RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 XPNPEP1Q9NQW7 623 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 PKP3Q9Y446 797 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 A0A1W2PRU2 124 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 ADH1CP00326 375 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 ADRB2P07550 413 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 KCNJ2P63252 427 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 ASTE1Q2TB18 679 aaPredicted RBP10.94□□□□□ -0.66
TCOF1-204ENST00000427724 PHACTR4Q8IZ21 702 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 CASP10Q92851 521 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 TM6SF2Q9BZW4 377 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 CCDC195A0A1B0GUA6 201 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 MICAL2O94851 1124 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 APODP05090 189 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 RBP3P10745 1247 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 TMPRSS15P98073 1019 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 LRRC36Q1X8D7 754 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 ARMC3Q5W041 872 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 FAM43BQ6ZT52 329 aaPredicted RBP10.93□□□□□ -0.66
TCOF1-204ENST00000427724 OOSP2Q86WS3 158 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 ARL14EPQ8N8R7 260 aaPredicted RBP10.93□□□□□ -0.66
TCOF1-204ENST00000427724 PIP4K2CQ8TBX8 421 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 SPATA18Q8TC71 538 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 DEPDC1BQ8WUY9 529 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 ERVK-5Q9HDB9 667 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 NPHS2Q9NP85 383 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 STK39Q9UEW8 545 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 NR2E1Q9Y466 385 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 E5RJQ4 531 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 NDUFS3O75489 264 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 ATP5HO75947 161 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 GZMAP12544 262 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 FSHRP23945 695 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 HIF1AQ16665 826 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 UNC93AQ86WB7 457 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 TEX9Q8N6V9 391 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 ULK4Q96C45 1275 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 ATXN7L3BQ96GX2 97 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 HES6Q96HZ4 224 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 FOPNLQ96NB1 174 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 SERPINB12Q96P63 405 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 SLC13A1Q9BZW2 595 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 ABCG4Q9H172 646 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 AGO3Q9H9G7 860 aaKnown RBP10.93□□□□□ -0.66
TCOF1-204ENST00000427724 ABCC13Q9NSE7 274 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 MAP10Q9P2G4 905 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 PPARGC1AQ9UBK2 798 aaKnown RBP10.93□□□□□ -0.66
TCOF1-204ENST00000427724 LAMA4Q16363 1823 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 A0A0B4J269 797 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 GPC4O75487 556 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 ESRRBO95718 433 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 JCHAINP01591 159 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 ZCCHC18P0CG32 403 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 KITP10721 976 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 GRAMD1BQ3KR37 738 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 GRASPQ7Z6J2 395 aaPredicted RBP10.93□□□□□ -0.66
TCOF1-204ENST00000427724 CPA6Q8N4T0 437 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 LRRC52Q8N7C0 313 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 GDPD5Q8WTR4 605 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 OSBPL7Q9BZF2 842 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 NT5MQ9NPB1 228 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 RAB6BQ9NRW1 208 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 CTNNAL1Q9UBT7 734 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 ZNF711Q9Y462 761 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 PCDHB9Q9Y5E1 797 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 GRIN2DO15399 1336 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 DUOX1Q9NRD9 1551 aa10.93□□□□□ -0.66
TCOF1-204ENST00000427724 IQANK1A0A1B0GTG1 560 aa10.92□□□□□ -0.66
TCOF1-204ENST00000427724 MDM4O15151 490 aa10.92□□□□□ -0.66
TCOF1-204ENST00000427724 TBL1XO60907 577 aa10.92□□□□□ -0.66
TCOF1-204ENST00000427724 HAUS5O94927 633 aa10.92□□□□□ -0.66
TCOF1-204ENST00000427724 NFATC1O95644 943 aa10.92□□□□□ -0.66
TCOF1-204ENST00000427724 TRUB2O95900 331 aaKnown RBP10.92□□□□□ -0.66
TCOF1-204ENST00000427724 LMNAP02545 664 aaKnown RBP10.92□□□□□ -0.66
TCOF1-204ENST00000427724 PBLDP30039 288 aaPredicted RBP10.92□□□□□ -0.66
TCOF1-204ENST00000427724 ARL2P36404 184 aa10.92□□□□□ -0.66
TCOF1-204ENST00000427724 MAGEA10P43363 369 aaPredicted RBP10.92□□□□□ -0.66
TCOF1-204ENST00000427724 DGKEP52429 567 aa10.92□□□□□ -0.66
TCOF1-204ENST00000427724 SEC13P55735 322 aa10.92□□□□□ -0.66
TCOF1-204ENST00000427724 MARSP56192 900 aaKnown RBP10.92□□□□□ -0.66
TCOF1-204ENST00000427724 MBTD1Q05BQ5 628 aa10.92□□□□□ -0.66
TCOF1-204ENST00000427724 PTRHD1Q6GMV3 140 aaKnown RBP10.92□□□□□ -0.66
TCOF1-204ENST00000427724 C11orf63Q6NUN7 778 aa10.92□□□□□ -0.66
TCOF1-204ENST00000427724 TTC7BQ86TV6 843 aa10.92□□□□□ -0.66
TCOF1-204ENST00000427724 DEFB123Q8N688 67 aa10.92□□□□□ -0.66
TCOF1-204ENST00000427724 PRELID2Q8N945 189 aa10.92□□□□□ -0.66
TCOF1-204ENST00000427724 GRAMD1AQ96CP6 724 aa10.92□□□□□ -0.66
TCOF1-204ENST00000427724 ZNF518BQ9C0D4 1074 aa10.92□□□□□ -0.66
TCOF1-204ENST00000427724 CDHR5Q9HBB8 845 aa10.92□□□□□ -0.66
TCOF1-204ENST00000427724 HAO1Q9UJM8 370 aa10.92□□□□□ -0.66
TCOF1-204ENST00000427724 AP4E1Q9UPM8 1137 aa10.92□□□□□ -0.66
TCOF1-204ENST00000427724 COPEO14579 308 aa10.92□□□□□ -0.66
TCOF1-204ENST00000427724 KRT37O76014 449 aa10.92□□□□□ -0.66
TCOF1-204ENST00000427724 PLCL1Q15111 1095 aa10.92□□□□□ -0.66
TCOF1-204ENST00000427724 ZBTB41Q5SVQ8 909 aa10.92□□□□□ -0.66
TCOF1-204ENST00000427724 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.92□□□□□ -0.66
TCOF1-204ENST00000427724 SYDE1Q6ZW31 735 aaPredicted RBP10.92□□□□□ -0.66
TCOF1-204ENST00000427724 FAM35AQ86V20 835 aa10.92□□□□□ -0.66
TCOF1-204ENST00000427724 SERINC5Q86VE9 423 aa10.92□□□□□ -0.66
TCOF1-204ENST00000427724 C2orf49Q9BVC5 232 aaPredicted RBP10.92□□□□□ -0.66
TCOF1-204ENST00000427724 ZCWPW1Q9H0M4 648 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms