RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 SH2D3CQ8N5H7 860 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 PDZD8Q8NEN9 1154 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 NDRG1Q92597 394 aaKnown RBP8.18□□□□□ -1.1
VMA21-203ENST00000477649 ARHGEF2Q92974 986 aaKnown RBP8.18□□□□□ -1.1
VMA21-203ENST00000477649 WNT2BQ93097 391 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 FATE1Q969F0 183 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 C9orf72Q96LT7 481 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 TSGA13Q96PP4 275 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 CYTH2Q99418 400 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 ADAM33Q9BZ11 813 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 TKTL2Q9H0I9 626 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 RAB6CQ9H0N0 254 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 CCDC134Q9H6E4 229 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 VPS37BQ9H9H4 285 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 LRRC4CQ9HCJ2 640 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 SSU72Q9NP77 194 aaKnown RBP8.18□□□□□ -1.1
VMA21-203ENST00000477649 TLR8Q9NR97 1041 aaKnown RBP8.18□□□□□ -1.1
VMA21-203ENST00000477649 ABI2Q9NYB9 513 aaPredicted RBP8.18□□□□□ -1.1
VMA21-203ENST00000477649 PSMC3IPQ9P2W1 217 aaPredicted RBP8.18□□□□□ -1.1
VMA21-203ENST00000477649 OR12D3Q9UGF7 316 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 GGA2Q9UJY4 613 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 TBX21Q9UL17 535 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 SMG5Q9UPR3 1016 aaKnown RBP8.18□□□□□ -1.1
VMA21-203ENST00000477649 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.17□□□□□ -1.1
VMA21-203ENST00000477649 TBKBP1A7MCY6 615 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 MFSD11O43934 449 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 FAM155BO75949 473 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 TMEM63AO94886 807 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 EFEMP2O95967 443 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 APOEP02649 317 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 AMHP03971 560 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 APRTP07741 180 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 HAPLN1P10915 354 aaPredicted RBP8.17□□□□□ -1.1
VMA21-203ENST00000477649 IBSPP21815 317 aaPredicted RBP8.17□□□□□ -1.1
VMA21-203ENST00000477649 CCNCP24863 283 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 EPHB2P29323 1055 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 HPDP32754 393 aaPredicted RBP8.17□□□□□ -1.1
VMA21-203ENST00000477649 MAGEA3P43357 314 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 PPP3CCP48454 512 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 TLE2Q04725 743 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 IFRD2Q12894 506 aaPredicted RBP8.17□□□□□ -1.1
VMA21-203ENST00000477649 SLC10A2Q12908 348 aaPredicted RBP8.17□□□□□ -1.1
VMA21-203ENST00000477649 NAB1Q13506 487 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 PRPSAP1Q14558 356 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 ZSCAN26Q16670 478 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 ANKRD20A2Q5SQ80 823 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 ANKRD20A1Q5TYW2 823 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 ANKRD20A3Q5VUR7 823 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 TPGS2Q68CL5 300 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 ZNF787Q6DD87 383 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 SLC8B1Q6J4K2 584 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 FBXO46Q6PJ61 603 aaPredicted RBP8.17□□□□□ -1.1
VMA21-203ENST00000477649 C3orf62Q6ZUJ4 267 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 MICALCLQ6ZW33 695 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 ATP6V0D2Q8N8Y2 350 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 EPS8L3Q8TE67 593 aaKnown RBP8.17□□□□□ -1.1
VMA21-203ENST00000477649 ARMC5Q96C12 935 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 TBC1D31Q96DN5 1066 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 P2RY11Q96G91 374 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 SGSM3Q96HU1 749 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 TMEM209Q96SK2 561 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 TTLL2Q9BWV7 592 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 PRDM12Q9H4Q4 367 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 ETNK1Q9HBU6 452 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 INTS9Q9NV88 658 aaKnown RBP8.17□□□□□ -1.1
VMA21-203ENST00000477649 TMEM30AQ9NV96 361 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 HAUS2Q9NVX0 235 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 MARCH5Q9NX47 278 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 WBP1LQ9NX94 342 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 EURLQ9NYK6 297 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 NKIRAS1Q9NYS0 192 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 CALCOCO1Q9P1Z2 691 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 PPARGC1AQ9UBK2 798 aaKnown RBP8.17□□□□□ -1.1
VMA21-203ENST00000477649 MTRRQ9UBK8 725 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 DNAJB4Q9UDY4 337 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 ZNF180Q9UJW8 692 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 SSX2IPQ9Y2D8 614 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 TEX264Q9Y6I9 313 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 IKBKGQ9Y6K9 419 aa8.17□□□□□ -1.1
VMA21-203ENST00000477649 TNRC18O15417 2968 aaPredicted RBP8.16□□□□□ -1.1
VMA21-203ENST00000477649 SYNJ2BP-COX16A0A087WUM0 186 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 IQANK1A0A1B0GTG1 560 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 MAGEB16A2A368 324 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 MTMR11A4FU01 709 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 GMNCA6NCL1 334 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 KCNU1A8MYU2 1149 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 RNF103O00237 685 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 PRPF4O43172 522 aaKnown RBP eCLIP8.16□□□□□ -1.1
VMA21-203ENST00000477649 B4GALT3O60512 393 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 BAIAP3O94812 1187 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 LRIG2O94898 1065 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 SUN1O94901 812 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 FAM107AO95990 144 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 CLTBP09497 229 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 CPB1P15086 417 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 LAG3P18627 525 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 CNTFP26441 200 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 GBP2P32456 591 aaPredicted RBP8.16□□□□□ -1.1
VMA21-203ENST00000477649 PPM1AP35813 382 aa8.16□□□□□ -1.1
VMA21-203ENST00000477649 GARSP41250 739 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms