RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 IL31Q6EBC2 164 aa12.48□□□□□ -0.41
CDK7-208ENST00000512687 FAM183BPQ6ZVS7 135 aa12.48□□□□□ -0.41
CDK7-208ENST00000512687 BEND5Q7L4P6 421 aa12.48□□□□□ -0.41
CDK7-208ENST00000512687 CACUL1Q86Y37 369 aa12.48□□□□□ -0.41
CDK7-208ENST00000512687 UNC45BQ8IWX7 931 aa12.48□□□□□ -0.41
CDK7-208ENST00000512687 WFIKKN2Q8TEU8 576 aa12.48□□□□□ -0.41
CDK7-208ENST00000512687 AZIN2Q96A70 460 aa12.48□□□□□ -0.41
CDK7-208ENST00000512687 PRDM16Q9HAZ2 1276 aa12.48□□□□□ -0.41
CDK7-208ENST00000512687 POPDC2Q9HBU9 364 aa12.48□□□□□ -0.41
CDK7-208ENST00000512687 STIM2Q9P246 746 aa12.48□□□□□ -0.41
CDK7-208ENST00000512687 USP36Q9P275 1121 aaKnown RBP12.48□□□□□ -0.41
CDK7-208ENST00000512687 DACH1Q9UI36 760 aa12.48□□□□□ -0.41
CDK7-208ENST00000512687 PILRBQ9UKJ0 227 aa12.48□□□□□ -0.41
CDK7-208ENST00000512687 CHD5Q8TDI0 1954 aa12.48□□□□□ -0.41
CDK7-208ENST00000512687 FAM170AA1A519 330 aa12.47□□□□□ -0.41
CDK7-208ENST00000512687 C4orf47A7E2U8 309 aa12.47□□□□□ -0.41
CDK7-208ENST00000512687 KHNYNO15037 678 aaKnown RBP12.47□□□□□ -0.41
CDK7-208ENST00000512687 AP5Z1O43299 807 aa12.47□□□□□ -0.41
CDK7-208ENST00000512687 ZNF217O75362 1048 aa12.47□□□□□ -0.41
CDK7-208ENST00000512687 GRAP2O75791 330 aa12.47□□□□□ -0.41
CDK7-208ENST00000512687 TRUB2O95900 331 aaKnown RBP12.47□□□□□ -0.41
CDK7-208ENST00000512687 LMAN2Q12907 356 aa12.47□□□□□ -0.41
CDK7-208ENST00000512687 STARD3Q14849 445 aa12.47□□□□□ -0.41
CDK7-208ENST00000512687 FNDC3BQ53EP0 1204 aaKnown RBP12.47□□□□□ -0.41
CDK7-208ENST00000512687 ZC3H12AQ5D1E8 599 aaKnown RBP12.47□□□□□ -0.41
CDK7-208ENST00000512687 TRIM61Q5EBN2 209 aa12.47□□□□□ -0.41
CDK7-208ENST00000512687 TCP11X2Q5H9J9 407 aa12.47□□□□□ -0.41
CDK7-208ENST00000512687 MS4A13Q5J8X5 152 aa12.47□□□□□ -0.41
CDK7-208ENST00000512687 SPDYCQ5MJ68 293 aa12.47□□□□□ -0.41
CDK7-208ENST00000512687 MPP7Q5T2T1 576 aa12.47□□□□□ -0.41
CDK7-208ENST00000512687 OTUD1Q5VV17 481 aaPredicted RBP12.47□□□□□ -0.41
CDK7-208ENST00000512687 MBLAC2Q68D91 279 aa12.47□□□□□ -0.41
CDK7-208ENST00000512687 SERPINA13PQ6UXR4 307 aa12.47□□□□□ -0.41
CDK7-208ENST00000512687 SLC36A4Q6YBV0 504 aa12.47□□□□□ -0.41
CDK7-208ENST00000512687 MMS22LQ6ZRQ5 1243 aa12.47□□□□□ -0.41
CDK7-208ENST00000512687 RBM43Q6ZSC3 357 aaKnown RBP12.47□□□□□ -0.41
CDK7-208ENST00000512687 SYT12Q8IV01 421 aa12.47□□□□□ -0.41
CDK7-208ENST00000512687 FAM71AQ8IYT1 594 aa12.47□□□□□ -0.41
CDK7-208ENST00000512687 AHI1Q8N157 1196 aa12.47□□□□□ -0.41
CDK7-208ENST00000512687 CFAP52Q8N1V2 620 aa12.47□□□□□ -0.41
CDK7-208ENST00000512687 MYO19Q96H55 970 aa12.47□□□□□ -0.41
CDK7-208ENST00000512687 PPP1R13BQ96KQ4 1090 aa12.47□□□□□ -0.41
CDK7-208ENST00000512687 HSPA12BQ96MM6 686 aa12.47□□□□□ -0.41
CDK7-208ENST00000512687 SLC2A13Q96QE2 648 aa12.47□□□□□ -0.41
CDK7-208ENST00000512687 LSM14BQ9BX40 385 aaKnown RBP12.47□□□□□ -0.41
CDK7-208ENST00000512687 NAA15Q9BXJ9 866 aaKnown RBP12.47□□□□□ -0.41
CDK7-208ENST00000512687 ADAM33Q9BZ11 813 aa12.47□□□□□ -0.41
CDK7-208ENST00000512687 TMEM245Q9H330 911 aa12.47□□□□□ -0.41
CDK7-208ENST00000512687 TAB2Q9NYJ8 693 aa12.47□□□□□ -0.41
CDK7-208ENST00000512687 EVLQ9UI08 416 aaPredicted RBP12.47□□□□□ -0.41
CDK7-208ENST00000512687 INTS6Q9UL03 887 aaKnown RBP12.47□□□□□ -0.41
CDK7-208ENST00000512687 NFE2L3Q9Y4A8 694 aa12.47□□□□□ -0.41
CDK7-208ENST00000512687 CAPN9O14815 690 aa12.46□□□□□ -0.41
CDK7-208ENST00000512687 EPHX1P07099 455 aa12.46□□□□□ -0.41
CDK7-208ENST00000512687 ADRB1P08588 477 aa12.46□□□□□ -0.41
CDK7-208ENST00000512687 KLK7P49862 253 aa12.46□□□□□ -0.41
CDK7-208ENST00000512687 YWHAZP63104 245 aaKnown RBP12.46□□□□□ -0.41
CDK7-208ENST00000512687 PTK2Q05397 1052 aa12.46□□□□□ -0.41
CDK7-208ENST00000512687 ZNF33AQ06730 810 aa12.46□□□□□ -0.41
CDK7-208ENST00000512687 CAMK2GQ13555 558 aaPredicted RBP12.46□□□□□ -0.41
CDK7-208ENST00000512687 RAPGEF1Q13905 1077 aa12.46□□□□□ -0.41
CDK7-208ENST00000512687 DRAP1Q14919 205 aaPredicted RBP12.46□□□□□ -0.41
CDK7-208ENST00000512687 DCAF6Q58WW2 860 aa12.46□□□□□ -0.41
CDK7-208ENST00000512687 FSCBQ5H9T9 825 aa12.46□□□□□ -0.41
CDK7-208ENST00000512687 KLHDC7AQ5VTJ3 777 aa12.46□□□□□ -0.41
CDK7-208ENST00000512687 RAP1GAP2Q684P5 730 aa12.46□□□□□ -0.41
CDK7-208ENST00000512687 OLFML1Q6UWY5 402 aa12.46□□□□□ -0.41
CDK7-208ENST00000512687 C11orf57Q6ZUT1 292 aaPredicted RBP12.46□□□□□ -0.41
CDK7-208ENST00000512687 METTL3Q86U44 580 aaKnown RBP12.46□□□□□ -0.41
CDK7-208ENST00000512687 CIR1Q86X95 450 aaPredicted RBP12.46□□□□□ -0.41
CDK7-208ENST00000512687 TMPRSS6Q8IU80 811 aa12.46□□□□□ -0.41
CDK7-208ENST00000512687 MFN1Q8IWA4 741 aa12.46□□□□□ -0.41
CDK7-208ENST00000512687 LGI2Q8N0V4 545 aa12.46□□□□□ -0.41
CDK7-208ENST00000512687 DEFB106AQ8N104 65 aa12.46□□□□□ -0.41
CDK7-208ENST00000512687 HJURPQ8NCD3 748 aaPredicted RBP12.46□□□□□ -0.41
CDK7-208ENST00000512687 PTCD2Q8WV60 388 aaKnown RBP12.46□□□□□ -0.41
CDK7-208ENST00000512687 IRX2Q9BZI1 471 aaPredicted RBP12.46□□□□□ -0.41
CDK7-208ENST00000512687 LHX5Q9H2C1 402 aa12.46□□□□□ -0.41
CDK7-208ENST00000512687 MTG2Q9H4K7 406 aa12.46□□□□□ -0.41
CDK7-208ENST00000512687 SYNJ2BP-COX16A0A087WUM0 186 aa12.45□□□□□ -0.42
CDK7-208ENST00000512687 PES1O00541 588 aaKnown RBP12.45□□□□□ -0.42
CDK7-208ENST00000512687 ZBTB24O43167 697 aaPredicted RBP12.45□□□□□ -0.42
CDK7-208ENST00000512687 TIMM44O43615 452 aa12.45□□□□□ -0.42
CDK7-208ENST00000512687 SYNCRIPO60506 623 aaKnown RBP12.45□□□□□ -0.42
CDK7-208ENST00000512687 DAB1O75553 588 aa12.45□□□□□ -0.42
CDK7-208ENST00000512687 APOEP02649 317 aa12.45□□□□□ -0.42
CDK7-208ENST00000512687 DLDP09622 509 aaKnown RBP12.45□□□□□ -0.42
CDK7-208ENST00000512687 ENGP17813 658 aa12.45□□□□□ -0.42
CDK7-208ENST00000512687 TFE3P19532 575 aaPredicted RBP12.45□□□□□ -0.42
CDK7-208ENST00000512687 TACR2P21452 398 aa12.45□□□□□ -0.42
CDK7-208ENST00000512687 CD6P30203 668 aa12.45□□□□□ -0.42
CDK7-208ENST00000512687 NUMBP49757 651 aa12.45□□□□□ -0.42
CDK7-208ENST00000512687 TPMTP51580 245 aa12.45□□□□□ -0.42
CDK7-208ENST00000512687 ARID5AQ03989 594 aa12.45□□□□□ -0.42
CDK7-208ENST00000512687 CDKAL1Q5VV42 579 aa12.45□□□□□ -0.42
CDK7-208ENST00000512687 OR6B2Q6IFH4 312 aa12.45□□□□□ -0.42
CDK7-208ENST00000512687 SLC23A3Q6PIS1 610 aa12.45□□□□□ -0.42
CDK7-208ENST00000512687 CHSY1Q86X52 802 aa12.45□□□□□ -0.42
CDK7-208ENST00000512687 CARNMT1Q8N4J0 409 aa12.45□□□□□ -0.42
CDK7-208ENST00000512687 FIBINQ8TAL6 211 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms