RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	GRM6	O15303	877 aa		11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	ATMIN	O43313	823 aa	Predicted RBP	11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	RB1	P06400	928 aa		11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	GALT	P07902	379 aa		11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	MASP1	P48740	699 aa		11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	ETV1	P50549	477 aa		11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	RPP38	P78345	283 aa	Known RBP	11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	KDSR	Q06136	332 aa		11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	DSC1	Q08554	894 aa		11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	GOLGA8F	Q08AF8	430 aa		11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	GOLGA8DP	Q0D2H9	430 aa		11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	DCTN2	Q13561	401 aa	Known RBP	11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	ADGRE1	Q14246	886 aa		11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	ALF	Q53S48	1182 aa		11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919		Q6ZNX1	250 aa		11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	GATAD2A	Q86YP4	633 aa		11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	CBWD2	Q8IUF1	395 aa		11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	PASD1	Q8IV76	773 aa		11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	COLGALT2	Q8IYK4	626 aa		11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	RDH13	Q8NBN7	331 aa		11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	CALML6	Q8TD86	181 aa		11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	P2RX5	Q93086	422 aa		11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	C18orf25	Q96B23	403 aa	Predicted RBP	11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	CCDC138	Q96M89	665 aa		11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	PPP1R10	Q96QC0	940 aa	Known RBP	11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	GAL3ST1	Q99999	423 aa		11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	HEPH	Q9BQS7	1158 aa		11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	CENPK	Q9BS16	269 aa		11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	TMEM175	Q9BSA9	504 aa		11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	VPS11	Q9H270	941 aa		11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	FANCE	Q9HB96	536 aa		11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	DLGAP2	Q9P1A6	1054 aa		11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	ASIC3	Q9UHC3	531 aa		11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	DMGDH	Q9UI17	866 aa	Known RBP	11.95	□□□□□ -0.5
BRCA1-222	ENST00000493919	ANK1	P16157	1881 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	TTC26	A0AVF1	554 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	ZBTB14	O43829	449 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	EXOC3	O60645	756 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	LPXN	O60711	386 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	NPPA	P01160	153 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	ENO2	P09104	434 aa	Predicted RBP	11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	VAMP1	P23763	118 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	HSPA9	P38646	679 aa	Known RBP	11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	PRCP	P42785	496 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	C21orf58	P58505	322 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	SOX4	Q06945	474 aa	Predicted RBP	11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	CYTH1	Q15438	398 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	NAB2	Q15742	525 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	JADE1	Q6IE81	842 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	ALKAL1	Q6UXT8	129 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	TMC7	Q7Z402	723 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	ITIH5	Q86UX2	942 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	JAZF1	Q86VZ6	243 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	SLC39A11	Q8N1S5	342 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	NATD1	Q8N6N6	113 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	CCDC63	Q8NA47	563 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	XXYLT1	Q8NBI6	393 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	PJA1	Q8NG27	643 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	POF1B	Q8WVV4	589 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	ATP6V1E2	Q96A05	226 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	TNIP3	Q96KP6	325 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	AP1M1	Q9BXS5	423 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	SLC38A7	Q9NVC3	462 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	UNC80	Q8N2C7	3258 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919		B8ZZF3	427 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	PI4K2B	G5E9Z4	385 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	PDXK	O00764	312 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	KIAA0391	O15091	583 aa	Known RBP	11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	ST8SIA5	O15466	376 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	CALU	O43852	315 aa	Predicted RBP	11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	POP4	O95707	220 aa	Known RBP	11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	NR3C1	P04150	777 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	NFIC	P08651	508 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	KCNE1	P15382	129 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	CLCNKB	P51801	687 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	NUBP1	P53384	320 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	SNRPF	P62306	86 aa	Known RBP	11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	KRT17	Q04695	432 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	TMEM132D	Q14C87	1099 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	SNRNP35	Q16560	246 aa	Known RBP	11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	ODF2	Q5BJF6	829 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	XKR4	Q5GH76	650 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	BTBD8	Q5XKL5	378 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	FAM171B	Q6P995	826 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	RANBP10	Q6VN20	620 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	NLRP14	Q86W24	1093 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	NKAIN4	Q8IVV8	208 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	TMEM130	Q8N3G9	435 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	LZTR1	Q8N653	840 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	OR52K2	Q8NGK3	314 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	IGSF21	Q96ID5	467 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	CDH19	Q9H159	772 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	ENTPD7	Q9NQZ7	604 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	MARCH5	Q9NX47	278 aa		11.94	□□□□□ -0.5
BRCA1-222	ENST00000493919	ZNF233	A6NK53	670 aa		11.93	□□□□□ -0.5
BRCA1-222	ENST00000493919	ADRB2	P07550	413 aa		11.93	□□□□□ -0.5
BRCA1-222	ENST00000493919	MYBL1	P10243	752 aa		11.93	□□□□□ -0.5
BRCA1-222	ENST00000493919	VCL	P18206	1134 aa		11.93	□□□□□ -0.5
BRCA1-222	ENST00000493919	NR2F2	P24468	414 aa		11.93	□□□□□ -0.5
BRCA1-222	ENST00000493919	PHB	P35232	272 aa		11.93	□□□□□ -0.5

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