RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 PPP1R13BQ96KQ4 1090 aa9.19□□□□□ -0.94
CHD4-204ENST00000535810 SPACA7Q96KW9 195 aa9.19□□□□□ -0.94
CHD4-204ENST00000535810 PRICKLE1Q96MT3 831 aaPredicted RBP9.19□□□□□ -0.94
CHD4-204ENST00000535810 LSM14BQ9BX40 385 aaKnown RBP9.19□□□□□ -0.94
CHD4-204ENST00000535810 NAA15Q9BXJ9 866 aaKnown RBP9.19□□□□□ -0.94
CHD4-204ENST00000535810 LHX5Q9H2C1 402 aa9.19□□□□□ -0.94
CHD4-204ENST00000535810 SMOC1Q9H4F8 434 aa9.19□□□□□ -0.94
CHD4-204ENST00000535810 POPDC2Q9HBU9 364 aa9.19□□□□□ -0.94
CHD4-204ENST00000535810 MBD1Q9UIS9 605 aaPredicted RBP9.19□□□□□ -0.94
CHD4-204ENST00000535810 RAD54BQ9Y620 910 aa9.19□□□□□ -0.94
CHD4-204ENST00000535810 STON1Q9Y6Q2 735 aa9.19□□□□□ -0.94
CHD4-204ENST00000535810 RALGAPA1Q6GYQ0 2036 aa9.19□□□□□ -0.94
CHD4-204ENST00000535810 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.18□□□□□ -0.94
CHD4-204ENST00000535810 GOLGA6L7A0A1B0GV03 622 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 BCLAF3A2AJT9 711 aaKnown RBP9.18□□□□□ -0.94
CHD4-204ENST00000535810 WASH3PC4AMC7 463 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 F8VZ95 297 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 NPC1O15118 1278 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 IRAK2O43187 625 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 ACSL4O60488 711 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 FOXD2O60548 495 aaPredicted RBP9.18□□□□□ -0.94
CHD4-204ENST00000535810 TRUB2O95900 331 aaKnown RBP9.18□□□□□ -0.94
CHD4-204ENST00000535810 ERBB2P04626 1255 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 ZNF806P0C7X5 589 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 CYP11B1P15538 503 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 KRT9P35527 623 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 IL12RB1P42701 662 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 PITX1P78337 314 aaPredicted RBP9.18□□□□□ -0.94
CHD4-204ENST00000535810 CREB5Q02930 508 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 KRT31Q15323 416 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 SF3A2Q15428 464 aaKnown RBP9.18□□□□□ -0.94
CHD4-204ENST00000535810 STX1AQ16623 288 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 PTPN20Q4JDL3 420 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 PPM1JQ5JR12 505 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 MPP7Q5T2T1 576 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 CCDC183Q5T5S1 534 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 PIK3R6Q5UE93 754 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 TCEAL6Q6IPX3 200 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 SASS6Q6UVJ0 657 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 OLFML1Q6UWY5 402 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 FAM183BPQ6ZVS7 135 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 SETXQ7Z333 2677 aaKnown RBP9.18□□□□□ -0.94
CHD4-204ENST00000535810 PGBD3Q8N328 593 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.18□□□□□ -0.94
CHD4-204ENST00000535810 WFDC5Q8TCV5 224 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 NETO1Q8TDF5 533 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 UCMAQ8WVF2 138 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 SORCS1Q8WY21 1168 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 TCEAL3Q969E4 200 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 MYEOVQ96EZ4 313 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 MRGPRX1Q96LB2 322 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 NOX5Q96PH1 765 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 SLC2A13Q96QE2 648 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 IRX2Q9BZI1 471 aaPredicted RBP9.18□□□□□ -0.94
CHD4-204ENST00000535810 CIPCQ9C0C6 399 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 NUCKS1Q9H1E3 243 aaKnown RBP9.18□□□□□ -0.94
CHD4-204ENST00000535810 PLCB1Q9NQ66 1216 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 VPS45Q9NRW7 570 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 RXFP3Q9NSD7 469 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 ABCB8Q9NUT2 735 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 ANO10Q9NW15 660 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 FANCLQ9NW38 375 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 ASNSD1Q9NWL6 643 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 ELOVL2Q9NXB9 296 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 THAP10Q9P2Z0 257 aaPredicted RBP9.18□□□□□ -0.94
CHD4-204ENST00000535810 XPO7Q9UIA9 1087 aaKnown RBP9.18□□□□□ -0.94
CHD4-204ENST00000535810 ANGPTL2Q9UKU9 493 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 PLXND1Q9Y4D7 1925 aa9.18□□□□□ -0.94
CHD4-204ENST00000535810 MUC22E2RYF6 1773 aaPredicted RBP9.17□□□□□ -0.94
CHD4-204ENST00000535810 FRYQ5TBA9 3013 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 FLNBO75369 2602 aaKnown RBP9.17□□□□□ -0.94
CHD4-204ENST00000535810 SLC30A4O14863 429 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 TIMM44O43615 452 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 GDF9O60383 454 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 TBL1XO60907 577 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 HSF2BPO75031 334 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 GRAP2O75791 330 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 CAVIN2O95810 425 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 MOCS2O96007 188 aaPredicted RBP9.17□□□□□ -0.94
CHD4-204ENST00000535810 APOEP02649 317 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 GLI1P08151 1106 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 PRKCHP24723 683 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 CD70P32970 193 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 CDH5P33151 784 aaPredicted RBP9.17□□□□□ -0.94
CHD4-204ENST00000535810 PTGER3P43115 390 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 KLK7P49862 253 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 BPIFB4P59827 614 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 RPS24P62847 133 aaKnown RBP9.17□□□□□ -0.94
CHD4-204ENST00000535810 MYL5Q02045 173 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 EIF4EBP2Q13542 120 aaPredicted RBP9.17□□□□□ -0.94
CHD4-204ENST00000535810 BYSLQ13895 437 aaKnown RBP9.17□□□□□ -0.94
CHD4-204ENST00000535810 ZNF234Q14588 700 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 STARD3Q14849 445 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 QPCTQ16769 361 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 FUT11Q495W5 492 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 DCAF6Q58WW2 860 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 ZC3H12AQ5D1E8 599 aaKnown RBP9.17□□□□□ -0.94
CHD4-204ENST00000535810 MS4A13Q5J8X5 152 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 LPCAT2Q7L5N7 544 aa9.17□□□□□ -0.94
CHD4-204ENST00000535810 CYP2U1Q7Z449 544 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms