RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 SLC44A5Q8NCS7 719 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 KLHDC4Q8TBB5 520 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 RHPN1Q8TCX5 695 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 HASPINQ8TF76 798 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 THAP4Q8WY91 577 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 C19orf60Q96EN9 201 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 PDLIM5Q96HC4 596 aaKnown RBP5.74□□□□□ -1.49
SF1-217ENST00000486960 FAM111AQ96PZ2 611 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 MTMR9Q96QG7 549 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 BCL7BQ9BQE9 202 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 OSBPL10Q9BXB5 764 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 TEX12Q9BXU0 123 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 CARD9Q9H257 536 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 SMARCAD1Q9H4L7 1026 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 STN1Q9H668 368 aaKnown RBP5.74□□□□□ -1.49
SF1-217ENST00000486960 OPA3Q9H6K4 179 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 DNAJC18Q9H819 358 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 TMEM165Q9HC07 324 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 GPR108Q9NPR9 543 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 NRIP3Q9NQ35 241 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 SNX15Q9NRS6 342 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 TM7SF3Q9NS93 570 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 SIRT3Q9NTG7 399 aaPredicted RBP5.74□□□□□ -1.49
SF1-217ENST00000486960 BABAM1Q9NWV8 329 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 H2AFY2Q9P0M6 372 aaPredicted RBP5.74□□□□□ -1.49
SF1-217ENST00000486960 KANSL3Q9P2N6 904 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 APEX2Q9UBZ4 518 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 TBX21Q9UL17 535 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 SUFUQ9UMX1 484 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 SMG5Q9UPR3 1016 aaKnown RBP5.74□□□□□ -1.49
SF1-217ENST00000486960 PCDHA8Q9Y5H6 950 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 PSAT1Q9Y617 370 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 CDK5RAP2Q96SN8 1893 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 ZNF236Q9UL36 1845 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 MYO3BQ8WXR4 1341 aa5.74□□□□□ -1.49
SF1-217ENST00000486960 ASXL3Q9C0F0 2248 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 AQP12BA6NM10 295 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 E7EVH7 732 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 NDUFS8O00217 210 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 VWA5AO00534 786 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 TGM5O43548 720 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 XYLBO75191 536 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 GCNT3O95395 438 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 POP4O95707 220 aaKnown RBP5.73□□□□□ -1.49
SF1-217ENST00000486960 FTCDO95954 541 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 TIMP1P01033 207 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 TP53P04637 393 aaPredicted RBP5.73□□□□□ -1.49
SF1-217ENST00000486960 RB1P06400 928 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 TPOP07202 933 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 GHRP10912 638 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 NME2P22392 152 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 SP100P23497 879 aaPredicted RBP5.73□□□□□ -1.49
SF1-217ENST00000486960 TARSP26639 723 aaKnown RBP5.73□□□□□ -1.49
SF1-217ENST00000486960 ABCD3P28288 659 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 CST5P28325 142 aaPredicted RBP5.73□□□□□ -1.49
SF1-217ENST00000486960 CSTF2P33240 577 aaKnown RBP eCLIP5.73□□□□□ -1.49
SF1-217ENST00000486960 ADRA1BP35368 520 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 GRM5P41594 1212 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 GRIA4P48058 902 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 ARCN1P48444 511 aaKnown RBP5.73□□□□□ -1.49
SF1-217ENST00000486960 SLC16A1P53985 500 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 NNTQ13423 1086 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 DHX34Q14147 1143 aaKnown RBP5.73□□□□□ -1.49
SF1-217ENST00000486960 TMEM177Q53S58 311 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 CCDC157Q569K6 752 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 ZBTB41Q5SVQ8 909 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 RBM20Q5T481 1227 aaKnown RBP5.73□□□□□ -1.49
SF1-217ENST00000486960 GARNL3Q5VVW2 1013 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 MFSD5Q6N075 450 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 CAVIN1Q6NZI2 390 aaKnown RBP5.73□□□□□ -1.49
SF1-217ENST00000486960 C8orf74Q6P047 294 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 PAPD4Q6PIY7 484 aaKnown RBP5.73□□□□□ -1.49
SF1-217ENST00000486960 ZNF574Q6ZN55 896 aaPredicted RBP5.73□□□□□ -1.49
SF1-217ENST00000486960 DENND5BQ6ZUT9 1274 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 G2E3Q7L622 706 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 PXKQ7Z7A4 578 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 TRIM59Q8IWR1 403 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 EFCAB13Q8IY85 973 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 MRPL43Q8N983 215 aaKnown RBP5.73□□□□□ -1.49
SF1-217ENST00000486960 ZNF511Q8NB15 262 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 FANCBQ8NB91 859 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 LILRB4Q8NHJ6 448 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 SETD6Q8TBK2 473 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 KCNG4Q8TDN1 519 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 GAL3ST3Q96A11 431 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 PGAP3Q96FM1 320 aaPredicted RBP5.73□□□□□ -1.49
SF1-217ENST00000486960 FGD4Q96M96 766 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 CCDC140Q96MF4 163 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 TTC25Q96NG3 672 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 SIKE1Q9BRV8 207 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 KIFC3Q9BVG8 833 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 APOL6Q9BWW8 343 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 UPF3BQ9BZI7 483 aaKnown RBP5.73□□□□□ -1.49
SF1-217ENST00000486960 AP5M1Q9H0R1 490 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 NRDE2Q9H7Z3 1164 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 CBX8Q9HC52 389 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 IL1RAPL2Q9NP60 686 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 UCKL1Q9NWZ5 548 aa5.73□□□□□ -1.49
SF1-217ENST00000486960 DDX43Q9NXZ2 648 aaKnown RBP5.73□□□□□ -1.49
SF1-217ENST00000486960 SELENONQ9NZV5 590 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms