RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 PRAMEF18Q5VWM3 479 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 ZNF600Q6ZNG1 722 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 C15orf52Q6ZUT6 534 aaKnown RBP3.9□□□□□ -1.79
SUB1-202ENST00000502453 DYMQ7RTS9 669 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 SPATA24Q86W54 205 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 CNTN4Q8IWV2 1026 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 YAF2Q8IY57 180 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 LZTR1Q8N653 840 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 GBP7Q8N8V2 638 aaPredicted RBP3.9□□□□□ -1.79
SUB1-202ENST00000502453 SUPT20HQ8NEM7 779 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 TRIM58Q8NG06 486 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 SLC13A3Q8WWT9 602 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 PRPF31Q8WWY3 499 aaKnown RBP3.9□□□□□ -1.79
SUB1-202ENST00000502453 C17orf75Q9HAS0 396 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 AP5S1Q9NUS5 200 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 INTS13Q9NVM9 706 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 CWC15Q9P013 229 aaKnown RBP3.9□□□□□ -1.79
SUB1-202ENST00000502453 GULP1Q9UBP9 304 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 PRELID1Q9Y255 219 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 KDRP35968 1356 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 TTC24A2A3L6 582 aaPredicted RBP3.9□□□□□ -1.79
SUB1-202ENST00000502453 FAM90A27PA6NNH2 459 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 ZNF185O15231 689 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 ABHD16AO95870 558 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 PDGFRAP16234 1089 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 ENDOUP21128 410 aaKnown RBP3.9□□□□□ -1.79
SUB1-202ENST00000502453 PTPN3P26045 913 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 PRDX5P30044 214 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 PRKAR2BP31323 418 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 BAG6P46379 1132 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 CDR1P51861 262 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 STAT2P52630 851 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 ARHGAP8P85298 464 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 HADHQ16836 314 aaKnown RBP3.9□□□□□ -1.79
SUB1-202ENST00000502453 LEXMQ3ZCV2 418 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 ANO7Q6IWH7 933 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 KIF6Q6ZMV9 814 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 TMEM200AQ86VY9 491 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 CILP2Q8IUL8 1156 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 FAM185AQ8N0U4 392 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 DLG3Q92796 817 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 RBM15Q96T37 977 aaKnown RBP eCLIP3.9□□□□□ -1.79
SUB1-202ENST00000502453 ASPNQ9BXN1 380 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 TSGA10Q9BZW7 698 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 COQ10BQ9H8M1 238 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 RXFP1Q9HBX9 757 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 TLR8Q9NR97 1041 aaKnown RBP3.9□□□□□ -1.79
SUB1-202ENST00000502453 GIMAP4Q9NUV9 329 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 UCKL1Q9NWZ5 548 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 GDF2Q9UK05 429 aaPredicted RBP3.9□□□□□ -1.79
SUB1-202ENST00000502453 BAG5Q9UL15 447 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 MKLN1Q9UL63 735 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 NENFQ9UMX5 172 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 MROH5Q6ZUA9 1318 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 MYBBP1AQ9BQG0 1328 aaKnown RBP3.89□□□□□ -1.79
SUB1-202ENST00000502453 KANK1Q14678 1352 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 C7orf72A4D263 438 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 TNFSF14O43557 240 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 ALDH1A2O94788 518 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 SLCO2B1O94956 709 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 ALPPP05187 535 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 RB1P06400 928 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 RPSAP08865 295 aaKnown RBP3.89□□□□□ -1.79
SUB1-202ENST00000502453 ALPPL2P10696 532 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 CHRNA3P32297 505 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 IRAK1P51617 712 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 CDH15P55291 814 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 MGAT2Q10469 447 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 GRIK3Q13003 919 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 RAPSNQ13702 412 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 EFTUD2Q15029 972 aaKnown RBP eCLIP3.89□□□□□ -1.79
SUB1-202ENST00000502453 STK11Q15831 433 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 PCSK7Q16549 785 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 MAN2A1Q16706 1144 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 DGKDQ16760 1214 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 MYLK3Q32MK0 819 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 BTBD8Q5XKL5 378 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 GPAT2Q6NUI2 795 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 MFSD7Q6UXD7 560 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 KIAA0408Q6ZU52 694 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 GPRIN1Q7Z2K8 1008 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 CAND1Q86VP6 1230 aaKnown RBP3.89□□□□□ -1.79
SUB1-202ENST00000502453 RHPN2Q8IUC4 686 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 SYT2Q8N9I0 419 aaPredicted RBP3.89□□□□□ -1.79
SUB1-202ENST00000502453 SNIP1Q8TAD8 396 aaKnown RBP3.89□□□□□ -1.79
SUB1-202ENST00000502453 SLC22A17Q8WUG5 538 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 KBTBD7Q8WVZ9 684 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 MAP6Q96JE9 813 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 CDK5RAP1Q96SZ6 601 aaKnown RBP3.89□□□□□ -1.79
SUB1-202ENST00000502453 PRRX2Q99811 253 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 SRSF8Q9BRL6 282 aaKnown RBP3.89□□□□□ -1.79
SUB1-202ENST00000502453 EDEM2Q9BV94 578 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 PHF7Q9BWX1 381 aaPredicted RBP3.89□□□□□ -1.79
SUB1-202ENST00000502453 MS4A7Q9GZW8 240 aaPredicted RBP3.89□□□□□ -1.79
SUB1-202ENST00000502453 TP63Q9H3D4 680 aaPredicted RBP3.89□□□□□ -1.79
SUB1-202ENST00000502453 TMEM8AQ9HCN3 771 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 IL1RAPL2Q9NP60 686 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 PLA2G2EQ9NZK7 142 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 CNIH4Q9P003 139 aa3.89□□□□□ -1.79
SUB1-202ENST00000502453 IDH1O75874 414 aaKnown RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms