RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 GBE1Q04446 702 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 KCNC3Q14003 757 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 ARTNQ5T4W7 220 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 RWDD4Q6NW29 188 aaKnown RBP21.55■■□□□ 1.04
SND1-214ENST00000489417 TMCO3Q6UWJ1 677 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 MAB21L3Q8N8X9 362 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 VN1R2Q8NFZ6 395 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 ZFRQ96KR1 1074 aaKnown RBP21.55■■□□□ 1.04
SND1-214ENST00000489417 TRIM51Q9BSJ1 452 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 DZANK1Q9NVP4 752 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 SMPD4Q9NXE4 827 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 ZNF148Q9UQR1 794 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 FGF10O15520 208 aaPredicted RBP21.54■■□□□ 1.04
SND1-214ENST00000489417 MFSD11O43934 449 aa21.54■■□□□ 1.04
SND1-214ENST00000489417 MOSPD3O75425 235 aa21.54■■□□□ 1.04
SND1-214ENST00000489417 ITGAVP06756 1048 aa21.54■■□□□ 1.04
SND1-214ENST00000489417 TUBBP07437 444 aa21.54■■□□□ 1.04
SND1-214ENST00000489417 IRF1P10914 325 aa21.54■■□□□ 1.04
SND1-214ENST00000489417 DDX6P26196 483 aaKnown RBP eCLIP21.54■■□□□ 1.04
SND1-214ENST00000489417 SLC11A2P49281 568 aa21.54■■□□□ 1.04
SND1-214ENST00000489417 SLC7A9P82251 487 aa21.54■■□□□ 1.04
SND1-214ENST00000489417 GUCY2DQ02846 1103 aa21.54■■□□□ 1.04
SND1-214ENST00000489417 AUHQ13825 339 aaKnown RBP21.54■■□□□ 1.04
SND1-214ENST00000489417 ARHGAP15Q53QZ3 475 aa21.54■■□□□ 1.04
SND1-214ENST00000489417 RAP1GAP2Q684P5 730 aa21.54■■□□□ 1.04
SND1-214ENST00000489417 SYDE1Q6ZW31 735 aaPredicted RBP21.54■■□□□ 1.04
SND1-214ENST00000489417 CHSY1Q86X52 802 aa21.54■■□□□ 1.04
SND1-214ENST00000489417 ZNF683Q8IZ20 524 aa21.54■■□□□ 1.04
SND1-214ENST00000489417 AZIN2Q96A70 460 aa21.54■■□□□ 1.04
SND1-214ENST00000489417 TCEAL4Q96EI5 215 aa21.54■■□□□ 1.04
SND1-214ENST00000489417 PRMT1Q99873 361 aaKnown RBP21.54■■□□□ 1.04
SND1-214ENST00000489417 RAB17Q9H0T7 212 aa21.54■■□□□ 1.04
SND1-214ENST00000489417 ZNF576Q9H609 170 aa21.54■■□□□ 1.04
SND1-214ENST00000489417 NSUN3Q9H649 340 aaKnown RBP21.54■■□□□ 1.04
SND1-214ENST00000489417 CATSPERBQ9H7T0 1116 aa21.54■■□□□ 1.04
SND1-214ENST00000489417 SFXN1Q9H9B4 322 aa21.54■■□□□ 1.04
SND1-214ENST00000489417 CPQQ9Y646 472 aa21.54■■□□□ 1.04
SND1-214ENST00000489417 LAMA2P24043 3122 aaKnown RBP21.53■■□□□ 1.04
SND1-214ENST00000489417 CHD7Q9P2D1 2997 aa21.53■■□□□ 1.04
SND1-214ENST00000489417 H7C0C1 242 aa21.53■■□□□ 1.04
SND1-214ENST00000489417 DYNC1I1O14576 645 aa21.53■■□□□ 1.04
SND1-214ENST00000489417 PAPLNO95428 1278 aa21.53■■□□□ 1.04
SND1-214ENST00000489417 GAS8O95995 478 aa21.53■■□□□ 1.04
SND1-214ENST00000489417 CKMP06732 381 aa21.53■■□□□ 1.04
SND1-214ENST00000489417 RBP3P10745 1247 aa21.53■■□□□ 1.04
SND1-214ENST00000489417 TACR2P21452 398 aa21.53■■□□□ 1.04
SND1-214ENST00000489417 CORO1AP31146 461 aaKnown RBP21.53■■□□□ 1.04
SND1-214ENST00000489417 ATP5OP48047 213 aa21.53■■□□□ 1.04
SND1-214ENST00000489417 NTHL1P78549 312 aa21.53■■□□□ 1.04
SND1-214ENST00000489417 SLC10A2Q12908 348 aaPredicted RBP21.53■■□□□ 1.04
SND1-214ENST00000489417 STXBP5Q5T5C0 1151 aa21.53■■□□□ 1.04
SND1-214ENST00000489417 GPR158Q5T848 1215 aa21.53■■□□□ 1.04
SND1-214ENST00000489417 NADSYN1Q6IA69 706 aa21.53■■□□□ 1.04
SND1-214ENST00000489417 LRRC31Q6UY01 552 aa21.53■■□□□ 1.04
SND1-214ENST00000489417 BZW1Q7L1Q6 419 aaKnown RBP21.53■■□□□ 1.04
SND1-214ENST00000489417 GRASPQ7Z6J2 395 aaPredicted RBP21.53■■□□□ 1.04
SND1-214ENST00000489417 ZC3H18Q86VM9 953 aaKnown RBP21.53■■□□□ 1.04
SND1-214ENST00000489417 C12orf76Q8N812 135 aaPredicted RBP21.53■■□□□ 1.04
SND1-214ENST00000489417 SMG7Q92540 1137 aaKnown RBP21.53■■□□□ 1.04
SND1-214ENST00000489417 HINFPQ9BQA5 517 aa21.53■■□□□ 1.04
SND1-214ENST00000489417 IGFLR1Q9H665 355 aa21.53■■□□□ 1.04
SND1-214ENST00000489417 PIDD1Q9HB75 910 aa21.53■■□□□ 1.04
SND1-214ENST00000489417 DTLQ9NZJ0 730 aa21.53■■□□□ 1.04
SND1-214ENST00000489417 RAB21Q9UL25 225 aa21.53■■□□□ 1.04
SND1-214ENST00000489417 VANGL2Q9ULK5 521 aa21.53■■□□□ 1.04
SND1-214ENST00000489417 UTP11Q9Y3A2 253 aaKnown RBP21.53■■□□□ 1.04
SND1-214ENST00000489417 ZSCAN5CA6NGD5 496 aaPredicted RBP21.52■■□□□ 1.04
SND1-214ENST00000489417 BHMG1C9JSJ3 638 aaPredicted RBP21.52■■□□□ 1.04
SND1-214ENST00000489417 KLKB1P03952 638 aa21.52■■□□□ 1.04
SND1-214ENST00000489417 MCM3P25205 808 aa21.52■■□□□ 1.04
SND1-214ENST00000489417 XRCC4Q13426 336 aa21.52■■□□□ 1.04
SND1-214ENST00000489417 PPP1R7Q15435 360 aa21.52■■□□□ 1.04
SND1-214ENST00000489417 TEAD2Q15562 447 aa21.52■■□□□ 1.04
SND1-214ENST00000489417 SLC5A9Q2M3M2 681 aa21.52■■□□□ 1.04
SND1-214ENST00000489417 PRSS36Q5K4E3 855 aa21.52■■□□□ 1.04
SND1-214ENST00000489417 WDR93Q6P2C0 686 aa21.52■■□□□ 1.04
SND1-214ENST00000489417 GSTA5Q7RTV2 222 aa21.52■■□□□ 1.04
SND1-214ENST00000489417 DENND1CQ8IV53 801 aa21.52■■□□□ 1.04
SND1-214ENST00000489417 ALLCQ8N6M5 410 aa21.52■■□□□ 1.04
SND1-214ENST00000489417 WBP2Q969T9 261 aa21.52■■□□□ 1.04
SND1-214ENST00000489417 SLC46A2Q9BY10 475 aa21.52■■□□□ 1.04
SND1-214ENST00000489417 EPB41L5Q9HCM4 733 aa21.52■■□□□ 1.04
SND1-214ENST00000489417 PPARGC1AQ9UBK2 798 aaKnown RBP21.52■■□□□ 1.04
SND1-214ENST00000489417 RAD54BQ9Y620 910 aa21.52■■□□□ 1.04
SND1-214ENST00000489417 DENND4CQ5VZ89 1909 aa21.51■■□□□ 1.03
SND1-214ENST00000489417 IGLV3-10A0A075B6K4 115 aa21.51■■□□□ 1.03
SND1-214ENST00000489417 GOLGA6L7A0A1B0GV03 622 aa21.51■■□□□ 1.03
SND1-214ENST00000489417 SOBPA7XYQ1 873 aa21.51■■□□□ 1.03
SND1-214ENST00000489417 ZNF197O14709 1029 aa21.51■■□□□ 1.03
SND1-214ENST00000489417 MAP3K6O95382 1288 aa21.51■■□□□ 1.03
SND1-214ENST00000489417 LATS1O95835 1130 aa21.51■■□□□ 1.03
SND1-214ENST00000489417 SERPINB6P35237 376 aa21.51■■□□□ 1.03
SND1-214ENST00000489417 VSNL1P62760 191 aa21.51■■□□□ 1.03
SND1-214ENST00000489417 PTK6Q13882 451 aa21.51■■□□□ 1.03
SND1-214ENST00000489417 KCTD19Q17RG1 926 aaPredicted RBP21.51■■□□□ 1.03
SND1-214ENST00000489417 TCEAL5Q5H9L2 206 aa21.51■■□□□ 1.03
SND1-214ENST00000489417 FBXL22Q6P050 247 aa21.51■■□□□ 1.03
SND1-214ENST00000489417 DARS2Q6PI48 645 aaKnown RBP21.51■■□□□ 1.03
SND1-214ENST00000489417 CDKL3Q8IVW4 592 aaPredicted RBP21.51■■□□□ 1.03
SND1-214ENST00000489417 IFT20Q8IY31 132 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms