RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 NUP205Q92621 2012 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 GON4LQ3T8J9 2241 aa16.25■□□□□ 0.19
CPSF3-203ENST00000475482 CTAGE9A4FU28 777 aa16.25■□□□□ 0.19
CPSF3-203ENST00000475482 YJEFN3A6XGL0 299 aa16.25■□□□□ 0.19
CPSF3-203ENST00000475482 E7ENQ6 273 aa16.25■□□□□ 0.19
CPSF3-203ENST00000475482 SGK1O00141 431 aa16.25■□□□□ 0.19
CPSF3-203ENST00000475482 PENKP01210 267 aaPredicted RBP16.25■□□□□ 0.19
CPSF3-203ENST00000475482 ABCB4P21439 1286 aa16.25■□□□□ 0.19
CPSF3-203ENST00000475482 BRD2P25440 801 aaKnown RBP16.25■□□□□ 0.19
CPSF3-203ENST00000475482 NOP2P46087 812 aaKnown RBP16.25■□□□□ 0.19
CPSF3-203ENST00000475482 DAOAP59103 153 aa16.25■□□□□ 0.19
CPSF3-203ENST00000475482 KDSRQ06136 332 aa16.25■□□□□ 0.19
CPSF3-203ENST00000475482 SPEM2Q0P670 501 aa16.25■□□□□ 0.19
CPSF3-203ENST00000475482 TRIP4Q15650 581 aaPredicted RBP16.25■□□□□ 0.19
CPSF3-203ENST00000475482 BSPRYQ5W0U4 402 aa16.25■□□□□ 0.19
CPSF3-203ENST00000475482 CEP68Q76N32 757 aa16.25■□□□□ 0.19
CPSF3-203ENST00000475482 KBTBD6Q86V97 674 aa16.25■□□□□ 0.19
CPSF3-203ENST00000475482 SYCE1Q8N0S2 351 aa16.25■□□□□ 0.19
CPSF3-203ENST00000475482 CPXM2Q8N436 756 aa16.25■□□□□ 0.19
CPSF3-203ENST00000475482 TXNDC5Q8NBS9 432 aaKnown RBP16.25■□□□□ 0.19
CPSF3-203ENST00000475482 TSTD1Q8NFU3 115 aa16.25■□□□□ 0.19
CPSF3-203ENST00000475482 BBS2Q9BXC9 721 aa16.25■□□□□ 0.19
CPSF3-203ENST00000475482 PACSIN1Q9BY11 444 aa16.25■□□□□ 0.19
CPSF3-203ENST00000475482 OLA1Q9NTK5 396 aaKnown RBP16.25■□□□□ 0.19
CPSF3-203ENST00000475482 RASAL2Q9UJF2 1139 aa16.25■□□□□ 0.19
CPSF3-203ENST00000475482 THADAQ6YHU6 1953 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 TBC1D3BA6NDS4 549 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 PRR5-ARHGAP8B1AHC4 643 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 NEDD8-MDP1E9PL57 170 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 GFRA2O00451 464 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 KLF8O95600 359 aaPredicted RBP16.24■□□□□ 0.19
CPSF3-203ENST00000475482 CALB1P05937 261 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 CDH5P33151 784 aaPredicted RBP16.24■□□□□ 0.19
CPSF3-203ENST00000475482 TIE1P35590 1138 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 CHKAP35790 457 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 GPD2P43304 727 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 NOMO3P69849 1222 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 ARHGAP8P85298 464 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 LMNB2Q03252 620 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 C1QBPQ07021 282 aaKnown RBP16.24■□□□□ 0.19
CPSF3-203ENST00000475482 TUBB2AQ13885 445 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 TCEAL1Q15170 157 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 CSRP2Q16527 193 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 PLK5Q496M5 336 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 EOGTQ5NDL2 527 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 FYB2Q5VWT5 728 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 NAA35Q5VZE5 725 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 GRAMD4Q6IC98 578 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 TPGS1Q6ZTW0 290 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 ERMP1Q7Z2K6 904 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 PHF13Q86YI8 300 aaPredicted RBP16.24■□□□□ 0.19
CPSF3-203ENST00000475482 MDGA1Q8NFP4 955 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 IRGQQ8WZA9 623 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 PLD4Q96BZ4 506 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 XPO6Q96QU8 1125 aaKnown RBP16.24■□□□□ 0.19
CPSF3-203ENST00000475482 TUBB2BQ9BVA1 445 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 CD248Q9HCU0 757 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 SEMA4GQ9NTN9 838 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 UVRAGQ9P2Y5 699 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 TRIM10Q9UDY6 481 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 STOML2Q9UJZ1 356 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 AGO1Q9UL18 857 aaKnown RBP16.24■□□□□ 0.19
CPSF3-203ENST00000475482 STRIP2Q9ULQ0 834 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 SLC27A6Q9Y2P4 619 aa16.24■□□□□ 0.19
CPSF3-203ENST00000475482 HBS1LQ9Y450 684 aaKnown RBP16.24■□□□□ 0.19
CPSF3-203ENST00000475482 A0A0U1RQJ8 604 aa16.23■□□□□ 0.19
CPSF3-203ENST00000475482 PRRT4C9JH25 899 aa16.23■□□□□ 0.19
CPSF3-203ENST00000475482 EPN2O95208 641 aa16.23■□□□□ 0.19
CPSF3-203ENST00000475482 CALCAP01258 141 aa16.23■□□□□ 0.19
CPSF3-203ENST00000475482 CORO1AP31146 461 aaKnown RBP16.23■□□□□ 0.19
CPSF3-203ENST00000475482 HADHBP55084 474 aaKnown RBP16.23■□□□□ 0.19
CPSF3-203ENST00000475482 PUM1Q14671 1186 aaKnown RBP eCLIP16.23■□□□□ 0.19
CPSF3-203ENST00000475482 MSANTD2Q6P1R3 559 aa16.23■□□□□ 0.19
CPSF3-203ENST00000475482 NUDT18Q6ZVK8 323 aa16.23■□□□□ 0.19
CPSF3-203ENST00000475482 SIX6OS1Q8N1H7 587 aa16.23■□□□□ 0.19
CPSF3-203ENST00000475482 SLC35F6Q8N357 371 aa16.23■□□□□ 0.19
CPSF3-203ENST00000475482 ZNF653Q96CK0 615 aa16.23■□□□□ 0.19
CPSF3-203ENST00000475482 NAPGQ99747 312 aaPredicted RBP16.23■□□□□ 0.19
CPSF3-203ENST00000475482 THAP2Q9H0W7 228 aa16.23■□□□□ 0.19
CPSF3-203ENST00000475482 DUSP15Q9H1R2 295 aaPredicted RBP16.23■□□□□ 0.19
CPSF3-203ENST00000475482 MRPL47Q9HD33 250 aaKnown RBP16.23■□□□□ 0.19
CPSF3-203ENST00000475482 ABCC13Q9NSE7 274 aa16.23■□□□□ 0.19
CPSF3-203ENST00000475482 DNAJC17Q9NVM6 304 aaKnown RBP16.23■□□□□ 0.19
CPSF3-203ENST00000475482 TAS2R14Q9NYV8 317 aa16.23■□□□□ 0.19
CPSF3-203ENST00000475482 ADAM22Q9P0K1 906 aa16.23■□□□□ 0.19
CPSF3-203ENST00000475482 LCMT1Q9UIC8 334 aa16.23■□□□□ 0.19
CPSF3-203ENST00000475482 TFR2Q9UP52 801 aa16.23■□□□□ 0.19
CPSF3-203ENST00000475482 JRKLQ9Y4A0 524 aa16.23■□□□□ 0.19
CPSF3-203ENST00000475482 PCDHGA5Q9Y5G8 931 aa16.23■□□□□ 0.19
CPSF3-203ENST00000475482 SCINQ9Y6U3 715 aa16.23■□□□□ 0.19
CPSF3-203ENST00000475482 DUSP10Q9Y6W6 482 aa16.23■□□□□ 0.19
CPSF3-203ENST00000475482 SPTBN2O15020 2390 aa16.23■□□□□ 0.19
CPSF3-203ENST00000475482 CNOT1A5YKK6 2376 aaKnown RBP16.22■□□□□ 0.19
CPSF3-203ENST00000475482 SLC12A8A0AV02 714 aa16.22■□□□□ 0.19
CPSF3-203ENST00000475482 M0QYV0 167 aa16.22■□□□□ 0.19
CPSF3-203ENST00000475482 MOCS3O95396 460 aa16.22■□□□□ 0.19
CPSF3-203ENST00000475482 CYP1A2P05177 515 aa16.22■□□□□ 0.19
CPSF3-203ENST00000475482 FOXK2Q01167 660 aa16.22■□□□□ 0.19
CPSF3-203ENST00000475482 PLA2G2CQ5R387 149 aa16.22■□□□□ 0.19
CPSF3-203ENST00000475482 ANO7Q6IWH7 933 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms