RNA–Protein interactions for RNA: ENST00000462400.1

TNRC6A-204, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 2,550 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-204ENST00000462400 LRCH4O75427 683 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 BEST1O76090 585 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 ITGB1P05556 798 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 MYL2P10916 166 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 ARL4CP56559 192 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 GEMIN4P57678 1058 aaKnown RBP12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 KRT72Q14CN4 511 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 ALYREFQ86V81 257 aaKnown RBP12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 LCA5Q86VQ0 697 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 HACE1Q8IYU2 909 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 MCRS1Q96EZ8 462 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 OXNAD1Q96HP4 312 aaPredicted RBP12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 OLFM3Q96PB7 478 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 NMUR2Q9GZQ4 415 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 EBF3Q9H4W6 596 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 ETNK2Q9NVF9 386 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 DNPEPQ9ULA0 475 aa12.37□□□□□ -0.43
TNRC6A-204ENST00000462400 PSTPIP1O43586 416 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 ENO1P06733 434 aaKnown RBP12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 DLDP09622 509 aaKnown RBP12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 GABRB2P47870 512 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 RAP1GDS1P52306 607 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 AP2B1P63010 937 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 RASA2Q15283 850 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 MRPL10Q7Z7H8 261 aaKnown RBP12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 UNC93AQ86WB7 457 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 SCUBE1Q8IWY4 988 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 B3GALNT2Q8NCR0 500 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 SLC35F5Q8WV83 523 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 HIC2Q96JB3 615 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 PANX3Q96QZ0 392 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 RHOBTB2Q9BYZ6 727 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 PHACTR1Q9C0D0 580 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 ARHGEF4Q9NR80 690 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 DNAAF2Q9NVR5 837 aaKnown RBP12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 GIT1Q9Y2X7 761 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 TET1Q8NFU7 2136 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 KBTBD13C9JR72 458 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 F8W8V4 182 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 ARVCFO00192 962 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 PAPSS1O43252 624 aaPredicted RBP12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 CIB2O75838 187 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 B3GAT3O94766 335 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 CD48P09326 243 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 TFE3P19532 575 aaPredicted RBP12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 CRABP2P29373 138 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 SSTR1P30872 391 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 INHBCP55103 352 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 LRRC36Q1X8D7 754 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 TIGD5Q53EQ6 642 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 FAM26DQ5JW98 314 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 C6orf163Q5TEZ5 329 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 CENPUQ71F23 418 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 CTU1Q7Z7A3 348 aaKnown RBP12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 TTC39CQ8N584 583 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 SLC25A41Q8N5S1 370 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 NAT14Q8WUY8 206 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 RXFP2Q8WXD0 754 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 PPP2R3CQ969Q6 453 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 CCDC28BQ9BUN5 200 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 VPS11Q9H270 941 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 SSU72Q9NP77 194 aaKnown RBP12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 IL1RAPL1Q9NZN1 696 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 KIAA1257Q9ULG3 409 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 PPM1HQ9ULR3 514 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 TMCO1Q9UM00 188 aa12.36□□□□□ -0.43
TNRC6A-204ENST00000462400 TM9SF1O15321 606 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 GNRH1P01148 92 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 PENKP01210 267 aaPredicted RBP12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 VASPP50552 380 aaPredicted RBP12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 GPX6P59796 221 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 USP46P62068 366 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 DYNLT1P63172 113 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 PIGHQ14442 188 aaPredicted RBP12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 UPP1Q16831 310 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 EFHC2Q5JST6 749 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 RAPH1Q70E73 1250 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 NET1Q7Z628 596 aaPredicted RBP12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 SPATA24Q86W54 205 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 TMPRSS6Q8IU80 811 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 KATNAL2Q8IYT4 538 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 RBM15BQ8NDT2 890 aaKnown RBP12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 HSPH1Q92598 858 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 TTC17Q96AE7 1141 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 THTPAQ9BU02 230 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 SLC38A7Q9NVC3 462 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 FAM237BA0A1B0GVD1 139 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 MYBPHLA2RUH7 354 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 ALOX15BO15296 676 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 HNRNPRO43390 633 aaKnown RBP12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 MAGEC1O60732 1142 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 PQBP1O60828 265 aaKnown RBP12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 PDGFRAP16234 1089 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 BGNP21810 368 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 MIPP30301 263 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 ATXN1P54253 815 aaKnown RBP12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 SLC25A11Q02978 314 aaKnown RBP12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 KDSRQ06136 332 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 C1orf146Q5VVC0 180 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms