RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 TRIM68Q6AZZ1 485 aa20.74■□□□□ 0.91
CTSD-206ENST00000497544 SLFN11Q7Z7L1 901 aa20.74■□□□□ 0.91
CTSD-206ENST00000497544 FLCNQ8NFG4 579 aa20.74■□□□□ 0.91
CTSD-206ENST00000497544 CSGALNACT1Q8TDX6 532 aa20.74■□□□□ 0.91
CTSD-206ENST00000497544 ATP2A3Q93084 1043 aa20.74■□□□□ 0.91
CTSD-206ENST00000497544 COL26A1Q96A83 441 aa20.74■□□□□ 0.91
CTSD-206ENST00000497544 HAPLN3Q96S86 360 aa20.74■□□□□ 0.91
CTSD-206ENST00000497544 SIK2Q9H0K1 926 aa20.74■□□□□ 0.91
CTSD-206ENST00000497544 EBF3Q9H4W6 596 aa20.74■□□□□ 0.91
CTSD-206ENST00000497544 TRIM10Q9UDY6 481 aa20.74■□□□□ 0.91
CTSD-206ENST00000497544 SALL4Q9UJQ4 1053 aa20.74■□□□□ 0.91
CTSD-206ENST00000497544 STOML2Q9UJZ1 356 aa20.74■□□□□ 0.91
CTSD-206ENST00000497544 FAM208BQ5VWN6 2430 aa20.74■□□□□ 0.91
CTSD-206ENST00000497544 A0A0U1RQJ8 604 aa20.73■□□□□ 0.91
CTSD-206ENST00000497544 GOLGA6L7A0A1B0GV03 622 aa20.73■□□□□ 0.91
CTSD-206ENST00000497544 MACROD2A1Z1Q3 448 aa20.73■□□□□ 0.91
CTSD-206ENST00000497544 ZSCAN12O43309 604 aa20.73■□□□□ 0.91
CTSD-206ENST00000497544 PAGE1O75459 146 aa20.73■□□□□ 0.91
CTSD-206ENST00000497544 NFATC1O95644 943 aa20.73■□□□□ 0.91
CTSD-206ENST00000497544 ARSAP15289 507 aa20.73■□□□□ 0.91
CTSD-206ENST00000497544 AOC1P19801 751 aa20.73■□□□□ 0.91
CTSD-206ENST00000497544 AIF1P55008 147 aa20.73■□□□□ 0.91
CTSD-206ENST00000497544 RUNX3Q13761 415 aa20.73■□□□□ 0.91
CTSD-206ENST00000497544 ACBD5Q5T8D3 534 aaPredicted RBP20.73■□□□□ 0.91
CTSD-206ENST00000497544 ZNF662Q6ZS27 426 aa20.73■□□□□ 0.91
CTSD-206ENST00000497544 CPXM2Q8N436 756 aa20.73■□□□□ 0.91
CTSD-206ENST00000497544 ARFGAP1Q8N6T3 406 aa20.73■□□□□ 0.91
CTSD-206ENST00000497544 DTWD2Q8NBA8 298 aa20.73■□□□□ 0.91
CTSD-206ENST00000497544 TPCN2Q8NHX9 752 aa20.73■□□□□ 0.91
CTSD-206ENST00000497544 ATRIPQ8WXE1 791 aa20.73■□□□□ 0.91
CTSD-206ENST00000497544 NTAN1Q96AB6 310 aa20.73■□□□□ 0.91
CTSD-206ENST00000497544 XPO7Q9UIA9 1087 aaKnown RBP20.73■□□□□ 0.91
CTSD-206ENST00000497544 USP18Q9UMW8 372 aa20.73■□□□□ 0.91
CTSD-206ENST00000497544 GUCA1BQ9UMX6 200 aa20.73■□□□□ 0.91
CTSD-206ENST00000497544 NARSO43776 548 aaKnown RBP20.72■□□□□ 0.91
CTSD-206ENST00000497544 BUB1BO60566 1050 aaPredicted RBP20.72■□□□□ 0.91
CTSD-206ENST00000497544 CYBBP04839 570 aa20.72■□□□□ 0.91
CTSD-206ENST00000497544 SRFP11831 508 aa20.72■□□□□ 0.91
CTSD-206ENST00000497544 MAN1A1P33908 653 aa20.72■□□□□ 0.91
CTSD-206ENST00000497544 SLC1A1P43005 524 aa20.72■□□□□ 0.91
CTSD-206ENST00000497544 MLLT6P55198 1093 aaPredicted RBP20.72■□□□□ 0.91
CTSD-206ENST00000497544 PFKPQ01813 784 aa20.72■□□□□ 0.91
CTSD-206ENST00000497544 TNK2Q07912 1038 aa20.72■□□□□ 0.91
CTSD-206ENST00000497544 DHCR24Q15392 516 aa20.72■□□□□ 0.91
CTSD-206ENST00000497544 ERMARDQ5T6L9 678 aa20.72■□□□□ 0.91
CTSD-206ENST00000497544 DAB2IPQ5VWQ8 1189 aa20.72■□□□□ 0.91
CTSD-206ENST00000497544 RAP1GAP2Q684P5 730 aa20.72■□□□□ 0.91
CTSD-206ENST00000497544 NADSYN1Q6IA69 706 aa20.72■□□□□ 0.91
CTSD-206ENST00000497544 TPGS1Q6ZTW0 290 aa20.72■□□□□ 0.91
CTSD-206ENST00000497544 CHSY1Q86X52 802 aa20.72■□□□□ 0.91
CTSD-206ENST00000497544 CPA6Q8N4T0 437 aa20.72■□□□□ 0.91
CTSD-206ENST00000497544 RNF10Q8N5U6 811 aaKnown RBP20.72■□□□□ 0.91
CTSD-206ENST00000497544 CCDC185Q8N715 623 aa20.72■□□□□ 0.91
CTSD-206ENST00000497544 TMA16Q96EY4 203 aaKnown RBP20.72■□□□□ 0.91
CTSD-206ENST00000497544 ECT2Q9H8V3 914 aa20.72■□□□□ 0.91
CTSD-206ENST00000497544 LZTFL1Q9NQ48 299 aa20.72■□□□□ 0.91
CTSD-206ENST00000497544 ANLNQ9NQW6 1124 aa20.72■□□□□ 0.91
CTSD-206ENST00000497544 SPHK2Q9NRA0 654 aa20.72■□□□□ 0.91
CTSD-206ENST00000497544 TMPRSS4Q9NRS4 437 aa20.72■□□□□ 0.91
CTSD-206ENST00000497544 FZD10Q9ULW2 581 aa20.72■□□□□ 0.91
CTSD-206ENST00000497544 F5H5T6 163 aa20.71■□□□□ 0.91
CTSD-206ENST00000497544 TRDMT1O14717 391 aaKnown RBP20.71■□□□□ 0.91
CTSD-206ENST00000497544 TSPAN3O60637 253 aa20.71■□□□□ 0.91
CTSD-206ENST00000497544 MOCS3O95396 460 aa20.71■□□□□ 0.91
CTSD-206ENST00000497544 TACR2P21452 398 aa20.71■□□□□ 0.91
CTSD-206ENST00000497544 ITPRIPL2Q3MIP1 535 aa20.71■□□□□ 0.91
CTSD-206ENST00000497544 BOLA3Q53S33 107 aa20.71■□□□□ 0.91
CTSD-206ENST00000497544 FAM133BQ5BKY9 247 aaKnown RBP20.71■□□□□ 0.91
CTSD-206ENST00000497544 MS4A13Q5J8X5 152 aa20.71■□□□□ 0.91
CTSD-206ENST00000497544 EFHC2Q5JST6 749 aa20.71■□□□□ 0.91
CTSD-206ENST00000497544 LY6G5CQ5SRR4 150 aa20.71■□□□□ 0.91
CTSD-206ENST00000497544 RHBDF2Q6PJF5 856 aa20.71■□□□□ 0.91
CTSD-206ENST00000497544 DAAM2Q86T65 1068 aa20.71■□□□□ 0.91
CTSD-206ENST00000497544 FAM217AQ8IXS0 508 aa20.71■□□□□ 0.91
CTSD-206ENST00000497544 LGI2Q8N0V4 545 aa20.71■□□□□ 0.91
CTSD-206ENST00000497544 C1orf74Q96LT6 269 aa20.71■□□□□ 0.91
CTSD-206ENST00000497544 OSBPL2Q9H1P3 480 aa20.71■□□□□ 0.91
CTSD-206ENST00000497544 ZWILCHQ9H900 591 aa20.71■□□□□ 0.91
CTSD-206ENST00000497544 TRPV5Q9NQA5 729 aa20.71■□□□□ 0.91
CTSD-206ENST00000497544 HPS4Q9NQG7 708 aa20.71■□□□□ 0.91
CTSD-206ENST00000497544 SLC2A4RGQ9NR83 387 aa20.71■□□□□ 0.91
CTSD-206ENST00000497544 GTSE1Q9NYZ3 720 aa20.71■□□□□ 0.91
CTSD-206ENST00000497544 DUSP12Q9UNI6 340 aa20.71■□□□□ 0.91
CTSD-206ENST00000497544 HS3ST4Q9Y661 456 aa20.71■□□□□ 0.91
CTSD-206ENST00000497544 ALG6Q9Y672 507 aa20.71■□□□□ 0.91
CTSD-206ENST00000497544 SPOPO43791 374 aa20.7■□□□□ 0.9
CTSD-206ENST00000497544 ADH1CP00326 375 aa20.7■□□□□ 0.9
CTSD-206ENST00000497544 SLC6A4P31645 630 aa20.7■□□□□ 0.9
CTSD-206ENST00000497544 GAD2Q05329 585 aa20.7■□□□□ 0.9
CTSD-206ENST00000497544 ANO4Q32M45 955 aa20.7■□□□□ 0.9
CTSD-206ENST00000497544 MPPE1Q53F39 396 aa20.7■□□□□ 0.9
CTSD-206ENST00000497544 PIK3R6Q5UE93 754 aa20.7■□□□□ 0.9
CTSD-206ENST00000497544 RFWD3Q6PCD5 774 aa20.7■□□□□ 0.9
CTSD-206ENST00000497544 LRRC31Q6UY01 552 aa20.7■□□□□ 0.9
CTSD-206ENST00000497544 TMEM25Q86YD3 366 aa20.7■□□□□ 0.9
CTSD-206ENST00000497544 TTC8Q8TAM2 541 aa20.7■□□□□ 0.9
CTSD-206ENST00000497544 KIAA1524Q8TCG1 905 aa20.7■□□□□ 0.9
CTSD-206ENST00000497544 DDI1Q8WTU0 396 aa20.7■□□□□ 0.9
CTSD-206ENST00000497544 RUBCNQ92622 972 aa20.7■□□□□ 0.9
CTSD-206ENST00000497544 DNASE1L2Q92874 299 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms