RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 MGEA5O60502 916 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 STK10O94804 968 aaKnown RBP7.75□□□□□ -1.17
CXCR4-202ENST00000409817 GSTA2P09210 222 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 CCT5P48643 541 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 HCAR3P49019 387 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 MAP3K7CLP57077 242 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 CDK16Q00536 496 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 TSPY1Q01534 308 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 DEUP1Q05D60 604 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 CA9Q16790 459 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 SKIDA1Q1XH10 827 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 ARL13BQ3SXY8 428 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 RAB6CQ53S08 254 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 EFHC2Q5JST6 749 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 KIAA0319Q5VV43 1072 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 GLB1LQ6UWU2 654 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 ARHGEF18Q6ZSZ5 1173 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 SLC24A5Q71RS6 500 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 PRICKLE2Q7Z3G6 844 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 C3orf58Q8NDZ4 430 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 ZNF473Q8WTR7 871 aaKnown RBP7.75□□□□□ -1.17
CXCR4-202ENST00000409817 RSPH1Q8WYR4 309 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 CHMP6Q96FZ7 201 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 SGSM3Q96HU1 749 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 PWWP2AQ96N64 755 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 QKIQ96PU8 341 aaKnown RBP eCLIP7.75□□□□□ -1.17
CXCR4-202ENST00000409817 SMOQ99835 787 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 BRD8Q9H0E9 1235 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 RAB6CQ9H0N0 254 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 VPS37BQ9H9H4 285 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 DMAP1Q9NPF5 467 aaPredicted RBP7.75□□□□□ -1.17
CXCR4-202ENST00000409817 PPANQ9NQ55 473 aaKnown RBP7.75□□□□□ -1.17
CXCR4-202ENST00000409817 GPATCH2LQ9NWQ4 482 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 RSPH14Q9UHP6 348 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 NAALADL1Q9UQQ1 740 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 HEY1Q9Y5J3 304 aa7.75□□□□□ -1.17
CXCR4-202ENST00000409817 TDRD15B5MCY1 1934 aaKnown RBP7.74□□□□□ -1.17
CXCR4-202ENST00000409817 M0QYT0 321 aa7.74□□□□□ -1.17
CXCR4-202ENST00000409817 NCAM2O15394 837 aa7.74□□□□□ -1.17
CXCR4-202ENST00000409817 BEST1O76090 585 aa7.74□□□□□ -1.17
CXCR4-202ENST00000409817 LTFP02788 710 aa7.74□□□□□ -1.17
CXCR4-202ENST00000409817 CKBP12277 381 aa7.74□□□□□ -1.17
CXCR4-202ENST00000409817 TFE3P19532 575 aaPredicted RBP7.74□□□□□ -1.17
CXCR4-202ENST00000409817 TPSB2P20231 275 aa7.74□□□□□ -1.17
CXCR4-202ENST00000409817 RBL1P28749 1068 aa7.74□□□□□ -1.17
CXCR4-202ENST00000409817 GRNP28799 593 aaKnown RBP7.74□□□□□ -1.17
CXCR4-202ENST00000409817 CYP2C18P33260 490 aa7.74□□□□□ -1.17
CXCR4-202ENST00000409817 FDFT1P37268 417 aa7.74□□□□□ -1.17
CXCR4-202ENST00000409817 GEMIN4P57678 1058 aaKnown RBP7.74□□□□□ -1.17
CXCR4-202ENST00000409817 FAM189BP81408 668 aa7.74□□□□□ -1.17
CXCR4-202ENST00000409817 SARNPP82979 210 aaKnown RBP7.74□□□□□ -1.17
CXCR4-202ENST00000409817 PDK1Q15118 436 aa7.74□□□□□ -1.17
CXCR4-202ENST00000409817 TPSAB1Q15661 275 aa7.74□□□□□ -1.17
CXCR4-202ENST00000409817 UBAP2Q5T6F2 1119 aaKnown RBP7.74□□□□□ -1.17
CXCR4-202ENST00000409817 HEATR6Q6AI08 1181 aaKnown RBP7.74□□□□□ -1.17
CXCR4-202ENST00000409817 PM20D1Q6GTS8 502 aa7.74□□□□□ -1.17
CXCR4-202ENST00000409817 OVOS1Q6IE37 1185 aa7.74□□□□□ -1.17
CXCR4-202ENST00000409817 NPNTQ6UXI9 565 aa7.74□□□□□ -1.17
CXCR4-202ENST00000409817 C4orf50Q6ZRC1 276 aa7.74□□□□□ -1.17
CXCR4-202ENST00000409817 YTHDF3Q7Z739 585 aaKnown RBP7.74□□□□□ -1.17
CXCR4-202ENST00000409817 PALM2Q8IXS6 379 aa7.74□□□□□ -1.17
CXCR4-202ENST00000409817 VPS52Q8N1B4 723 aa7.74□□□□□ -1.17
CXCR4-202ENST00000409817 CCDC185Q8N715 623 aa7.74□□□□□ -1.17
CXCR4-202ENST00000409817 URGCPQ8TCY9 931 aa7.74□□□□□ -1.17
CXCR4-202ENST00000409817 TFB1MQ8WVM0 346 aaKnown RBP7.74□□□□□ -1.17
CXCR4-202ENST00000409817 ATXN2LQ8WWM7 1075 aaKnown RBP7.74□□□□□ -1.17
CXCR4-202ENST00000409817 MAML1Q92585 1016 aa7.74□□□□□ -1.17
CXCR4-202ENST00000409817 OLFM3Q96PB7 478 aa7.74□□□□□ -1.17
CXCR4-202ENST00000409817 ULBP1Q9BZM6 244 aa7.74□□□□□ -1.17
CXCR4-202ENST00000409817 NSRP1Q9H0G5 558 aaKnown RBP7.74□□□□□ -1.17
CXCR4-202ENST00000409817 ACSS3Q9H6R3 686 aa7.74□□□□□ -1.17
CXCR4-202ENST00000409817 SSU72Q9NP77 194 aaKnown RBP7.74□□□□□ -1.17
CXCR4-202ENST00000409817 TRMT13Q9NUP7 481 aaKnown RBP7.74□□□□□ -1.17
CXCR4-202ENST00000409817 PSMC3IPQ9P2W1 217 aaPredicted RBP7.74□□□□□ -1.17
CXCR4-202ENST00000409817 SMG5Q9UPR3 1016 aaKnown RBP7.74□□□□□ -1.17
CXCR4-202ENST00000409817 CLUHO75153 1309 aa7.73□□□□□ -1.17
CXCR4-202ENST00000409817 TMEM120BA0PK00 339 aa7.73□□□□□ -1.17
CXCR4-202ENST00000409817 RASA4BC9J798 803 aa7.73□□□□□ -1.17
CXCR4-202ENST00000409817 HHLA1C9JL84 531 aa7.73□□□□□ -1.17
CXCR4-202ENST00000409817 PPP1R12AO14974 1030 aaPredicted RBP7.73□□□□□ -1.17
CXCR4-202ENST00000409817 RASA4O43374 803 aa7.73□□□□□ -1.17
CXCR4-202ENST00000409817 DGKIO75912 1065 aa7.73□□□□□ -1.17
CXCR4-202ENST00000409817 TMEM63AO94886 807 aa7.73□□□□□ -1.17
CXCR4-202ENST00000409817 POMCP01189 267 aa7.73□□□□□ -1.17
CXCR4-202ENST00000409817 BRAFP15056 766 aa7.73□□□□□ -1.17
CXCR4-202ENST00000409817 HTR7P34969 479 aa7.73□□□□□ -1.17
CXCR4-202ENST00000409817 ADRA1BP35368 520 aa7.73□□□□□ -1.17
CXCR4-202ENST00000409817 MAP2K2P36507 400 aa7.73□□□□□ -1.17
CXCR4-202ENST00000409817 GLUD2P49448 558 aa7.73□□□□□ -1.17
CXCR4-202ENST00000409817 AFF1P51825 1210 aaKnown RBP7.73□□□□□ -1.17
CXCR4-202ENST00000409817 DAB2P98082 770 aa7.73□□□□□ -1.17
CXCR4-202ENST00000409817 PAFAH1B3Q15102 231 aaKnown RBP7.73□□□□□ -1.17
CXCR4-202ENST00000409817 GKAP1Q5VSY0 366 aaPredicted RBP7.73□□□□□ -1.17
CXCR4-202ENST00000409817 OTUD1Q5VV17 481 aaPredicted RBP7.73□□□□□ -1.17
CXCR4-202ENST00000409817 ANKRD22Q5VYY1 191 aa7.73□□□□□ -1.17
CXCR4-202ENST00000409817 NCBP2-AS2Q69YL0 99 aa7.73□□□□□ -1.17
CXCR4-202ENST00000409817 MRPL14Q6P1L8 145 aaKnown RBP7.73□□□□□ -1.17
CXCR4-202ENST00000409817 C3orf62Q6ZUJ4 267 aa7.73□□□□□ -1.17
CXCR4-202ENST00000409817 FAM131BQ86XD5 332 aa7.73□□□□□ -1.17
CXCR4-202ENST00000409817 CCDC13Q8IYE1 715 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms