RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 GAB1Q13480 694 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 TDGQ13569 410 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 CBFBQ13951 182 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 TIGD2Q4W5G0 525 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 USP39Q53GS9 565 aaKnown RBP3.3□□□□□ -1.88
CD44-234ENST00000531873 RNASE12Q5GAN4 147 aaKnown RBP3.3□□□□□ -1.88
CD44-234ENST00000531873 SPDYAQ5MJ70 313 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 SNX30Q5VWJ9 437 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 FAM205BPQ63HN1 556 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 HAUS3Q68CZ6 603 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 TBC1D3GQ6DHY5 549 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 TBC1D3CQ6IPX1 549 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 USP51Q70EK9 711 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 R3HCC1LQ7Z5L2 792 aaKnown RBP3.3□□□□□ -1.88
CD44-234ENST00000531873 ARMC8Q8IUR7 673 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 C1orf210Q8IVY1 113 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 PALM2Q8IXS6 379 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 TBC1D3Q8IZP1 549 aaPredicted RBP3.3□□□□□ -1.88
CD44-234ENST00000531873 LINC01465Q8N7H1 131 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 ANKRD44Q8N8A2 993 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 ZMIZ2Q8NF64 920 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 RP9Q8TA86 221 aaKnown RBP3.3□□□□□ -1.88
CD44-234ENST00000531873 TFAP2BQ92481 460 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 EDC3Q96F86 508 aaKnown RBP3.3□□□□□ -1.88
CD44-234ENST00000531873 RSRC1Q96IZ7 334 aaKnown RBP3.3□□□□□ -1.88
CD44-234ENST00000531873 Q96MF0 132 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 PPP1R10Q96QC0 940 aaKnown RBP3.3□□□□□ -1.88
CD44-234ENST00000531873 SNX18Q96RF0 628 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 LBHD1Q9BQE6 289 aaPredicted RBP3.3□□□□□ -1.88
CD44-234ENST00000531873 THAP7Q9BT49 309 aaPredicted RBP3.3□□□□□ -1.88
CD44-234ENST00000531873 MLST8Q9BVC4 326 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 SLC25A18Q9H1K4 315 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 TAOK3Q9H2K8 898 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 MROH8Q9H579 483 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 SYNPO2LQ9H987 977 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 PDE11AQ9HCR9 933 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 SEMA4BQ9NPR2 832 aaPredicted RBP3.3□□□□□ -1.88
CD44-234ENST00000531873 SMYD2Q9NRG4 433 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 DUSP22Q9NRW4 184 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 ABHD10Q9NUJ1 306 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 PARPBPQ9NWS1 579 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 DLL3Q9NYJ7 618 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 SLC25A10Q9UBX3 287 aaPredicted RBP3.3□□□□□ -1.88
CD44-234ENST00000531873 CD207Q9UJ71 328 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 TESMINQ9Y4I5 508 aa3.3□□□□□ -1.88
CD44-234ENST00000531873 TDRD9Q8NDG6 1382 aaKnown RBP3.29□□□□□ -1.88
CD44-234ENST00000531873 PIPSLA2A3N6 862 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 C3orf70A6NLC5 250 aaPredicted RBP3.29□□□□□ -1.88
CD44-234ENST00000531873 C17orf100A8MU93 164 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 H0YIZ8 118 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 CES2O00748 559 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 MLYCDO95822 493 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 ALDOAP04075 364 aaKnown RBP3.29□□□□□ -1.88
CD44-234ENST00000531873 ELFN1P0C7U0 828 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 NR2F6P10588 404 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 ARSAP15289 507 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 ZNF37AP17032 561 aaPredicted RBP3.29□□□□□ -1.88
CD44-234ENST00000531873 ENGP17813 658 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 EPHA8P29322 1005 aaPredicted RBP3.29□□□□□ -1.88
CD44-234ENST00000531873 AVPR2P30518 371 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 MAPK4P31152 587 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 FOLR3P41439 243 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 POLD2P49005 469 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 MVDP53602 400 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 RPP30P78346 268 aaKnown RBP3.29□□□□□ -1.88
CD44-234ENST00000531873 B4GALNT1Q00973 533 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 CCDC15Q0P6D6 951 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 TBL3Q12788 808 aaKnown RBP3.29□□□□□ -1.88
CD44-234ENST00000531873 PTP4A2Q12974 167 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 BMPR2Q13873 1038 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 PDE1CQ14123 709 aaPredicted RBP3.29□□□□□ -1.88
CD44-234ENST00000531873 TBCEQ15813 527 aaPredicted RBP3.29□□□□□ -1.88
CD44-234ENST00000531873 UBAP2Q5T6F2 1119 aaKnown RBP3.29□□□□□ -1.88
CD44-234ENST00000531873 NAA35Q5VZE5 725 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 ITPRIPL1Q6GPH6 555 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 WDR93Q6P2C0 686 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 KIRREL2Q6UWL6 708 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 KYAT3Q6YP21 454 aaKnown RBP3.29□□□□□ -1.88
CD44-234ENST00000531873 TMTC3Q6ZXV5 915 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 BRINP3Q76B58 766 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 B4GALNT4Q76KP1 1039 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 SIRT6Q8N6T7 355 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 CCDC89Q8N998 374 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 KCNG4Q8TDN1 519 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 LENG9Q96B70 501 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 ERP27Q96DN0 273 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 RNFT2Q96EX2 444 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 FBXL20Q96IG2 436 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 C8orf49Q96NF6 230 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 CLSTN3Q9BQT9 956 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 AIFM2Q9BRQ8 373 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 FSD1LQ9BXM9 530 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 HDHD5Q9BXW7 423 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 CTDSP1Q9GZU7 261 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 LMAN2LQ9H0V9 348 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 BRF2Q9HAW0 419 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 THAP1Q9NVV9 213 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 MTMR4Q9NYA4 1195 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 SEMA5BQ9P283 1151 aa3.29□□□□□ -1.88
CD44-234ENST00000531873 MGAT4CQ9UBM8 478 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms