RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 KLF1Q13351 362 aaPredicted RBP14.83□□□□□ -0.04
COL6A1-202ENST00000463060 AUHQ13825 339 aaKnown RBP14.83□□□□□ -0.04
COL6A1-202ENST00000463060 TUBB2AQ13885 445 aa14.83□□□□□ -0.04
COL6A1-202ENST00000463060 DPYSQ14117 519 aa14.83□□□□□ -0.04
COL6A1-202ENST00000463060 ANKRD20A8PQ5CZ79 823 aa14.83□□□□□ -0.04
COL6A1-202ENST00000463060 ADGRF1Q5T601 910 aa14.83□□□□□ -0.04
COL6A1-202ENST00000463060 FBXL22Q6P050 247 aa14.83□□□□□ -0.04
COL6A1-202ENST00000463060 GET4Q7L5D6 327 aaPredicted RBP14.83□□□□□ -0.04
COL6A1-202ENST00000463060 CELF5Q8N6W0 485 aaKnown RBP14.83□□□□□ -0.04
COL6A1-202ENST00000463060 PQLC3Q8N755 202 aa14.83□□□□□ -0.04
COL6A1-202ENST00000463060 MS4A14Q96JA4 679 aa14.83□□□□□ -0.04
COL6A1-202ENST00000463060 TUBB2BQ9BVA1 445 aa14.83□□□□□ -0.04
COL6A1-202ENST00000463060 OSBPL8Q9BZF1 889 aa14.83□□□□□ -0.04
COL6A1-202ENST00000463060 SIK2Q9H0K1 926 aa14.83□□□□□ -0.04
COL6A1-202ENST00000463060 KIF9Q9HAQ2 790 aa14.83□□□□□ -0.04
COL6A1-202ENST00000463060 OBP2AQ9NY56 170 aa14.83□□□□□ -0.04
COL6A1-202ENST00000463060 PPARGC1AQ9UBK2 798 aaKnown RBP14.83□□□□□ -0.04
COL6A1-202ENST00000463060 RNF14Q9UBS8 474 aa14.83□□□□□ -0.04
COL6A1-202ENST00000463060 ZNF510Q9Y2H8 683 aa14.83□□□□□ -0.04
COL6A1-202ENST00000463060 TCRBV7S2A1N4TA0A589 114 aa14.82□□□□□ -0.04
COL6A1-202ENST00000463060 E9PAM4 449 aa14.82□□□□□ -0.04
COL6A1-202ENST00000463060 PDE2AO00408 941 aaPredicted RBP14.82□□□□□ -0.04
COL6A1-202ENST00000463060 CEP104O60308 925 aa14.82□□□□□ -0.04
COL6A1-202ENST00000463060 URI1O94763 535 aaPredicted RBP14.82□□□□□ -0.04
COL6A1-202ENST00000463060 KRT10P13645 584 aa14.82□□□□□ -0.04
COL6A1-202ENST00000463060 TACR2P21452 398 aa14.82□□□□□ -0.04
COL6A1-202ENST00000463060 KCNA5P22460 613 aa14.82□□□□□ -0.04
COL6A1-202ENST00000463060 GGCXP38435 758 aa14.82□□□□□ -0.04
COL6A1-202ENST00000463060 VIPR2P41587 438 aa14.82□□□□□ -0.04
COL6A1-202ENST00000463060 SMAD4Q13485 552 aaKnown RBP14.82□□□□□ -0.04
COL6A1-202ENST00000463060 KRT81Q14533 505 aa14.82□□□□□ -0.04
COL6A1-202ENST00000463060 SIX1Q15475 284 aaPredicted RBP14.82□□□□□ -0.04
COL6A1-202ENST00000463060 PPP6R3Q5H9R7 873 aaPredicted RBP14.82□□□□□ -0.04
COL6A1-202ENST00000463060 RAP1GAP2Q684P5 730 aa14.82□□□□□ -0.04
COL6A1-202ENST00000463060 RNF43Q68DV7 783 aa14.82□□□□□ -0.04
COL6A1-202ENST00000463060 RFX8Q6ZV50 586 aa14.82□□□□□ -0.04
COL6A1-202ENST00000463060 SLC13A5Q86YT5 568 aaPredicted RBP14.82□□□□□ -0.04
COL6A1-202ENST00000463060 HLA-CQ95604 372 aa14.82□□□□□ -0.04
COL6A1-202ENST00000463060 IGSF8Q969P0 613 aa14.82□□□□□ -0.04
COL6A1-202ENST00000463060 P2RY11Q96G91 374 aa14.82□□□□□ -0.04
COL6A1-202ENST00000463060 PRDM16Q9HAZ2 1276 aa14.82□□□□□ -0.04
COL6A1-202ENST00000463060 EPS15L1Q9UBC2 864 aa14.82□□□□□ -0.04
COL6A1-202ENST00000463060 ZNF212Q9UDV6 495 aa14.82□□□□□ -0.04
COL6A1-202ENST00000463060 MRFAP1Q9Y605 127 aa14.82□□□□□ -0.04
COL6A1-202ENST00000463060 WASH4PA8MWX3 477 aa14.81□□□□□ -0.04
COL6A1-202ENST00000463060 H3BRJ5 948 aa14.81□□□□□ -0.04
COL6A1-202ENST00000463060 DCLK1O15075 740 aa14.81□□□□□ -0.04
COL6A1-202ENST00000463060 CREB3O43889 395 aa14.81□□□□□ -0.04
COL6A1-202ENST00000463060 AMPD1P23109 780 aa14.81□□□□□ -0.04
COL6A1-202ENST00000463060 ARL4AP40617 200 aa14.81□□□□□ -0.04
COL6A1-202ENST00000463060 IRAK1P51617 712 aa14.81□□□□□ -0.04
COL6A1-202ENST00000463060 LEXMQ3ZCV2 418 aa14.81□□□□□ -0.04
COL6A1-202ENST00000463060 SLC9A4Q6AI14 798 aa14.81□□□□□ -0.04
COL6A1-202ENST00000463060 TANGO2Q6ICL3 276 aa14.81□□□□□ -0.04
COL6A1-202ENST00000463060 BBS12Q6ZW61 710 aa14.81□□□□□ -0.04
COL6A1-202ENST00000463060 ZNF572Q7Z3I7 529 aaPredicted RBP14.81□□□□□ -0.04
COL6A1-202ENST00000463060 NLRP14Q86W24 1093 aa14.81□□□□□ -0.04
COL6A1-202ENST00000463060 BBS7Q8IWZ6 715 aa14.81□□□□□ -0.04
COL6A1-202ENST00000463060 CPXM2Q8N436 756 aa14.81□□□□□ -0.04
COL6A1-202ENST00000463060 EPAS1Q99814 870 aa14.81□□□□□ -0.04
COL6A1-202ENST00000463060 DDX50Q9BQ39 737 aaKnown RBP14.81□□□□□ -0.04
COL6A1-202ENST00000463060 CALN1Q9BXU9 219 aa14.81□□□□□ -0.04
COL6A1-202ENST00000463060 LINC00597Q9H2U6 94 aa14.81□□□□□ -0.04
COL6A1-202ENST00000463060 L2HGDHQ9H9P8 463 aa14.81□□□□□ -0.04
COL6A1-202ENST00000463060 ARHGEF4Q9NR80 690 aa14.81□□□□□ -0.04
COL6A1-202ENST00000463060 ETNK2Q9NVF9 386 aa14.81□□□□□ -0.04
COL6A1-202ENST00000463060 SMARCAL1Q9NZC9 954 aa14.81□□□□□ -0.04
COL6A1-202ENST00000463060 LSM7Q9UK45 103 aaKnown RBP14.81□□□□□ -0.04
COL6A1-202ENST00000463060 SH3BP1Q9Y3L3 701 aa14.81□□□□□ -0.04
COL6A1-202ENST00000463060 NR2E1Q9Y466 385 aa14.81□□□□□ -0.04
COL6A1-202ENST00000463060 DOCK4Q8N1I0 1966 aa14.81□□□□□ -0.04
COL6A1-202ENST00000463060 EYSQ5T1H1 3165 aa14.81□□□□□ -0.04
COL6A1-202ENST00000463060 C5orf42Q9H799 3197 aa14.8□□□□□ -0.04
COL6A1-202ENST00000463060 EEF2KO00418 725 aaKnown RBP14.8□□□□□ -0.04
COL6A1-202ENST00000463060 FGGP02679 453 aa14.8□□□□□ -0.04
COL6A1-202ENST00000463060 ERCC2P18074 760 aa14.8□□□□□ -0.04
COL6A1-202ENST00000463060 CETN2P41208 172 aa14.8□□□□□ -0.04
COL6A1-202ENST00000463060 LLGL1Q15334 1064 aa14.8□□□□□ -0.04
COL6A1-202ENST00000463060 ZFYVE27Q5T4F4 411 aa14.8□□□□□ -0.04
COL6A1-202ENST00000463060 SEL1L2Q5TEA6 688 aa14.8□□□□□ -0.04
COL6A1-202ENST00000463060 RFWD3Q6PCD5 774 aa14.8□□□□□ -0.04
COL6A1-202ENST00000463060 CCDC50Q8IVM0 306 aa14.8□□□□□ -0.04
COL6A1-202ENST00000463060 ADGRG2Q8IZP9 1017 aa14.8□□□□□ -0.04
COL6A1-202ENST00000463060 PLD5Q8N7P1 536 aa14.8□□□□□ -0.04
COL6A1-202ENST00000463060 PPM1EQ8WY54 764 aa14.8□□□□□ -0.04
COL6A1-202ENST00000463060 E2F7Q96AV8 911 aa14.8□□□□□ -0.04
COL6A1-202ENST00000463060 OTUB2Q96DC9 234 aa14.8□□□□□ -0.04
COL6A1-202ENST00000463060 TBC1D31Q96DN5 1066 aa14.8□□□□□ -0.04
COL6A1-202ENST00000463060 PRICKLE1Q96MT3 831 aaPredicted RBP14.8□□□□□ -0.04
COL6A1-202ENST00000463060 HEMGNQ9BXL5 484 aa14.8□□□□□ -0.04
COL6A1-202ENST00000463060 KLC2Q9H0B6 622 aa14.8□□□□□ -0.04
COL6A1-202ENST00000463060 RETREG1Q9H6L5 497 aa14.8□□□□□ -0.04
COL6A1-202ENST00000463060 TBC1D14Q9P2M4 693 aa14.8□□□□□ -0.04
COL6A1-202ENST00000463060 VANGL2Q9ULK5 521 aa14.8□□□□□ -0.04
COL6A1-202ENST00000463060 KIF26AQ9ULI4 1882 aaPredicted RBP14.8□□□□□ -0.04
COL6A1-202ENST00000463060 XIRP2A4UGR9 3374 aa14.79□□□□□ -0.04
COL6A1-202ENST00000463060 A0A0C4DFX4 3053 aa14.79□□□□□ -0.04
COL6A1-202ENST00000463060 HEPACAM2A8MVW5 462 aa14.79□□□□□ -0.04
COL6A1-202ENST00000463060 ANHXE9PGG2 379 aa14.79□□□□□ -0.04
COL6A1-202ENST00000463060 PGRMC1O00264 195 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms