RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 UBR7Q8N806 425 aa12.67□□□□□ -0.38
LIMS2-210ENST00000413578 KCTD13Q8WZ19 329 aa12.67□□□□□ -0.38
LIMS2-210ENST00000413578 GOLGA1Q92805 767 aa12.67□□□□□ -0.38
LIMS2-210ENST00000413578 TATDN2Q93075 761 aa12.67□□□□□ -0.38
LIMS2-210ENST00000413578 CRELD1Q96HD1 420 aa12.67□□□□□ -0.38
LIMS2-210ENST00000413578 IRX2Q9BZI1 471 aaPredicted RBP12.67□□□□□ -0.38
LIMS2-210ENST00000413578 RSPH9Q9H1X1 276 aaPredicted RBP12.67□□□□□ -0.38
LIMS2-210ENST00000413578 EBF2Q9HAK2 575 aa12.67□□□□□ -0.38
LIMS2-210ENST00000413578 COQ4Q9Y3A0 265 aa12.67□□□□□ -0.38
LIMS2-210ENST00000413578 GOLGA4Q13439 2230 aaKnown RBP12.67□□□□□ -0.38
LIMS2-210ENST00000413578 FLNBO75369 2602 aaKnown RBP12.66□□□□□ -0.38
LIMS2-210ENST00000413578 A0A1W2PPC4 97 aa12.66□□□□□ -0.38
LIMS2-210ENST00000413578 GOLGA8CPA6NN73 597 aa12.66□□□□□ -0.38
LIMS2-210ENST00000413578 VILLO15195 856 aa12.66□□□□□ -0.38
LIMS2-210ENST00000413578 DFNA5O60443 496 aa12.66□□□□□ -0.38
LIMS2-210ENST00000413578 FSBPO95073 299 aa12.66□□□□□ -0.38
LIMS2-210ENST00000413578 WNT1P04628 370 aa12.66□□□□□ -0.38
LIMS2-210ENST00000413578 RPL13P26373 211 aaKnown RBP12.66□□□□□ -0.38
LIMS2-210ENST00000413578 SLC8A3P57103 927 aa12.66□□□□□ -0.38
LIMS2-210ENST00000413578 ADIGQ0VDE8 80 aa12.66□□□□□ -0.38
LIMS2-210ENST00000413578 ARID5BQ14865 1188 aa12.66□□□□□ -0.38
LIMS2-210ENST00000413578 SHBQ15464 509 aa12.66□□□□□ -0.38
LIMS2-210ENST00000413578 EDRF1Q3B7T1 1238 aa12.66□□□□□ -0.38
LIMS2-210ENST00000413578 TTC31Q49AM3 519 aaPredicted RBP12.66□□□□□ -0.38
LIMS2-210ENST00000413578 PIK3R6Q5UE93 754 aa12.66□□□□□ -0.38
LIMS2-210ENST00000413578 KIAA0895LQ68EN5 471 aa12.66□□□□□ -0.38
LIMS2-210ENST00000413578 DHRS13Q6UX07 377 aa12.66□□□□□ -0.38
LIMS2-210ENST00000413578 TMPRSS12Q86WS5 348 aa12.66□□□□□ -0.38
LIMS2-210ENST00000413578 EDEM1Q92611 657 aa12.66□□□□□ -0.38
LIMS2-210ENST00000413578 TTC17Q96AE7 1141 aa12.66□□□□□ -0.38
LIMS2-210ENST00000413578 EEF2KMTQ96G04 330 aa12.66□□□□□ -0.38
LIMS2-210ENST00000413578 MRGPRX3Q96LB0 322 aa12.66□□□□□ -0.38
LIMS2-210ENST00000413578 PABPC3Q9H361 631 aaKnown RBP12.66□□□□□ -0.38
LIMS2-210ENST00000413578 MTG2Q9H4K7 406 aa12.66□□□□□ -0.38
LIMS2-210ENST00000413578 ABCC13Q9NSE7 274 aa12.66□□□□□ -0.38
LIMS2-210ENST00000413578 SERGEFQ9UGK8 458 aa12.66□□□□□ -0.38
LIMS2-210ENST00000413578 SUN2Q9UH99 717 aa12.66□□□□□ -0.38
LIMS2-210ENST00000413578 INTS6Q9UL03 887 aaKnown RBP12.66□□□□□ -0.38
LIMS2-210ENST00000413578 MAPK8IP1Q9UQF2 711 aa12.66□□□□□ -0.38
LIMS2-210ENST00000413578 PCDHGA1Q9Y5H4 931 aa12.66□□□□□ -0.38
LIMS2-210ENST00000413578 MYH10P35580 1976 aa12.66□□□□□ -0.38
LIMS2-210ENST00000413578 KNTC1P50748 2209 aa12.65□□□□□ -0.38
LIMS2-210ENST00000413578 O00370 1275 aa12.65□□□□□ -0.38
LIMS2-210ENST00000413578 ATP5BP06576 529 aaKnown RBP12.65□□□□□ -0.38
LIMS2-210ENST00000413578 SLC6A4P31645 630 aa12.65□□□□□ -0.38
LIMS2-210ENST00000413578 GALCP54803 685 aa12.65□□□□□ -0.38
LIMS2-210ENST00000413578 DAOAP59103 153 aa12.65□□□□□ -0.38
LIMS2-210ENST00000413578 IL9RQ01113 521 aa12.65□□□□□ -0.38
LIMS2-210ENST00000413578 CUL2Q13617 745 aa12.65□□□□□ -0.38
LIMS2-210ENST00000413578 HNRNPA1L2Q32P51 320 aaKnown RBP12.65□□□□□ -0.38
LIMS2-210ENST00000413578 CBWD6Q4V339 395 aa12.65□□□□□ -0.38
LIMS2-210ENST00000413578 SGO2Q562F6 1265 aa12.65□□□□□ -0.38
LIMS2-210ENST00000413578 CBWD3Q5JTY5 395 aa12.65□□□□□ -0.38
LIMS2-210ENST00000413578 CBWD5Q5RIA9 395 aa12.65□□□□□ -0.38
LIMS2-210ENST00000413578 NADSYN1Q6IA69 706 aa12.65□□□□□ -0.38
LIMS2-210ENST00000413578 RFWD3Q6PCD5 774 aa12.65□□□□□ -0.38
LIMS2-210ENST00000413578 KDM1BQ8NB78 822 aa12.65□□□□□ -0.38
LIMS2-210ENST00000413578 RNF139Q8WU17 664 aa12.65□□□□□ -0.38
LIMS2-210ENST00000413578 AZIN2Q96A70 460 aa12.65□□□□□ -0.38
LIMS2-210ENST00000413578 MYEOVQ96EZ4 313 aa12.65□□□□□ -0.38
LIMS2-210ENST00000413578 PRICKLE1Q96MT3 831 aaPredicted RBP12.65□□□□□ -0.38
LIMS2-210ENST00000413578 SLC6A18Q96N87 628 aa12.65□□□□□ -0.38
LIMS2-210ENST00000413578 ELF4Q99607 663 aaPredicted RBP12.65□□□□□ -0.38
LIMS2-210ENST00000413578 LRRC4Q9HBW1 653 aa12.65□□□□□ -0.38
LIMS2-210ENST00000413578 CNGB3Q9NQW8 809 aa12.65□□□□□ -0.38
LIMS2-210ENST00000413578 FTSJ1Q9UET6 329 aa12.65□□□□□ -0.38
LIMS2-210ENST00000413578 ADAMTS1Q9UHI8 967 aa12.65□□□□□ -0.38
LIMS2-210ENST00000413578 SCML1Q9UN30 329 aa12.65□□□□□ -0.38
LIMS2-210ENST00000413578 SETXQ7Z333 2677 aaKnown RBP12.65□□□□□ -0.39
LIMS2-210ENST00000413578 GOLGA6L7A0A1B0GV03 622 aa12.64□□□□□ -0.39
LIMS2-210ENST00000413578 A0A1W2PR77 199 aa12.64□□□□□ -0.39
LIMS2-210ENST00000413578 IRAK2O43187 625 aa12.64□□□□□ -0.39
LIMS2-210ENST00000413578 SIN3BO75182 1162 aa12.64□□□□□ -0.39
LIMS2-210ENST00000413578 SETSIPP0DME0 302 aa12.64□□□□□ -0.39
LIMS2-210ENST00000413578 POLR2EP19388 210 aaKnown RBP12.64□□□□□ -0.39
LIMS2-210ENST00000413578 SYKP43405 635 aa12.64□□□□□ -0.39
LIMS2-210ENST00000413578 NDUFA8P51970 172 aa12.64□□□□□ -0.39
LIMS2-210ENST00000413578 KCNJ12Q14500 433 aa12.64□□□□□ -0.39
LIMS2-210ENST00000413578 INAVAQ3KP66 663 aa12.64□□□□□ -0.39
LIMS2-210ENST00000413578 ZNF557Q8N988 423 aaPredicted RBP12.64□□□□□ -0.39
LIMS2-210ENST00000413578 ENGASEQ8NFI3 743 aa12.64□□□□□ -0.39
LIMS2-210ENST00000413578 FIBINQ8TAL6 211 aa12.64□□□□□ -0.39
LIMS2-210ENST00000413578 SAP25Q8TEE9 199 aa12.64□□□□□ -0.39
LIMS2-210ENST00000413578 SLC35F5Q8WV83 523 aa12.64□□□□□ -0.39
LIMS2-210ENST00000413578 TSC1Q92574 1164 aa12.64□□□□□ -0.39
LIMS2-210ENST00000413578 IPO9Q96P70 1041 aaKnown RBP12.64□□□□□ -0.39
LIMS2-210ENST00000413578 ACE2Q9BYF1 805 aaPredicted RBP12.64□□□□□ -0.39
LIMS2-210ENST00000413578 FBXL12Q9NXK8 326 aa12.64□□□□□ -0.39
LIMS2-210ENST00000413578 HESX1Q9UBX0 185 aa12.64□□□□□ -0.39
LIMS2-210ENST00000413578 COL5A1P20908 1838 aaPredicted RBP12.64□□□□□ -0.39
LIMS2-210ENST00000413578 CBX4O00257 560 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 PLK4O00444 970 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 WNT9AO14904 365 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 MID1O15344 667 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 ACSL4O60488 711 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 STX10O60499 249 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 TBL1XO60907 577 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 ASLP04424 464 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 C1SP09871 688 aa12.63□□□□□ -0.39
LIMS2-210ENST00000413578 VDRP11473 427 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms