RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 TMEM65Q6PI78 240 aa6.58□□□□□ -1.36
USP54-206ENST00000433394 SERPINA13PQ6UXR4 307 aa6.58□□□□□ -1.36
USP54-206ENST00000433394 SLC39A5Q6ZMH5 540 aa6.58□□□□□ -1.36
USP54-206ENST00000433394 C1orf122Q6ZSJ8 110 aa6.58□□□□□ -1.36
USP54-206ENST00000433394 SH3RF3Q8TEJ3 882 aaPredicted RBP6.58□□□□□ -1.36
USP54-206ENST00000433394 TBC1D22AQ8WUA7 517 aa6.58□□□□□ -1.36
USP54-206ENST00000433394 FYTTD1Q96QD9 318 aaKnown RBP6.58□□□□□ -1.36
USP54-206ENST00000433394 MLST8Q9BVC4 326 aa6.58□□□□□ -1.36
USP54-206ENST00000433394 ELOVL1Q9BW60 279 aa6.58□□□□□ -1.36
USP54-206ENST00000433394 CIPCQ9C0C6 399 aa6.58□□□□□ -1.36
USP54-206ENST00000433394 AASSQ9UDR5 926 aa6.58□□□□□ -1.36
USP54-206ENST00000433394 COPG1Q9Y678 874 aaKnown RBP6.58□□□□□ -1.36
USP54-206ENST00000433394 CYP3A7-CYP3A51PA0A087WV96 503 aa6.57□□□□□ -1.36
USP54-206ENST00000433394 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.57□□□□□ -1.36
USP54-206ENST00000433394 LINC00473A8K010 186 aa6.57□□□□□ -1.36
USP54-206ENST00000433394 GRM8O00222 908 aa6.57□□□□□ -1.36
USP54-206ENST00000433394 EXOC3O60645 756 aa6.57□□□□□ -1.36
USP54-206ENST00000433394 GCATO75600 419 aa6.57□□□□□ -1.36
USP54-206ENST00000433394 DDX58O95786 925 aaKnown RBP6.57□□□□□ -1.36
USP54-206ENST00000433394 CHMP24386 653 aa6.57□□□□□ -1.36
USP54-206ENST00000433394 CYP3A7P24462 503 aa6.57□□□□□ -1.36
USP54-206ENST00000433394 ARL1P40616 181 aaPredicted RBP6.57□□□□□ -1.36
USP54-206ENST00000433394 FAM3BP58499 235 aaPredicted RBP6.57□□□□□ -1.36
USP54-206ENST00000433394 CDK18Q07002 472 aa6.57□□□□□ -1.36
USP54-206ENST00000433394 CAMK1Q14012 370 aa6.57□□□□□ -1.36
USP54-206ENST00000433394 LRRC24Q50LG9 513 aa6.57□□□□□ -1.36
USP54-206ENST00000433394 CC2D1BQ5T0F9 858 aaKnown RBP6.57□□□□□ -1.36
USP54-206ENST00000433394 ZCCHC10Q8TBK6 192 aa6.57□□□□□ -1.36
USP54-206ENST00000433394 KCNJ9Q92806 393 aa6.57□□□□□ -1.36
USP54-206ENST00000433394 ZNF503Q96F45 646 aa6.57□□□□□ -1.36
USP54-206ENST00000433394 TRMT61AQ96FX7 289 aaKnown RBP6.57□□□□□ -1.36
USP54-206ENST00000433394 HIC2Q96JB3 615 aa6.57□□□□□ -1.36
USP54-206ENST00000433394 CCDC17Q96LX7 622 aa6.57□□□□□ -1.36
USP54-206ENST00000433394 LENG8Q96PV6 779 aaPredicted RBP6.57□□□□□ -1.36
USP54-206ENST00000433394 MMS19Q96T76 1030 aa6.57□□□□□ -1.36
USP54-206ENST00000433394 NPAS1Q99742 590 aa6.57□□□□□ -1.36
USP54-206ENST00000433394 TAOK3Q9H2K8 898 aa6.57□□□□□ -1.36
USP54-206ENST00000433394 PPP1R14DQ9NXH3 145 aa6.57□□□□□ -1.36
USP54-206ENST00000433394 FZD4Q9ULV1 537 aa6.57□□□□□ -1.36
USP54-206ENST00000433394 HSF4Q9ULV5 492 aa6.57□□□□□ -1.36
USP54-206ENST00000433394 CYP46A1Q9Y6A2 500 aa6.57□□□□□ -1.36
USP54-206ENST00000433394 LMTK3Q96Q04 1460 aa6.56□□□□□ -1.36
USP54-206ENST00000433394 F5H0A9 414 aaPredicted RBP6.56□□□□□ -1.36
USP54-206ENST00000433394 M0QZQ0 153 aa6.56□□□□□ -1.36
USP54-206ENST00000433394 PRAMEF2O60811 474 aa6.56□□□□□ -1.36
USP54-206ENST00000433394 PDE8BO95263 885 aa6.56□□□□□ -1.36
USP54-206ENST00000433394 METTL18O95568 372 aa6.56□□□□□ -1.36
USP54-206ENST00000433394 CENPBP07199 599 aaPredicted RBP6.56□□□□□ -1.36
USP54-206ENST00000433394 CSF1P09603 554 aa6.56□□□□□ -1.36
USP54-206ENST00000433394 ELFN1P0C7U0 828 aa6.56□□□□□ -1.36
USP54-206ENST00000433394 RPS6KA3P51812 740 aa6.56□□□□□ -1.36
USP54-206ENST00000433394 NR1H2P55055 460 aa6.56□□□□□ -1.36
USP54-206ENST00000433394 DGCR2P98153 550 aa6.56□□□□□ -1.36
USP54-206ENST00000433394 PSG6Q00889 435 aa6.56□□□□□ -1.36
USP54-206ENST00000433394 GALNT2Q10471 571 aa6.56□□□□□ -1.36
USP54-206ENST00000433394 EFEMP1Q12805 493 aa6.56□□□□□ -1.36
USP54-206ENST00000433394 KCNB1Q14721 858 aa6.56□□□□□ -1.36
USP54-206ENST00000433394 MFSD13AQ14CX5 517 aa6.56□□□□□ -1.36
USP54-206ENST00000433394 CDSNQ15517 529 aa6.56□□□□□ -1.36
USP54-206ENST00000433394 CCDC30Q5VVM6 783 aa6.56□□□□□ -1.36
USP54-206ENST00000433394 CEP85Q6P2H3 762 aa6.56□□□□□ -1.36
USP54-206ENST00000433394 TERB1Q8NA31 727 aa6.56□□□□□ -1.36
USP54-206ENST00000433394 MAFAQ8NHW3 353 aaPredicted RBP6.56□□□□□ -1.36
USP54-206ENST00000433394 EDC3Q96F86 508 aaKnown RBP6.56□□□□□ -1.36
USP54-206ENST00000433394 PRR11Q96HE9 360 aaPredicted RBP6.56□□□□□ -1.36
USP54-206ENST00000433394 APOPT1Q96IL0 206 aa6.56□□□□□ -1.36
USP54-206ENST00000433394 TRIM31Q9BZY9 425 aa6.56□□□□□ -1.36
USP54-206ENST00000433394 STN1Q9H668 368 aaKnown RBP6.56□□□□□ -1.36
USP54-206ENST00000433394 KRT84Q9NSB2 600 aa6.56□□□□□ -1.36
USP54-206ENST00000433394 TBC1D22BQ9NU19 505 aa6.56□□□□□ -1.36
USP54-206ENST00000433394 ST3GAL5Q9UNP4 418 aa6.56□□□□□ -1.36
USP54-206ENST00000433394 HEMK1Q9Y5R4 338 aaPredicted RBP6.56□□□□□ -1.36
USP54-206ENST00000433394 SPATA31A1Q5TZJ5 1347 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 A0A087X0M5 115 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 A0A1B0GX30 115 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 ANKRD18BA2A2Z9 1011 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 TMEM191CA6NGB0 347 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 UBE2Q2LH0YL09 131 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 SYN3O14994 580 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 FYB1O15117 783 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 ZBED4O75132 1171 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 MT-CO3P00414 261 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 CYP21A2P08686 494 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 HSPA1AP0DMV8 641 aaKnown RBP6.55□□□□□ -1.36
USP54-206ENST00000433394 HSPA1BP0DMV9 641 aaKnown RBP6.55□□□□□ -1.36
USP54-206ENST00000433394 CYP4B1P13584 511 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 CAPN3P20807 821 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 GSTM2P28161 218 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 MCM7P33993 719 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 VPS41P49754 854 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 FOXL2P58012 376 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 SEC23BQ15437 767 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 PFKFB3Q16875 520 aaPredicted RBP6.55□□□□□ -1.36
USP54-206ENST00000433394 LCE4AQ5TA78 99 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 TTLL5Q6EMB2 1281 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 SLC22A25Q6T423 547 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 NAPRTQ6XQN6 538 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 TRIM72Q6ZMU5 477 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 DCDC5Q6ZRR9 648 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 ADGRG6Q86SQ4 1221 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms