RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 RFX8Q6ZV50 586 aa20.07■□□□□ 0.8
SHROOM1-202ENST00000378676 DTX3LQ8TDB6 740 aa20.07■□□□□ 0.8
SHROOM1-202ENST00000378676 DNAJC9Q8WXX5 260 aa20.07■□□□□ 0.8
SHROOM1-202ENST00000378676 ZNF333Q96JL9 665 aa20.07■□□□□ 0.8
SHROOM1-202ENST00000378676 FAM161BQ96MY7 647 aa20.07■□□□□ 0.8
SHROOM1-202ENST00000378676 EIF2B3Q9NR50 452 aaKnown RBP20.07■□□□□ 0.8
SHROOM1-202ENST00000378676 GDAP2Q9NXN4 497 aa20.07■□□□□ 0.8
SHROOM1-202ENST00000378676 RCOR3Q9P2K3 495 aaPredicted RBP20.07■□□□□ 0.8
SHROOM1-202ENST00000378676 STOML1Q9UBI4 398 aa20.07■□□□□ 0.8
SHROOM1-202ENST00000378676 PLA2G4CQ9UP65 541 aa20.07■□□□□ 0.8
SHROOM1-202ENST00000378676 PRR5-ARHGAP8B1AHC4 643 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 PDHXO00330 501 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 TBX10O75333 385 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 PGAM1P18669 254 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 KCNA4P22459 653 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 NDUFV1P49821 464 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 ARHGAP8P85298 464 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 PCLAFQ15004 111 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 CMPK2Q5EBM0 449 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 TEDDM1Q5T9Z0 273 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 ZNF567Q8N184 647 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 APPL2Q8NEU8 664 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 ZNF560Q96MR9 790 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 THAP1Q9NVV9 213 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 TAGLN3Q9UI15 199 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 PIN4Q9Y237 131 aaKnown RBP20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 CAPN9O14815 690 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 CREB3O43889 395 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 PLIN3O60664 434 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 SMIM10L2AP0DMW4 78 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 SMIM10L2BP0DMW5 78 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 ACAT1P24752 427 aaKnown RBP20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 TUBB3Q13509 450 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 THOC5Q13769 683 aaKnown RBP20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 C11orf91Q3C1V1 193 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 LIMS2Q7Z4I7 341 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 ZNF467Q7Z7K2 595 aaPredicted RBP20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 PPP1R14CQ8TAE6 165 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 MICAL1Q8TDZ2 1067 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 MAML3Q96JK9 1138 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 CLPTM1LQ96KA5 538 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 RILPQ96NA2 401 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 OSBPL1AQ9BXW6 950 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 PRDM12Q9H4Q4 367 aa20.06■□□□□ 0.8
SHROOM1-202ENST00000378676 NUP205Q92621 2012 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 LIN7AO14910 233 aaPredicted RBP20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 NVLO15381 856 aaKnown RBP20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 OPHN1O60890 802 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 GLRA3O75311 464 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 F7P08709 466 aaPredicted RBP20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 CYP2C9P11712 490 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 ACADSP16219 412 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 VHLP40337 213 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 GLUD2P49448 558 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 TAF6P49848 677 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 RAP1GDS1P52306 607 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 RABGGTBP53611 331 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 MUM1Q2TAK8 710 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 SNX30Q5VWJ9 437 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 SYPL2Q5VXT5 272 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 HFE2Q6ZVN8 426 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 TMPRSS6Q8IU80 811 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 HACE1Q8IYU2 909 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 RNF169Q8NCN4 708 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 B3GALNT2Q8NCR0 500 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 CCNYQ8ND76 341 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 PGBD4Q96DM1 585 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 DNAJC16Q9Y2G8 782 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 WASF2Q9Y6W5 498 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 CD4P01730 458 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 ITGA2BP08514 1039 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 TSNAXIP1Q2TAA8 658 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 PPM1JQ5JR12 505 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 USP50Q70EL3 339 aaPredicted RBP20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 BNIPLQ7Z465 357 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 RASSF3Q86WH2 238 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 ACMSDQ8TDX5 336 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 NPY6RQ99463 290 aa20.05■□□□□ 0.8
SHROOM1-202ENST00000378676 E2F8A0AVK6 867 aa20.04■□□□□ 0.8
SHROOM1-202ENST00000378676 RRN3P2A6NIE6 340 aa20.04■□□□□ 0.8
SHROOM1-202ENST00000378676 MEI4A8MW99 385 aa20.04■□□□□ 0.8
SHROOM1-202ENST00000378676 MAGEC1O60732 1142 aa20.04■□□□□ 0.8
SHROOM1-202ENST00000378676 PDHA1P08559 390 aa20.04■□□□□ 0.8
SHROOM1-202ENST00000378676 ERVK-10P10266 1014 aa20.04■□□□□ 0.8
SHROOM1-202ENST00000378676 IGFBP6P24592 240 aaPredicted RBP20.04■□□□□ 0.8
SHROOM1-202ENST00000378676 ARRB2P32121 409 aa20.04■□□□□ 0.8
SHROOM1-202ENST00000378676 GCKP35557 465 aa20.04■□□□□ 0.8
SHROOM1-202ENST00000378676 MLH1P40692 756 aa20.04■□□□□ 0.8
SHROOM1-202ENST00000378676 NME3Q13232 169 aa20.04■□□□□ 0.8
SHROOM1-202ENST00000378676 UBXN11Q5T124 520 aa20.04■□□□□ 0.8
SHROOM1-202ENST00000378676 PAQR9Q6ZVX9 377 aa20.04■□□□□ 0.8
SHROOM1-202ENST00000378676 DPP9Q86TI2 863 aa20.04■□□□□ 0.8
SHROOM1-202ENST00000378676 NME8Q8N427 588 aa20.04■□□□□ 0.8
SHROOM1-202ENST00000378676 ARRDC4Q8NCT1 418 aa20.04■□□□□ 0.8
SHROOM1-202ENST00000378676 CDKL2Q92772 493 aa20.04■□□□□ 0.8
SHROOM1-202ENST00000378676 GORASP1Q9BQQ3 440 aa20.04■□□□□ 0.8
SHROOM1-202ENST00000378676 PIGVQ9NUD9 493 aa20.04■□□□□ 0.8
SHROOM1-202ENST00000378676 SPECC1L-ADORA2AF8WAN1 911 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 M0QYT0 321 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 STK10O94804 968 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms