RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 GP5P40197 560 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 GARSP41250 739 aaKnown RBP17.14■□□□□ 0.33
LIMS2-208ENST00000410011 BAG6P46379 1132 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 IDH3AP50213 366 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 COPAP53621 1224 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 XIAPP98170 497 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 PDK1Q15118 436 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 SLC25A52Q3SY17 297 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 MDH1BQ5I0G3 518 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 SPANXN3Q5MJ09 141 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 NAIF1Q69YI7 327 aaPredicted RBP17.14■□□□□ 0.33
LIMS2-208ENST00000410011 C16orf46Q6P387 395 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 CASC4Q6P4E1 433 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 ALKAL1Q6UXT8 129 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 BNIPLQ7Z465 357 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 OR6B3Q8NGW1 331 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 CMTM5Q96DZ9 223 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 CLMNQ96JQ2 1002 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 ZMAT2Q96NC0 199 aaKnown RBP17.14■□□□□ 0.33
LIMS2-208ENST00000410011 ECSITQ9BQ95 431 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 C16orf70Q9BSU1 422 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 S100A14Q9HCY8 104 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 RBM47A0AV96 593 aaKnown RBP17.14■□□□□ 0.33
LIMS2-208ENST00000410011 BUD23O43709 281 aaKnown RBP17.14■□□□□ 0.33
LIMS2-208ENST00000410011 SMIM24O75264 130 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 POLBP06746 335 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 MX2P20592 715 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 CACNA2D1P54289 1103 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 PDE1BQ01064 536 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 DPY19L2Q6NUT2 758 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 TAPT1Q6NXT6 567 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 UNC5BQ8IZJ1 945 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 CLEC4CQ8WTT0 213 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 NT5C3BQ969T7 300 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 P2RY11Q96G91 374 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 MAGEB5Q9BZ81 275 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 RALGAPA2Q2PPJ7 1873 aa17.13■□□□□ 0.33
LIMS2-208ENST00000410011 SCN1AP35498 2009 aa17.13■□□□□ 0.33
LIMS2-208ENST00000410011 KCNA4P22459 653 aa17.13■□□□□ 0.33
LIMS2-208ENST00000410011 MGAT1P26572 445 aa17.13■□□□□ 0.33
LIMS2-208ENST00000410011 IREB2P48200 963 aaKnown RBP17.13■□□□□ 0.33
LIMS2-208ENST00000410011 ABCE1P61221 599 aaKnown RBP17.13■□□□□ 0.33
LIMS2-208ENST00000410011 DEUP1Q05D60 604 aa17.13■□□□□ 0.33
LIMS2-208ENST00000410011 PAFAH1B3Q15102 231 aaKnown RBP17.13■□□□□ 0.33
LIMS2-208ENST00000410011 PCBP1Q15365 356 aaKnown RBP eCLIP17.13■□□□□ 0.332e-6■■■■■ 32.7
LIMS2-208ENST00000410011 METTL21CQ5VZV1 264 aa17.13■□□□□ 0.33
LIMS2-208ENST00000410011 LIMS2Q7Z4I7 341 aa17.13■□□□□ 0.33
LIMS2-208ENST00000410011 C10orf107Q8IVU9 208 aa17.13■□□□□ 0.33
LIMS2-208ENST00000410011 CCDC33Q8N5R6 958 aa17.13■□□□□ 0.33
LIMS2-208ENST00000410011 ZFAND2BQ8WV99 257 aa17.13■□□□□ 0.33
LIMS2-208ENST00000410011 PPP2R3CQ969Q6 453 aa17.13■□□□□ 0.33
LIMS2-208ENST00000410011 TSPAN18Q96SJ8 248 aa17.13■□□□□ 0.33
LIMS2-208ENST00000410011 LGMNQ99538 433 aa17.13■□□□□ 0.33
LIMS2-208ENST00000410011 RNF103O00237 685 aa17.13■□□□□ 0.33
LIMS2-208ENST00000410011 PPEF2O14830 753 aa17.13■□□□□ 0.33
LIMS2-208ENST00000410011 LYPLA1O75608 230 aaPredicted RBP17.13■□□□□ 0.33
LIMS2-208ENST00000410011 RALBP11234 206 aa17.13■□□□□ 0.33
LIMS2-208ENST00000410011 HOXA11P31270 313 aaPredicted RBP17.13■□□□□ 0.33
LIMS2-208ENST00000410011 PEX19P40855 299 aa17.13■□□□□ 0.33
LIMS2-208ENST00000410011 CDC42EP1Q00587 391 aa17.13■□□□□ 0.33
LIMS2-208ENST00000410011 C9orf57Q5W0N0 161 aa17.13■□□□□ 0.33
LIMS2-208ENST00000410011 MAMDC4Q6UXC1 1216 aa17.13■□□□□ 0.33
LIMS2-208ENST00000410011 RFX8Q6ZV50 586 aa17.13■□□□□ 0.33
LIMS2-208ENST00000410011 ARMCX2Q7L311 632 aa17.13■□□□□ 0.33
LIMS2-208ENST00000410011 MAVSQ7Z434 540 aa17.13■□□□□ 0.33
LIMS2-208ENST00000410011 PPP1R16BQ96T49 567 aa17.13■□□□□ 0.33
LIMS2-208ENST00000410011 VTA1Q9NP79 307 aa17.13■□□□□ 0.33
LIMS2-208ENST00000410011 GDAP2Q9NXN4 497 aa17.13■□□□□ 0.33
LIMS2-208ENST00000410011 RAD54BQ9Y620 910 aa17.13■□□□□ 0.33
LIMS2-208ENST00000410011 PIM1P11309 404 aaPredicted RBP17.12■□□□□ 0.33
LIMS2-208ENST00000410011 TYK2P29597 1187 aa17.12■□□□□ 0.33
LIMS2-208ENST00000410011 RPL26P61254 145 aaKnown RBP17.12■□□□□ 0.33
LIMS2-208ENST00000410011 IRX4P78413 519 aa17.12■□□□□ 0.33
LIMS2-208ENST00000410011 SLC27A1Q6PCB7 646 aa17.12■□□□□ 0.33
LIMS2-208ENST00000410011 SLC30A9Q6PML9 568 aa17.12■□□□□ 0.33
LIMS2-208ENST00000410011 IZUMO2Q6UXV1 221 aa17.12■□□□□ 0.33
LIMS2-208ENST00000410011 KBTBD7Q8WVZ9 684 aa17.12■□□□□ 0.33
LIMS2-208ENST00000410011 CERS2Q96G23 380 aa17.12■□□□□ 0.33
LIMS2-208ENST00000410011 VCX3BQ9H321 246 aa17.12■□□□□ 0.33
LIMS2-208ENST00000410011 DPEP3Q9H4B8 488 aa17.12■□□□□ 0.33
LIMS2-208ENST00000410011 TMEM216Q9P0N5 145 aa17.12■□□□□ 0.33
LIMS2-208ENST00000410011 TXNDC16Q9P2K2 825 aa17.12■□□□□ 0.33
LIMS2-208ENST00000410011 PPM1HQ9ULR3 514 aa17.12■□□□□ 0.33
LIMS2-208ENST00000410011 PCDHB12Q9Y5F1 795 aa17.12■□□□□ 0.33
LIMS2-208ENST00000410011 PSAT1Q9Y617 370 aa17.12■□□□□ 0.33
LIMS2-208ENST00000410011 MCM3APO60318 1980 aa17.12■□□□□ 0.33
LIMS2-208ENST00000410011 POLR2AP24928 1970 aaKnown RBP17.12■□□□□ 0.33
LIMS2-208ENST00000410011 PIRO00625 290 aa17.12■□□□□ 0.33
LIMS2-208ENST00000410011 MFSD11O43934 449 aa17.12■□□□□ 0.33
LIMS2-208ENST00000410011 CPA3P15088 417 aa17.12■□□□□ 0.33
LIMS2-208ENST00000410011 SESN2P58004 480 aaPredicted RBP17.12■□□□□ 0.33
LIMS2-208ENST00000410011 MARCH8Q5T0T0 291 aa17.12■□□□□ 0.33
LIMS2-208ENST00000410011 GALNT15Q8N3T1 639 aa17.12■□□□□ 0.33
LIMS2-208ENST00000410011 C7orf31Q8N865 590 aa17.12■□□□□ 0.33
LIMS2-208ENST00000410011 OTUD5Q96G74 571 aa17.12■□□□□ 0.33
LIMS2-208ENST00000410011 SNTG2Q9NY99 539 aa17.12■□□□□ 0.33
LIMS2-208ENST00000410011 CDY2AQ9Y6F7 541 aa17.12■□□□□ 0.33
LIMS2-208ENST00000410011 CDY1Q9Y6F8 540 aa17.12■□□□□ 0.33
LIMS2-208ENST00000410011 OTOFQ9HC10 1997 aa17.11■□□□□ 0.33
LIMS2-208ENST00000410011 TRIP11Q15643 1979 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms