RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 TBL1XO60907 577 aa18.53■□□□□ 0.56
TNFRSF1A-209ENST00000536717 HSF2BPO75031 334 aa18.53■□□□□ 0.56
TNFRSF1A-209ENST00000536717 GRAP2O75791 330 aa18.53■□□□□ 0.56
TNFRSF1A-209ENST00000536717 MOCS2O96007 188 aaPredicted RBP18.53■□□□□ 0.56
TNFRSF1A-209ENST00000536717 ZNF806P0C7X5 589 aa18.53■□□□□ 0.56
TNFRSF1A-209ENST00000536717 NDUFV2P19404 249 aa18.53■□□□□ 0.56
TNFRSF1A-209ENST00000536717 MPLP40238 635 aa18.53■□□□□ 0.56
TNFRSF1A-209ENST00000536717 STAT1P42224 750 aa18.53■□□□□ 0.56
TNFRSF1A-209ENST00000536717 JAM2P57087 298 aa18.53■□□□□ 0.56
TNFRSF1A-209ENST00000536717 ARHGAP8P85298 464 aa18.53■□□□□ 0.56
TNFRSF1A-209ENST00000536717 ZNF234Q14588 700 aa18.53■□□□□ 0.56
TNFRSF1A-209ENST00000536717 ZC3H12AQ5D1E8 599 aaKnown RBP18.53■□□□□ 0.56
TNFRSF1A-209ENST00000536717 EFHC1Q5JVL4 640 aa18.53■□□□□ 0.56
TNFRSF1A-209ENST00000536717 OR6B2Q6IFH4 312 aa18.53■□□□□ 0.56
TNFRSF1A-209ENST00000536717 NOP9Q86U38 636 aaKnown RBP18.53■□□□□ 0.56
TNFRSF1A-209ENST00000536717 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.53■□□□□ 0.56
TNFRSF1A-209ENST00000536717 CIPCQ9C0C6 399 aa18.53■□□□□ 0.56
TNFRSF1A-209ENST00000536717 ABCB8Q9NUT2 735 aa18.53■□□□□ 0.56
TNFRSF1A-209ENST00000536717 MBD1Q9UIS9 605 aaPredicted RBP18.53■□□□□ 0.56
TNFRSF1A-209ENST00000536717 CEP83Q9Y592 693 aa18.53■□□□□ 0.56
TNFRSF1A-209ENST00000536717 SOX5P35711 763 aa18.52■□□□□ 0.56
TNFRSF1A-209ENST00000536717 SLC6A3Q01959 620 aa18.52■□□□□ 0.56
TNFRSF1A-209ENST00000536717 TRIM14Q14142 442 aa18.52■□□□□ 0.56
TNFRSF1A-209ENST00000536717 PUM1Q14671 1186 aaKnown RBP eCLIP18.52■□□□□ 0.56
TNFRSF1A-209ENST00000536717 SF3A2Q15428 464 aaKnown RBP18.52■□□□□ 0.56
TNFRSF1A-209ENST00000536717 MS4A13Q5J8X5 152 aa18.52■□□□□ 0.56
TNFRSF1A-209ENST00000536717 TAF3Q5VWG9 929 aa18.52■□□□□ 0.56
TNFRSF1A-209ENST00000536717 SLC26A9Q7LBE3 791 aa18.52■□□□□ 0.56
TNFRSF1A-209ENST00000536717 ADIPOR2Q86V24 386 aa18.52■□□□□ 0.56
TNFRSF1A-209ENST00000536717 TMEM35BQ8NCS4 154 aa18.52■□□□□ 0.56
TNFRSF1A-209ENST00000536717 ZNF397Q8NF99 534 aaPredicted RBP18.52■□□□□ 0.56
TNFRSF1A-209ENST00000536717 EPS8L1Q8TE68 723 aa18.52■□□□□ 0.56
TNFRSF1A-209ENST00000536717 SPACA7Q96KW9 195 aa18.52■□□□□ 0.56
TNFRSF1A-209ENST00000536717 TTYH3Q9C0H2 523 aa18.52■□□□□ 0.56
TNFRSF1A-209ENST00000536717 SLC6A17Q9H1V8 727 aa18.52■□□□□ 0.56
TNFRSF1A-209ENST00000536717 SMOC1Q9H4F8 434 aa18.52■□□□□ 0.56
TNFRSF1A-209ENST00000536717 GRPEL1Q9HAV7 217 aa18.52■□□□□ 0.56
TNFRSF1A-209ENST00000536717 MYO6Q9UM54 1294 aa18.52■□□□□ 0.56
TNFRSF1A-209ENST00000536717 DOCK4Q8N1I0 1966 aa18.52■□□□□ 0.56
TNFRSF1A-209ENST00000536717 NYNRINQ9P2P1 1898 aaKnown RBP18.52■□□□□ 0.55
TNFRSF1A-209ENST00000536717 A0A1W2PQJ5 194 aa18.51■□□□□ 0.55
TNFRSF1A-209ENST00000536717 BCLAF3A2AJT9 711 aaKnown RBP18.51■□□□□ 0.55
TNFRSF1A-209ENST00000536717 GDF9O60383 454 aa18.51■□□□□ 0.55
TNFRSF1A-209ENST00000536717 APOEP02649 317 aa18.51■□□□□ 0.55
TNFRSF1A-209ENST00000536717 TPM1P09493 284 aa18.51■□□□□ 0.55
TNFRSF1A-209ENST00000536717 PABPC1P11940 636 aaKnown RBP18.51■□□□□ 0.55
TNFRSF1A-209ENST00000536717 RPS24P62847 133 aaKnown RBP18.51■□□□□ 0.55
TNFRSF1A-209ENST00000536717 CREB5Q02930 508 aa18.51■□□□□ 0.55
TNFRSF1A-209ENST00000536717 CHST9Q7L1S5 443 aa18.51■□□□□ 0.55
TNFRSF1A-209ENST00000536717 HJURPQ8NCD3 748 aaPredicted RBP18.51■□□□□ 0.55
TNFRSF1A-209ENST00000536717 WFIKKN2Q8TEU8 576 aa18.51■□□□□ 0.55
TNFRSF1A-209ENST00000536717 LMLNQ96KR4 655 aa18.51■□□□□ 0.55
TNFRSF1A-209ENST00000536717 MRGPRX1Q96LB2 322 aa18.51■□□□□ 0.55
TNFRSF1A-209ENST00000536717 DDX50Q9BQ39 737 aaKnown RBP18.51■□□□□ 0.55
TNFRSF1A-209ENST00000536717 STIM2Q9P246 746 aa18.51■□□□□ 0.55
TNFRSF1A-209ENST00000536717 GGA2Q9UJY4 613 aa18.51■□□□□ 0.55
TNFRSF1A-209ENST00000536717 ADAMTS9Q9P2N4 1935 aa18.51■□□□□ 0.55
TNFRSF1A-209ENST00000536717 TIMM44O43615 452 aa18.5■□□□□ 0.55
TNFRSF1A-209ENST00000536717 GFPT2O94808 682 aa18.5■□□□□ 0.55
TNFRSF1A-209ENST00000536717 CCDC172P0C7W6 258 aa18.5■□□□□ 0.55
TNFRSF1A-209ENST00000536717 PRKCHP24723 683 aa18.5■□□□□ 0.55
TNFRSF1A-209ENST00000536717 CD70P32970 193 aa18.5■□□□□ 0.55
TNFRSF1A-209ENST00000536717 GABRB2P47870 512 aa18.5■□□□□ 0.55
TNFRSF1A-209ENST00000536717 SNX16P57768 344 aa18.5■□□□□ 0.55
TNFRSF1A-209ENST00000536717 CDK17Q00537 523 aa18.5■□□□□ 0.55
TNFRSF1A-209ENST00000536717 FUT11Q495W5 492 aa18.5■□□□□ 0.55
TNFRSF1A-209ENST00000536717 TMC6Q7Z403 805 aa18.5■□□□□ 0.55
TNFRSF1A-209ENST00000536717 AHI1Q8N157 1196 aa18.5■□□□□ 0.55
TNFRSF1A-209ENST00000536717 CPLX3Q8WVH0 158 aa18.5■□□□□ 0.55
TNFRSF1A-209ENST00000536717 BAP1Q92560 729 aa18.5■□□□□ 0.55
TNFRSF1A-209ENST00000536717 BTN2A3PQ96KV6 586 aa18.5■□□□□ 0.55
TNFRSF1A-209ENST00000536717 MKRN2Q9H000 416 aaKnown RBP18.5■□□□□ 0.55
TNFRSF1A-209ENST00000536717 PDCL3Q9H2J4 239 aa18.5■□□□□ 0.55
TNFRSF1A-209ENST00000536717 SYNCQ9H7C4 482 aa18.5■□□□□ 0.55
TNFRSF1A-209ENST00000536717 FAM204AQ9H8W3 233 aa18.5■□□□□ 0.55
TNFRSF1A-209ENST00000536717 CD93Q9NPY3 652 aa18.5■□□□□ 0.55
TNFRSF1A-209ENST00000536717 RXFP3Q9NSD7 469 aa18.5■□□□□ 0.55
TNFRSF1A-209ENST00000536717 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.5■□□□□ 0.55
TNFRSF1A-209ENST00000536717 DDIT4Q9NX09 232 aa18.5■□□□□ 0.55
TNFRSF1A-209ENST00000536717 CAPN11Q9UMQ6 739 aa18.5■□□□□ 0.55
TNFRSF1A-209ENST00000536717 CACNA1EQ15878 2313 aa18.5■□□□□ 0.55
TNFRSF1A-209ENST00000536717 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 FAM170AA1A519 330 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 KCNU1A8MYU2 1149 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 FOXD2O60548 495 aaPredicted RBP18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 DAB1O75553 588 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 ADCY5O95622 1261 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 GYPCP04921 128 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 MMEP08473 750 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 BYSLQ13895 437 aaKnown RBP18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 STARD3Q14849 445 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 RAP1GAP2Q684P5 730 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 ZDHHC17Q8IUH5 632 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 MFN1Q8IWA4 741 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 TMEFF1Q8IYR6 380 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 CFAP52Q8N1V2 620 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 FIBINQ8TAL6 211 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 CYB5D2Q8WUJ1 264 aa18.49■□□□□ 0.55
TNFRSF1A-209ENST00000536717 ADAM33Q9BZ11 813 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms