RNA–Protein interactions for RNA: ENST00000515708.5

TSPAN17-209, Transcript of tetraspanin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN17, Length 2,361 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-209ENST00000515708 COPG2Q9UBF2 871 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 NME7Q9Y5B8 376 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 PTPRFP10586 1907 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 SCN1AP35498 2009 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 BRCA1P38398 1863 aaKnown RBP17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 ZNF195O14628 629 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 DGKIO75912 1065 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 PDE5AO76074 875 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 SORBS2O94875 1100 aaKnown RBP17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 PGAM1P18669 254 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 MGAT1P26572 445 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 KYAT1Q16773 422 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 PPM1JQ5JR12 505 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 VWA5B1Q5TIE3 1220 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 PDSS2Q86YH6 399 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 IFNLR1Q8IU57 520 aaPredicted RBP17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 CCDC185Q8N715 623 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 COLGALT1Q8NBJ5 622 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 SLC26A7Q8TE54 656 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 KIF12Q96FN5 646 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 MPHOSPH6Q99547 160 aaKnown RBP17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 CCDC28BQ9BUN5 200 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 SHCBP1LQ9BZQ2 653 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 TRIM4Q9C037 500 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 TMEM216Q9P0N5 145 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 CDH22Q9UJ99 828 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 SNX9Q9Y5X1 595 aa17.29■□□□□ 0.36
TSPAN17-209ENST00000515708 GOT1P17174 413 aa17.28■□□□□ 0.36
TSPAN17-209ENST00000515708 SNX16P57768 344 aa17.28■□□□□ 0.36
TSPAN17-209ENST00000515708 NAB1Q13506 487 aa17.28■□□□□ 0.36
TSPAN17-209ENST00000515708 INSCQ1MX18 579 aa17.28■□□□□ 0.36
TSPAN17-209ENST00000515708 LRRC36Q1X8D7 754 aa17.28■□□□□ 0.36
TSPAN17-209ENST00000515708 PDPK2PQ6A1A2 396 aa17.28■□□□□ 0.36
TSPAN17-209ENST00000515708 MTHFD1LQ6UB35 978 aa17.28■□□□□ 0.36
TSPAN17-209ENST00000515708 ACAD11Q709F0 780 aa17.28■□□□□ 0.36
TSPAN17-209ENST00000515708 RASSF3Q86WH2 238 aa17.28■□□□□ 0.36
TSPAN17-209ENST00000515708 HACE1Q8IYU2 909 aa17.28■□□□□ 0.36
TSPAN17-209ENST00000515708 CCDC124Q96CT7 223 aaKnown RBP17.28■□□□□ 0.36
TSPAN17-209ENST00000515708 USP3Q9Y6I4 520 aa17.28■□□□□ 0.36
TSPAN17-209ENST00000515708 ZSWIM8A7E2V4 1837 aa17.28■□□□□ 0.36
TSPAN17-209ENST00000515708 MCM3APO60318 1980 aa17.28■□□□□ 0.36
TSPAN17-209ENST00000515708 RALBP11234 206 aa17.28■□□□□ 0.36
TSPAN17-209ENST00000515708 RAB27AP51159 221 aa17.28■□□□□ 0.36
TSPAN17-209ENST00000515708 SMAD1Q15797 465 aaKnown RBP17.28■□□□□ 0.36
TSPAN17-209ENST00000515708 SLC26A9Q7LBE3 791 aa17.28■□□□□ 0.36
TSPAN17-209ENST00000515708 JADE3Q92613 823 aa17.28■□□□□ 0.36
TSPAN17-209ENST00000515708 CMTM5Q96DZ9 223 aa17.28■□□□□ 0.36
TSPAN17-209ENST00000515708 CYP4F11Q9HBI6 524 aa17.28■□□□□ 0.36
TSPAN17-209ENST00000515708 EIF2B3Q9NR50 452 aaKnown RBP17.28■□□□□ 0.36
TSPAN17-209ENST00000515708 ERAP1Q9NZ08 941 aa17.28■□□□□ 0.36
TSPAN17-209ENST00000515708 ADAMTS6Q9UKP5 1117 aa17.28■□□□□ 0.36
TSPAN17-209ENST00000515708 HACD1B0YJ81 288 aa17.27■□□□□ 0.36
TSPAN17-209ENST00000515708 INSRRP14616 1297 aa17.27■□□□□ 0.36
TSPAN17-209ENST00000515708 HARS2P49590 506 aaKnown RBP17.27■□□□□ 0.36
TSPAN17-209ENST00000515708 CDK7P50613 346 aa17.27■□□□□ 0.36
TSPAN17-209ENST00000515708 ABCE1P61221 599 aaKnown RBP17.27■□□□□ 0.36
TSPAN17-209ENST00000515708 SOWAHAQ2M3V2 549 aa17.27■□□□□ 0.36
TSPAN17-209ENST00000515708 SFT2D3Q587I9 215 aa17.27■□□□□ 0.36
TSPAN17-209ENST00000515708 BSPRYQ5W0U4 402 aa17.27■□□□□ 0.36
TSPAN17-209ENST00000515708 LPCAT4Q643R3 524 aa17.27■□□□□ 0.36
TSPAN17-209ENST00000515708 NT5DC4Q86YG4 428 aa17.27■□□□□ 0.36
TSPAN17-209ENST00000515708 PYROXD2Q8N2H3 581 aa17.27■□□□□ 0.36
TSPAN17-209ENST00000515708 NLGN2Q8NFZ4 835 aa17.27■□□□□ 0.36
TSPAN17-209ENST00000515708 LPIN3Q9BQK8 851 aa17.27■□□□□ 0.36
TSPAN17-209ENST00000515708 GGA3Q9NZ52 723 aa17.27■□□□□ 0.36
TSPAN17-209ENST00000515708 IL1RAPL1Q9NZN1 696 aa17.27■□□□□ 0.36
TSPAN17-209ENST00000515708 AKT3Q9Y243 479 aa17.27■□□□□ 0.36
TSPAN17-209ENST00000515708 ADCY6O43306 1168 aa17.26■□□□□ 0.35
TSPAN17-209ENST00000515708 VTNP04004 478 aa17.26■□□□□ 0.35
TSPAN17-209ENST00000515708 TXNP10599 105 aaKnown RBP17.26■□□□□ 0.35
TSPAN17-209ENST00000515708 ITGAXP20702 1163 aa17.26■□□□□ 0.35
TSPAN17-209ENST00000515708 TYK2P29597 1187 aa17.26■□□□□ 0.35
TSPAN17-209ENST00000515708 GMPRP36959 345 aa17.26■□□□□ 0.35
TSPAN17-209ENST00000515708 VGLL4Q14135 290 aa17.26■□□□□ 0.35
TSPAN17-209ENST00000515708 PHTF2Q8N3S3 785 aa17.26■□□□□ 0.35
TSPAN17-209ENST00000515708 TRPM4Q8TD43 1214 aa17.26■□□□□ 0.35
TSPAN17-209ENST00000515708 AZIN2Q96A70 460 aa17.26■□□□□ 0.35
TSPAN17-209ENST00000515708 NAT9Q9BTE0 207 aa17.26■□□□□ 0.35
TSPAN17-209ENST00000515708 SYBUQ9NX95 663 aa17.26■□□□□ 0.35
TSPAN17-209ENST00000515708 POMPQ9Y244 141 aa17.26■□□□□ 0.35
TSPAN17-209ENST00000515708 LOC100653049A0A140TA62 436 aa17.26■□□□□ 0.35
TSPAN17-209ENST00000515708 RNF103O00237 685 aa17.26■□□□□ 0.35
TSPAN17-209ENST00000515708 PPEF2O14830 753 aa17.26■□□□□ 0.35
TSPAN17-209ENST00000515708 KRT34O76011 436 aa17.26■□□□□ 0.35
TSPAN17-209ENST00000515708 NCF2P19878 526 aaPredicted RBP17.26■□□□□ 0.35
TSPAN17-209ENST00000515708 DEUP1Q05D60 604 aa17.26■□□□□ 0.35
TSPAN17-209ENST00000515708 ITGA9Q13797 1035 aa17.26■□□□□ 0.35
TSPAN17-209ENST00000515708 CFAP157Q5JU67 520 aa17.26■□□□□ 0.35
TSPAN17-209ENST00000515708 FRMD7Q6ZUT3 714 aa17.26■□□□□ 0.35
TSPAN17-209ENST00000515708 DEFB107AQ8IZN7 70 aa17.26■□□□□ 0.35
TSPAN17-209ENST00000515708 CXCL16Q9H2A7 254 aa17.26■□□□□ 0.35
TSPAN17-209ENST00000515708 VCX3BQ9H321 246 aa17.26■□□□□ 0.35
TSPAN17-209ENST00000515708 ZNF358Q9NW07 568 aa17.26■□□□□ 0.35
TSPAN17-209ENST00000515708 CPSF2Q9P2I0 782 aaKnown RBP17.26■□□□□ 0.35
TSPAN17-209ENST00000515708 TXNDC16Q9P2K2 825 aa17.26■□□□□ 0.35
TSPAN17-209ENST00000515708 MFSD11O43934 449 aa17.25■□□□□ 0.35
TSPAN17-209ENST00000515708 OPHN1O60890 802 aa17.25■□□□□ 0.35
TSPAN17-209ENST00000515708 USP2O75604 605 aaPredicted RBP17.25■□□□□ 0.35
TSPAN17-209ENST00000515708 ERVK-10P10266 1014 aa17.25■□□□□ 0.35
TSPAN17-209ENST00000515708 MX2P20592 715 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms