RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 FCHO2Q0JRZ9 810 aa18.16■□□□□ 0.5
CHMP3-207ENST00000485465 ODF2Q5BJF6 829 aa18.16■□□□□ 0.5
CHMP3-207ENST00000485465 PPP6R3Q5H9R7 873 aaPredicted RBP18.16■□□□□ 0.5
CHMP3-207ENST00000485465 ARTNQ5T4W7 220 aa18.16■□□□□ 0.5
CHMP3-207ENST00000485465 MANEALQ5VSG8 457 aa18.16■□□□□ 0.5
CHMP3-207ENST00000485465 FBXL22Q6P050 247 aa18.16■□□□□ 0.5
CHMP3-207ENST00000485465 RFWD3Q6PCD5 774 aa18.16■□□□□ 0.5
CHMP3-207ENST00000485465 LRRC31Q6UY01 552 aa18.16■□□□□ 0.5
CHMP3-207ENST00000485465 MAP7D3Q8IWC1 876 aa18.16■□□□□ 0.5
CHMP3-207ENST00000485465 YAF2Q8IY57 180 aa18.16■□□□□ 0.5
CHMP3-207ENST00000485465 LGI2Q8N0V4 545 aa18.16■□□□□ 0.5
CHMP3-207ENST00000485465 EXD1Q8NHP7 514 aa18.16■□□□□ 0.5
CHMP3-207ENST00000485465 DEPDC1BQ8WUY9 529 aa18.16■□□□□ 0.5
CHMP3-207ENST00000485465 TSC1Q92574 1164 aa18.16■□□□□ 0.5
CHMP3-207ENST00000485465 RNF25Q96BH1 459 aaPredicted RBP18.16■□□□□ 0.5
CHMP3-207ENST00000485465 EPAS1Q99814 870 aa18.16■□□□□ 0.5
CHMP3-207ENST00000485465 LIMD1Q9UGP4 676 aa18.16■□□□□ 0.5
CHMP3-207ENST00000485465 DNAI1Q9UI46 699 aa18.16■□□□□ 0.5
CHMP3-207ENST00000485465 VANGL2Q9ULK5 521 aa18.16■□□□□ 0.5
CHMP3-207ENST00000485465 CTAGE9A4FU28 777 aa18.15■□□□□ 0.5
CHMP3-207ENST00000485465 C3orf70A6NLC5 250 aaPredicted RBP18.15■□□□□ 0.5
CHMP3-207ENST00000485465 ESPNB1AK53 854 aa18.15■□□□□ 0.5
CHMP3-207ENST00000485465 LOC730098B7Z3J9 87 aa18.15■□□□□ 0.5
CHMP3-207ENST00000485465 TRDMT1O14717 391 aaKnown RBP18.15■□□□□ 0.5
CHMP3-207ENST00000485465 CREB3O43889 395 aa18.15■□□□□ 0.5
CHMP3-207ENST00000485465 TSPAN3O60637 253 aa18.15■□□□□ 0.5
CHMP3-207ENST00000485465 SRGAP2O75044 1071 aa18.15■□□□□ 0.5
CHMP3-207ENST00000485465 LRIG2O94898 1065 aa18.15■□□□□ 0.5
CHMP3-207ENST00000485465 TUBB4AP04350 444 aa18.15■□□□□ 0.5
CHMP3-207ENST00000485465 IFNAR2P48551 515 aa18.15■□□□□ 0.5
CHMP3-207ENST00000485465 VCPP55072 806 aaKnown RBP18.15■□□□□ 0.5
CHMP3-207ENST00000485465 DPYSL3Q14195 570 aa18.15■□□□□ 0.5
CHMP3-207ENST00000485465 GRM2Q14416 872 aa18.15■□□□□ 0.5
CHMP3-207ENST00000485465 SYT10Q6XYQ8 523 aa18.15■□□□□ 0.5
CHMP3-207ENST00000485465 ADGRG2Q8IZP9 1017 aa18.15■□□□□ 0.5
CHMP3-207ENST00000485465 NXPE3Q969Y0 559 aa18.15■□□□□ 0.5
CHMP3-207ENST00000485465 MYEOVQ96EZ4 313 aa18.15■□□□□ 0.5
CHMP3-207ENST00000485465 ASIC4Q96FT7 647 aa18.15■□□□□ 0.5
CHMP3-207ENST00000485465 RBM41Q96IZ5 413 aaKnown RBP18.15■□□□□ 0.5
CHMP3-207ENST00000485465 NAPGQ99747 312 aaPredicted RBP18.15■□□□□ 0.5
CHMP3-207ENST00000485465 CWC15Q9P013 229 aaKnown RBP18.15■□□□□ 0.5
CHMP3-207ENST00000485465 IGLV3-10A0A075B6K4 115 aa18.14■□□□□ 0.49
CHMP3-207ENST00000485465 DRGXA6NNA5 263 aa18.14■□□□□ 0.49
CHMP3-207ENST00000485465 H3BRJ5 948 aa18.14■□□□□ 0.49
CHMP3-207ENST00000485465 KIF2AO00139 706 aaPredicted RBP18.14■□□□□ 0.49
CHMP3-207ENST00000485465 EEF2KO00418 725 aaKnown RBP18.14■□□□□ 0.49
CHMP3-207ENST00000485465 FANCGO15287 622 aa18.14■□□□□ 0.49
CHMP3-207ENST00000485465 PYGMP11217 842 aa18.14■□□□□ 0.49
CHMP3-207ENST00000485465 GOT1P17174 413 aa18.14■□□□□ 0.49
CHMP3-207ENST00000485465 IL4RP24394 825 aa18.14■□□□□ 0.49
CHMP3-207ENST00000485465 CASQ1P31415 396 aa18.14■□□□□ 0.49
CHMP3-207ENST00000485465 HTR7P34969 479 aa18.14■□□□□ 0.49
CHMP3-207ENST00000485465 ARL4AP40617 200 aa18.14■□□□□ 0.49
CHMP3-207ENST00000485465 HCAR3P49019 387 aa18.14■□□□□ 0.49
CHMP3-207ENST00000485465 PDGFRLQ15198 375 aa18.14■□□□□ 0.49
CHMP3-207ENST00000485465 EML3Q32P44 896 aa18.14■□□□□ 0.49
CHMP3-207ENST00000485465 C5orf22Q49AR2 442 aa18.14■□□□□ 0.49
CHMP3-207ENST00000485465 DCAF12L1Q5VU92 463 aa18.14■□□□□ 0.49
CHMP3-207ENST00000485465 MFSD7Q6UXD7 560 aa18.14■□□□□ 0.49
CHMP3-207ENST00000485465 VSIG1Q86XK7 387 aa18.14■□□□□ 0.49
CHMP3-207ENST00000485465 RSAD2Q8WXG1 361 aa18.14■□□□□ 0.49
CHMP3-207ENST00000485465 IGSF8Q969P0 613 aa18.14■□□□□ 0.49
CHMP3-207ENST00000485465 TBC1D31Q96DN5 1066 aa18.14■□□□□ 0.49
CHMP3-207ENST00000485465 TMA16Q96EY4 203 aaKnown RBP18.14■□□□□ 0.49
CHMP3-207ENST00000485465 ZFYVE19Q96K21 471 aa18.14■□□□□ 0.49
CHMP3-207ENST00000485465 PRICKLE1Q96MT3 831 aaPredicted RBP18.14■□□□□ 0.49
CHMP3-207ENST00000485465 RPRD1AQ96P16 312 aaPredicted RBP18.14■□□□□ 0.49
CHMP3-207ENST00000485465 FAM83CQ9BQN1 747 aa18.14■□□□□ 0.49
CHMP3-207ENST00000485465 ZNF670Q9BS34 389 aa18.14■□□□□ 0.49
CHMP3-207ENST00000485465 TRMT61BQ9BVS5 477 aaKnown RBP18.14■□□□□ 0.49
CHMP3-207ENST00000485465 CALN1Q9BXU9 219 aa18.14■□□□□ 0.49
CHMP3-207ENST00000485465 KCNK12Q9HB15 430 aa18.14■□□□□ 0.49
CHMP3-207ENST00000485465 RCOR3Q9P2K3 495 aaPredicted RBP18.14■□□□□ 0.49
CHMP3-207ENST00000485465 PPARGC1AQ9UBK2 798 aaKnown RBP18.14■□□□□ 0.49
CHMP3-207ENST00000485465 PRKAG3Q9UGI9 489 aa18.14■□□□□ 0.49
CHMP3-207ENST00000485465 ZNF487B1APH4 448 aa18.13■□□□□ 0.49
CHMP3-207ENST00000485465 KCNK3O14649 394 aa18.13■□□□□ 0.49
CHMP3-207ENST00000485465 CHADO15335 359 aa18.13■□□□□ 0.49
CHMP3-207ENST00000485465 ZNF500O60304 480 aaPredicted RBP18.13■□□□□ 0.49
CHMP3-207ENST00000485465 HOXC13P31276 330 aa18.13■□□□□ 0.49
CHMP3-207ENST00000485465 CDKN2BP42772 138 aa18.13■□□□□ 0.49
CHMP3-207ENST00000485465 SGSHP51688 502 aa18.13■□□□□ 0.49
CHMP3-207ENST00000485465 TPI1P60174 286 aa18.13■□□□□ 0.49
CHMP3-207ENST00000485465 COPS2P61201 443 aa18.13■□□□□ 0.49
CHMP3-207ENST00000485465 MMRN1Q13201 1228 aa18.13■□□□□ 0.49
CHMP3-207ENST00000485465 ZNF211Q13398 564 aaPredicted RBP18.13■□□□□ 0.49
CHMP3-207ENST00000485465 TAZQ16635 292 aa18.13■□□□□ 0.49
CHMP3-207ENST00000485465 MPPE1Q53F39 396 aa18.13■□□□□ 0.49
CHMP3-207ENST00000485465 RABGAP1LQ5R372 815 aa18.13■□□□□ 0.49
CHMP3-207ENST00000485465 TRIM68Q6AZZ1 485 aa18.13■□□□□ 0.49
CHMP3-207ENST00000485465 RWDD4Q6NW29 188 aaKnown RBP18.13■□□□□ 0.49
CHMP3-207ENST00000485465 SPOCD1Q6ZMY3 1216 aa18.13■□□□□ 0.49
CHMP3-207ENST00000485465 TPGS1Q6ZTW0 290 aa18.13■□□□□ 0.49
CHMP3-207ENST00000485465 RFX8Q6ZV50 586 aa18.13■□□□□ 0.49
CHMP3-207ENST00000485465 ANKS1BQ7Z6G8 1248 aa18.13■□□□□ 0.49
CHMP3-207ENST00000485465 CCDC50Q8IVM0 306 aa18.13■□□□□ 0.49
CHMP3-207ENST00000485465 ADHFE1Q8IWW8 467 aa18.13■□□□□ 0.49
CHMP3-207ENST00000485465 CFAP52Q8N1V2 620 aa18.13■□□□□ 0.49
CHMP3-207ENST00000485465 ATXN2LQ8WWM7 1075 aaKnown RBP18.13■□□□□ 0.49
CHMP3-207ENST00000485465 IRF7Q92985 503 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms