RNA–Protein interactions for RNA: ENST00000495643.1

DCTN1-223, Transcript of dynactin subunit 1, human

TSL 3

Gene DCTN1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN1-223	ENST00000495643	ZNF677	Q86XU0	584 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	XYLT1	Q86Y38	959 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	DHX40	Q8IX18	779 aa	Known RBP	11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	WFIKKN2	Q8TEU8	576 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	SLC20A1	Q8WUM9	679 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	NT5C3B	Q969T7	300 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	C18orf8	Q96DM3	657 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	ERLEC1	Q96DZ1	483 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	SPACA7	Q96KW9	195 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	MRGPRX1	Q96LB2	322 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	NPY6R	Q99463	290 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	FUCA2	Q9BTY2	467 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	ADAM33	Q9BZ11	813 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	CIPC	Q9C0C6	399 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	NAT10	Q9H0A0	1025 aa	Known RBP	11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	SLC6A17	Q9H1V8	727 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	PDCL3	Q9H2J4	239 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	FAM204A	Q9H8W3	233 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	DDIT4	Q9NX09	232 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	CALCOCO1	Q9P1Z2	691 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	STIM2	Q9P246	746 aa		11.35	□□□□□ -0.59
DCTN1-223	ENST00000495643	FOXD2	O60548	495 aa	Predicted RBP	11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	CYP1A1	P04798	512 aa	Predicted RBP	11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	TFE3	P19532	575 aa	Predicted RBP	11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	TACR2	P21452	398 aa		11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	PRKCH	P24723	683 aa		11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	CCR1	P32246	355 aa		11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	MPL	P40238	635 aa		11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	MATK	P42679	507 aa		11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	FMO1	Q01740	532 aa		11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	CDR2	Q01850	454 aa		11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	STARD3	Q14849	445 aa		11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	SF3A2	Q15428	464 aa	Known RBP	11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	PTPRN	Q16849	979 aa		11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	C2CD6	Q53TS8	623 aa		11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	RAP1GAP2	Q684P5	730 aa		11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	MBLAC2	Q68D91	279 aa		11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	METTL3	Q86U44	580 aa	Known RBP	11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	MFN1	Q8IWA4	741 aa		11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	LGI2	Q8N0V4	545 aa		11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	AHI1	Q8N157	1196 aa		11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	CFAP52	Q8N1V2	620 aa		11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	ATP6V0D2	Q8N8Y2	350 aa		11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	ZNF557	Q8N988	423 aa	Predicted RBP	11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	NEK11	Q8NG66	645 aa		11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	CPA5	Q8WXQ8	436 aa		11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	TTC17	Q96AE7	1141 aa		11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	MKRN2	Q9H000	416 aa	Known RBP	11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	TMEM245	Q9H330	911 aa		11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	SMOC1	Q9H4F8	434 aa		11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	INTS6	Q9UL03	887 aa	Known RBP	11.34	□□□□□ -0.59
DCTN1-223	ENST00000495643	SYNJ2BP-COX16	A0A087WUM0	186 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	IGHV1OR15-9	A0A0B4J2B8	117 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	FAM170A	A1A519	330 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	TYW5	A2RUC4	315 aa	Known RBP	11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643		M0QYT0	321 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	ZBTB24	O43167	697 aa	Predicted RBP	11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	MAP3K13	O43283	966 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	GDF9	O60383	454 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	ZNF217	O75362	1048 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	LUC7L3	O95232	432 aa	Known RBP	11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	CAVIN2	O95810	425 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	DLD	P09622	509 aa	Known RBP	11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	C7	P10643	843 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	ABCB4	P21439	1286 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	SDHB	P21912	280 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	STAT1	P42224	750 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	CXCR3	P49682	368 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	COPA	P53621	1224 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	RNASE9	P60153	205 aa	Known RBP	11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	CREB5	Q02930	508 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	LMAN2	Q12907	356 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	CAMK2G	Q13555	558 aa	Predicted RBP	11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	PUM1	Q14671	1186 aa	Known RBP eCLIP	11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	KLHL40	Q2TBA0	621 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	FSCB	Q5H9T9	825 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	SPDYC	Q5MJ68	293 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	NAA35	Q5VZE5	725 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	SERPINA13P	Q6UXR4	307 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	LPCAT2	Q7L5N7	544 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	ARC	Q7LC44	396 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	CHSY1	Q86X52	802 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	TMEFF1	Q8IYR6	380 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	CARNMT1	Q8N4J0	409 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	CYB5D2	Q8WUJ1	264 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	PGAP3	Q96FM1	320 aa	Predicted RBP	11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	SPAG5	Q96R06	1193 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	PRDM16	Q9HAZ2	1276 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	CD93	Q9NPY3	652 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	RTN4	Q9NQC3	1192 aa	Known RBP	11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	VPS45	Q9NRW7	570 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	RXFP3	Q9NSD7	469 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	RRN3	Q9NYV6	651 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	COX16	Q9P0S2	106 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	SLC12A6	Q9UHW9	1150 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	TMEM59L	Q9UK28	342 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	PLA2G4C	Q9UP65	541 aa		11.33	□□□□□ -0.6
DCTN1-223	ENST00000495643	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms