RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 WASHC2CQ9Y4E1 1318 aa0.65□□□□□ -2.3
SNORD28-201ENST00000384706 SNED1Q8TER0 1413 aa0.65□□□□□ -2.3
SNORD28-201ENST00000384706 MUC19Q7Z5P9 8384 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 A0A1B0GU03 582 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 CFAP69A5D8W1 941 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 MBD3L4A6NDZ8 208 aaPredicted RBP0.65□□□□□ -2.31
SNORD28-201ENST00000384706 MBD3L3A6NE82 208 aaPredicted RBP0.65□□□□□ -2.31
SNORD28-201ENST00000384706 GAGE12JA6NER3 117 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 FOXO6A8MYZ6 492 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 ALG1L2C9J202 215 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 TBX3O15119 743 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 ZG16O60844 167 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 OFD1O75665 1012 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 UBXN7O94888 489 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 CT47B1P0C2W7 299 aaPredicted RBP0.65□□□□□ -2.31
SNORD28-201ENST00000384706 RFPL3SP0C7P2 107 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 TXNP10599 105 aaKnown RBP0.65□□□□□ -2.31
SNORD28-201ENST00000384706 PF4V1P10720 104 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 ALADP13716 330 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 BRAFP15056 766 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 ZNF12P17014 697 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 VCAM1P19320 739 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 EN2P19622 333 aaPredicted RBP0.65□□□□□ -2.31
SNORD28-201ENST00000384706 AZU1P20160 251 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 ACVR2AP27037 513 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 SLC8A1P32418 973 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 HTR7P34969 479 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 KRT2P35908 639 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 CDKN1CP49918 316 aaPredicted RBP0.65□□□□□ -2.31
SNORD28-201ENST00000384706 RASSF2P50749 326 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 DGKQP52824 942 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 POLE2P56282 527 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 TMPRSS3P57727 454 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 TUBA1BP68363 451 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 NSUN2Q08J23 767 aaKnown RBP eCLIP0.65□□□□□ -2.31
SNORD28-201ENST00000384706 PMPCAQ10713 525 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 MTAPQ13126 283 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 SEMA3BQ13214 749 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 DMP1Q13316 513 aaPredicted RBP0.65□□□□□ -2.31
SNORD28-201ENST00000384706 KCNJ12Q14500 433 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 CLCA4Q14CN2 919 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 HLFQ16534 295 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 P3H1Q32P28 736 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 C14orf177Q52M58 125 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 TDRD12Q587J7 1177 aaKnown RBP0.65□□□□□ -2.31
SNORD28-201ENST00000384706 ALG10Q5BKT4 473 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 ALG10BQ5I7T1 473 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 ENTPD8Q5MY95 495 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 STPG1Q5TH74 334 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 ASPHD1Q5U4P2 390 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 BSPRYQ5W0U4 402 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 EGFLAMQ63HQ2 1017 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 PMS2CLQ68D20 193 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 PLAG1Q6DJT9 500 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 RETSATQ6NUM9 610 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 MZT2AQ6P582 158 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 B3GNT9Q6UX72 402 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 LRIG3Q6UXM1 1119 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 KRTAP5-5Q701N2 237 aaPredicted RBP0.65□□□□□ -2.31
SNORD28-201ENST00000384706 ZNF771Q7L3S4 317 aaPredicted RBP0.65□□□□□ -2.31
SNORD28-201ENST00000384706 ZNF367Q7RTV3 350 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 DGLUCYQ7Z3D6 616 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 KRT28Q7Z3Y7 464 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 MYPOPQ86VE0 399 aaPredicted RBP0.65□□□□□ -2.31
SNORD28-201ENST00000384706 CAMK1DQ8IU85 385 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 DENND1CQ8IV53 801 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 YAF2Q8IY57 180 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 CLIP4Q8N3C7 705 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 RFLNBQ8N5W9 214 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 DDX51Q8N8A6 666 aaKnown RBP eCLIP0.65□□□□□ -2.31
SNORD28-201ENST00000384706 LMNTD1Q8N9Z9 388 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 POC1AQ8NBT0 407 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 ENGASEQ8NFI3 743 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 OR14A16Q8NHC5 309 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 IL31RAQ8NI17 732 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 PPP1R35Q8TAP8 253 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 SUN3Q8TAQ9 357 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 SPATA20Q8TB22 786 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 NEK9Q8TD19 979 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 DIS3LQ8TF46 1054 aaKnown RBP0.65□□□□□ -2.31
SNORD28-201ENST00000384706 KAT2AQ92830 837 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 PMM1Q92871 262 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 ANKRD9Q96BM1 317 aaPredicted RBP0.65□□□□□ -2.31
SNORD28-201ENST00000384706 FBXO17Q96EF6 278 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 SUCLG2Q96I99 432 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 ZNF845Q96IR2 970 aaPredicted RBP0.65□□□□□ -2.31
SNORD28-201ENST00000384706 LRGUKQ96M69 825 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 GPR78Q96P69 363 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 PGLYRP2Q96PD5 576 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 ZNF347Q96SE7 839 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 FIZ1Q96SL8 496 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 PKP4Q99569 1192 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 EIF3CQ99613 913 aaKnown RBP0.65□□□□□ -2.31
SNORD28-201ENST00000384706 WDR77Q9BQA1 342 aaPredicted RBP0.65□□□□□ -2.31
SNORD28-201ENST00000384706 ABHD14AQ9BUJ0 271 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 TRMT61BQ9BVS5 477 aaKnown RBP0.65□□□□□ -2.31
SNORD28-201ENST00000384706 C1QTNF5Q9BXJ0 243 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 RNF26Q9BY78 433 aaPredicted RBP0.65□□□□□ -2.31
SNORD28-201ENST00000384706 ASPSCR1Q9BZE9 553 aa0.65□□□□□ -2.31
SNORD28-201ENST00000384706 ZCWPW1Q9H0M4 648 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms