX55-206ENST00000539934 CPLX4Q7Z7G2 160 aa12.95□□□□□ -0.34
DDX55-206ENST00000539934 TICAM1Q8IUC6 712 aa12.95□□□□□ -0.34
DDX55-206ENST00000539934 GPIHBP1Q8IV16 184 aa12.95□□□□□ -0.34
DDX55-206ENST00000539934 ST13P4Q8IZP2 240 aaPredicted RBP12.95□□□□□ -0.34
DDX55-206ENST00000539934 GALNT11Q8NCW6 608 aa12.95□□□□□ -0.34
DDX55-206ENST00000539934 SEPT1Q8WYJ6 367 aa12.95□□□□□ -0.34
DDX55-206ENST00000539934 STK33Q9BYT3 514 aa12.95□□□□□ -0.34
DDX55-206ENST00000539934 ST6GALNAC4Q9H4F1 302 aa12.95□□□□□ -0.34
DDX55-206ENST00000539934 EPHX3Q9H6B9 360 aa12.95□□□□□ -0.34
DDX55-206ENST00000539934 RNF112Q9ULX5 631 aa12.95□□□□□ -0.34
DDX55-206ENST00000539934 COQ6Q9Y2Z9 468 aa12.95□□□□□ -0.34
DDX55-206ENST00000539934 GBF1Q92538 1859 aa12.95□□□□□ -0.34
DDX55-206ENST00000539934 SYNGAP1Q96PV0 1343 aa12.95□□□□□ -0.34
DDX55-206ENST00000539934 TYW5A2RUC4 315 aaKnown RBP12.94□□□□□ -0.34
DDX55-206ENST00000539934 GREM1O60565 184 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 ITGB1P05556 798 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 ASGR1P07306 291 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 PLEKP08567 350 aaPredicted RBP12.94□□□□□ -0.34
DDX55-206ENST00000539934 PAEPP09466 180 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 MSH2P43246 934 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 CCL23P55773 120 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 NAA20P61599 178 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 OCRLQ01968 901 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 RFTN1Q14699 578 aaPredicted RBP12.94□□□□□ -0.34
DDX55-206ENST00000539934 SPA17Q15506 151 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 CCDC58Q4VC31 144 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 TDRD12Q587J7 1177 aaKnown RBP12.94□□□□□ -0.34
DDX55-206ENST00000539934 ZNF569Q5MCW4 686 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 IQSEC1Q6DN90 963 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 STK32CQ86UX6 486 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 NPAS4Q8IUM7 802 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 SLC9A9Q8IVB4 645 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 CDH26Q8IXH8 852 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 MCPH1Q8NEM0 835 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 OR52K2Q8NGK3 314 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 MGARPQ8TDB4 240 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 NOX5Q96PH1 765 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 CDRT15Q96T59 188 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 MNTQ99583 582 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 CCDC106Q9BWC9 280 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 AP1M1Q9BXS5 423 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 SLC28A3Q9HAS3 691 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 ATP13A1Q9HD20 1204 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 CYP26B1Q9NR63 512 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 DMAC2Q9NW81 257 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 ASNSD1Q9NWL6 643 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 SENP1Q9P0U3 644 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 ARHGAP20Q9P2F6 1191 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 MAPRE3Q9UPY8 281 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 ZNF236Q9UL36 1845 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 TRIM77I1YAP6 450 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 ENC1O14682 589 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 STBD1O95210 358 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 SLC9A1P19634 815 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 NR1D1P20393 614 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 TARSP26639 723 aaKnown RBP12.94□□□□□ -0.34
DDX55-206ENST00000539934 PBLDP30039 288 aaPredicted RBP12.94□□□□□ -0.34
DDX55-206ENST00000539934 RAD23BP54727 409 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 SRP54P61011 504 aaKnown RBP12.94□□□□□ -0.34
DDX55-206ENST00000539934 CYP4F2P78329 520 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 BEX3Q00994 111 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 CYP4F3Q08477 520 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 C19orf57Q0VDD7 668 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 ZER1Q7Z7L7 766 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 HID1Q8IV36 788 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 IFT20Q8IY31 132 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 RDH13Q8NBN7 331 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 OR6C4Q8NGE1 309 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 NCLNQ969V3 563 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 GLT1D1Q96MS3 346 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 PIP5K1AQ99755 562 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 PCIF1Q9H4Z3 704 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 GCNT4Q9P109 453 aa12.94□□□□□ -0.34
DDX55-206ENST00000539934 GUCA1BQ9UMX6 200 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms