RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 CD320Q9NPF0 282 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 TMEM221A6NGB7 291 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 M0R296 226 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 RHOQP17081 205 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 HOXD9P28356 352 aaPredicted RBP7.78□□□□□ -1.16
USP16-204ENST00000399976 SSTR3P32745 418 aaPredicted RBP7.78□□□□□ -1.16
USP16-204ENST00000399976 MAGEA1P43355 309 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 CLCN6P51797 869 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 CCZ1BP86790 482 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 CCZ1P86791 482 aaPredicted RBP7.78□□□□□ -1.16
USP16-204ENST00000399976 SLC25A11Q02978 314 aaKnown RBP7.78□□□□□ -1.16
USP16-204ENST00000399976 EFHC2Q5JST6 749 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 ERMARDQ5T6L9 678 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 AFMIDQ63HM1 303 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 CYP4V2Q6ZWL3 525 aaPredicted RBP7.78□□□□□ -1.16
USP16-204ENST00000399976 AHI1Q8N157 1196 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 PJA1Q8NG27 643 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 FAM172AQ8WUF8 416 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 EDEM1Q92611 657 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 NELL1Q92832 810 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 CHFRQ96EP1 664 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 ZNF670Q9BS34 389 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.78□□□□□ -1.16
USP16-204ENST00000399976 PRMT8Q9NR22 394 aaPredicted RBP7.78□□□□□ -1.16
USP16-204ENST00000399976 DLGAP2Q9P1A6 1054 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 ILVBLA1L0T0 632 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 MYO1FO00160 1098 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 LRCH4O75427 683 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 GEMIN4P57678 1058 aaKnown RBP7.78□□□□□ -1.16
USP16-204ENST00000399976 SLC20A2Q08357 652 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 ASTLQ6HA08 431 aaPredicted RBP7.78□□□□□ -1.16
USP16-204ENST00000399976 LRRC31Q6UY01 552 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 ZSCAN30Q86W11 494 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 NLRP14Q86W24 1093 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 ACDQ96AP0 544 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 EPAS1Q99814 870 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 COL25A1Q9BXS0 654 aaPredicted RBP7.78□□□□□ -1.16
USP16-204ENST00000399976 CATSPERBQ9H7T0 1116 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 SEPT11Q9NVA2 429 aaKnown RBP7.78□□□□□ -1.16
USP16-204ENST00000399976 MYO1AQ9UBC5 1043 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 AMACRQ9UHK6 382 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 FBXO4Q9UKT5 387 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 TPX2Q9ULW0 747 aaKnown RBP7.78□□□□□ -1.16
USP16-204ENST00000399976 HS3ST4Q9Y661 456 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 PIAS3Q9Y6X2 628 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 MYO10Q9HD67 2058 aa7.78□□□□□ -1.16
USP16-204ENST00000399976 ZSCAN5CA6NGD5 496 aaPredicted RBP7.77□□□□□ -1.16
USP16-204ENST00000399976 MIF4GDA9UHW6 222 aaKnown RBP7.77□□□□□ -1.16
USP16-204ENST00000399976 ALOX15BO15296 676 aa7.77□□□□□ -1.16
USP16-204ENST00000399976 APODP05090 189 aa7.77□□□□□ -1.16
USP16-204ENST00000399976 PSMA2P25787 234 aa7.77□□□□□ -1.16
USP16-204ENST00000399976 NDST2P52849 883 aa7.77□□□□□ -1.16
USP16-204ENST00000399976 OGDHQ02218 1023 aa7.77□□□□□ -1.16
USP16-204ENST00000399976 TAF5Q15542 800 aa7.77□□□□□ -1.16
USP16-204ENST00000399976 GRAMD4Q6IC98 578 aa7.77□□□□□ -1.16
USP16-204ENST00000399976 RAD9BQ6WBX8 426 aa7.77□□□□□ -1.16
USP16-204ENST00000399976 CCDC105Q8IYK2 499 aa7.77□□□□□ -1.16
USP16-204ENST00000399976 UMODL1-AS1Q8N2C9 162 aa7.77□□□□□ -1.16
USP16-204ENST00000399976 TBC1D31Q96DN5 1066 aa7.77□□□□□ -1.16
USP16-204ENST00000399976 PRICKLE1Q96MT3 831 aaPredicted RBP7.77□□□□□ -1.16
USP16-204ENST00000399976 GABRG3Q99928 467 aa7.77□□□□□ -1.16
USP16-204ENST00000399976 P2RY13Q9BPV8 354 aa7.77□□□□□ -1.16
USP16-204ENST00000399976 KIAA1522Q9P206 1035 aaPredicted RBP7.77□□□□□ -1.16
USP16-204ENST00000399976 SFMBT1Q9UHJ3 866 aa7.77□□□□□ -1.16
USP16-204ENST00000399976 MUTYHQ9UIF7 546 aa7.77□□□□□ -1.16
USP16-204ENST00000399976 PAGE1O75459 146 aa7.77□□□□□ -1.17
USP16-204ENST00000399976 TBX18O95935 607 aa7.77□□□□□ -1.17
USP16-204ENST00000399976 RPL7AP62424 266 aaKnown RBP7.77□□□□□ -1.17
USP16-204ENST00000399976 GRSF1Q12849 480 aaKnown RBP eCLIP7.77□□□□□ -1.17
USP16-204ENST00000399976 IFRD2Q12894 506 aaPredicted RBP7.77□□□□□ -1.17
USP16-204ENST00000399976 FZD5Q13467 585 aa7.77□□□□□ -1.17
USP16-204ENST00000399976 SLC14A2Q15849 920 aa7.77□□□□□ -1.17
USP16-204ENST00000399976 PPP2R5EQ16537 467 aa7.77□□□□□ -1.17
USP16-204ENST00000399976 RALGPS1Q5JS13 557 aa7.77□□□□□ -1.17
USP16-204ENST00000399976 CWF19L1Q69YN2 538 aaKnown RBP7.77□□□□□ -1.17
USP16-204ENST00000399976 ANKS1BQ7Z6G8 1248 aa7.77□□□□□ -1.17
USP16-204ENST00000399976 FBXL6Q8N531 539 aa7.77□□□□□ -1.17
USP16-204ENST00000399976 TERB1Q8NA31 727 aa7.77□□□□□ -1.17
USP16-204ENST00000399976 SLC35G2Q8TBE7 412 aa7.77□□□□□ -1.17
USP16-204ENST00000399976 FAM3CQ92520 227 aa7.77□□□□□ -1.17
USP16-204ENST00000399976 CFAP57Q96MR6 1250 aa7.77□□□□□ -1.17
USP16-204ENST00000399976 ADAM33Q9BZ11 813 aa7.77□□□□□ -1.17
USP16-204ENST00000399976 ZYG11BQ9C0D3 744 aa7.77□□□□□ -1.17
USP16-204ENST00000399976 CEP44Q9C0F1 390 aa7.77□□□□□ -1.17
USP16-204ENST00000399976 BRD8Q9H0E9 1235 aa7.77□□□□□ -1.17
USP16-204ENST00000399976 TKTL2Q9H0I9 626 aa7.77□□□□□ -1.17
USP16-204ENST00000399976 MAGEH1Q9H213 219 aa7.77□□□□□ -1.17
USP16-204ENST00000399976 CALCOCO1Q9P1Z2 691 aa7.77□□□□□ -1.17
USP16-204ENST00000399976 REXO2Q9Y3B8 237 aaKnown RBP7.77□□□□□ -1.17
USP16-204ENST00000399976 ADGRG1Q9Y653 693 aa7.77□□□□□ -1.17
USP16-204ENST00000399976 KRBA1A5PL33 1030 aa7.77□□□□□ -1.17
USP16-204ENST00000399976 GOLGA8SH3BPF8 625 aa7.77□□□□□ -1.17
USP16-204ENST00000399976 KRT86O43790 486 aa7.77□□□□□ -1.17
USP16-204ENST00000399976 CCDC175P0C221 793 aa7.77□□□□□ -1.17
USP16-204ENST00000399976 SLC6A4P31645 630 aa7.77□□□□□ -1.17
USP16-204ENST00000399976 AUHQ13825 339 aaKnown RBP7.77□□□□□ -1.17
USP16-204ENST00000399976 RFTN1Q14699 578 aaPredicted RBP7.77□□□□□ -1.17
USP16-204ENST00000399976 PARP15Q460N3 678 aa7.77□□□□□ -1.17
USP16-204ENST00000399976 ZC3H12AQ5D1E8 599 aaKnown RBP7.77□□□□□ -1.17
USP16-204ENST00000399976 C6orf118Q5T5N4 469 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms