RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 PRICKLE1Q96MT3 831 aaPredicted RBP23■■□□□ 1.27
TRIM28-202ENST00000341753 CEP41Q9BYV8 373 aa23■■□□□ 1.27
TRIM28-202ENST00000341753 MFHAS1Q9Y4C4 1052 aa23■■□□□ 1.27
TRIM28-202ENST00000341753 AK5Q9Y6K8 562 aa23■■□□□ 1.27
TRIM28-202ENST00000341753 GOLGA8QA0A0J9YX86 632 aa22.99■■□□□ 1.27
TRIM28-202ENST00000341753 SMIM31A0A1B0GVY4 71 aa22.99■■□□□ 1.27
TRIM28-202ENST00000341753 BCLAF3A2AJT9 711 aaKnown RBP22.99■■□□□ 1.27
TRIM28-202ENST00000341753 GOLGA8OA6NCC3 632 aa22.99■■□□□ 1.27
TRIM28-202ENST00000341753 GOLGA8NF8WBI6 632 aa22.99■■□□□ 1.27
TRIM28-202ENST00000341753 PIM1P11309 404 aaPredicted RBP22.99■■□□□ 1.27
TRIM28-202ENST00000341753 TFE3P19532 575 aaPredicted RBP22.99■■□□□ 1.27
TRIM28-202ENST00000341753 CYP3A5P20815 502 aa22.99■■□□□ 1.27
TRIM28-202ENST00000341753 SLC9B1Q4ZJI4 515 aa22.99■■□□□ 1.27
TRIM28-202ENST00000341753 IYDQ6PHW0 289 aa22.99■■□□□ 1.27
TRIM28-202ENST00000341753 CMC1Q7Z7K0 106 aa22.99■■□□□ 1.27
TRIM28-202ENST00000341753 RNF148Q8N7C7 305 aa22.99■■□□□ 1.27
TRIM28-202ENST00000341753 TMEM176AQ96HP8 235 aa22.99■■□□□ 1.27
TRIM28-202ENST00000341753 ELP3Q9H9T3 547 aa22.99■■□□□ 1.27
TRIM28-202ENST00000341753 MOCS1Q9NZB8 636 aa22.99■■□□□ 1.27
TRIM28-202ENST00000341753 HSFX1Q9UBD0 423 aa22.99■■□□□ 1.27
TRIM28-202ENST00000341753 LZTS1Q9Y250 596 aa22.99■■□□□ 1.27
TRIM28-202ENST00000341753 GLRA3O75311 464 aa22.99■■□□□ 1.27
TRIM28-202ENST00000341753 DDNO94850 711 aaPredicted RBP22.99■■□□□ 1.27
TRIM28-202ENST00000341753 CLPTM1O96005 669 aa22.99■■□□□ 1.27
TRIM28-202ENST00000341753 ITGB3P05106 788 aa22.99■■□□□ 1.27
TRIM28-202ENST00000341753 ITGA2BP08514 1039 aa22.99■■□□□ 1.27
TRIM28-202ENST00000341753 ICAM3P32942 547 aa22.99■■□□□ 1.27
TRIM28-202ENST00000341753 SCNN1BP51168 640 aa22.99■■□□□ 1.27
TRIM28-202ENST00000341753 ATXN1P54253 815 aaKnown RBP22.99■■□□□ 1.27
TRIM28-202ENST00000341753 NADK2Q4G0N4 442 aa22.99■■□□□ 1.27
TRIM28-202ENST00000341753 PPM1LQ5SGD2 360 aa22.99■■□□□ 1.27
TRIM28-202ENST00000341753 MAP1SQ66K74 1059 aaPredicted RBP22.99■■□□□ 1.27
TRIM28-202ENST00000341753 COPS5Q92905 334 aa22.99■■□□□ 1.27
TRIM28-202ENST00000341753 LRRC39Q96DD0 335 aa22.99■■□□□ 1.27
TRIM28-202ENST00000341753 PPP1R16BQ96T49 567 aa22.99■■□□□ 1.27
TRIM28-202ENST00000341753 CSDE1O75534 798 aaKnown RBP22.98■■□□□ 1.27
TRIM28-202ENST00000341753 RALBP11234 206 aa22.98■■□□□ 1.27
TRIM28-202ENST00000341753 MRPS22P82650 360 aaKnown RBP22.98■■□□□ 1.27
TRIM28-202ENST00000341753 ZNF781Q8N8C0 355 aa22.98■■□□□ 1.27
TRIM28-202ENST00000341753 MCUQ8NE86 351 aa22.98■■□□□ 1.27
TRIM28-202ENST00000341753 CHST13Q8NET6 341 aa22.98■■□□□ 1.27
TRIM28-202ENST00000341753 DNERQ8NFT8 737 aa22.98■■□□□ 1.27
TRIM28-202ENST00000341753 DGCR14Q96DF8 476 aaKnown RBP22.98■■□□□ 1.27
TRIM28-202ENST00000341753 COG4Q9H9E3 785 aa22.98■■□□□ 1.27
TRIM28-202ENST00000341753 DNAJC28Q9NX36 388 aa22.98■■□□□ 1.27
TRIM28-202ENST00000341753 DNAJA2O60884 412 aa22.98■■□□□ 1.27
TRIM28-202ENST00000341753 DGKIO75912 1065 aa22.98■■□□□ 1.27
TRIM28-202ENST00000341753 ABCG1P45844 678 aa22.98■■□□□ 1.27
TRIM28-202ENST00000341753 MTTPP55157 894 aa22.98■■□□□ 1.27
TRIM28-202ENST00000341753 ABCE1P61221 599 aaKnown RBP22.98■■□□□ 1.27
TRIM28-202ENST00000341753 ACAP1Q15027 740 aa22.98■■□□□ 1.27
TRIM28-202ENST00000341753 TARBP2Q15633 366 aaKnown RBP22.98■■□□□ 1.27
TRIM28-202ENST00000341753 CNGA3Q16281 694 aa22.98■■□□□ 1.27
TRIM28-202ENST00000341753 OGFRL1Q5TC84 451 aaPredicted RBP22.98■■□□□ 1.27
TRIM28-202ENST00000341753 KLHDC10Q6PID8 442 aa22.98■■□□□ 1.27
TRIM28-202ENST00000341753 TIFABQ6ZNK6 161 aa22.98■■□□□ 1.27
TRIM28-202ENST00000341753 PQLC1Q8N2U9 271 aa22.98■■□□□ 1.27
TRIM28-202ENST00000341753 C12orf29Q8N999 325 aa22.98■■□□□ 1.27
TRIM28-202ENST00000341753 C1orf127Q8N9H9 656 aa22.98■■□□□ 1.27
TRIM28-202ENST00000341753 PIP4K2CQ8TBX8 421 aa22.98■■□□□ 1.27
TRIM28-202ENST00000341753 MAPK15Q8TD08 544 aa22.98■■□□□ 1.27
TRIM28-202ENST00000341753 NIFKQ9BYG3 293 aaKnown RBP22.98■■□□□ 1.27
TRIM28-202ENST00000341753 SPATC1LQ9H0A9 340 aa22.98■■□□□ 1.27
TRIM28-202ENST00000341753 ARHGAP26Q9UNA1 814 aa22.98■■□□□ 1.27
TRIM28-202ENST00000341753 TGM2P21980 687 aa22.97■■□□□ 1.27
TRIM28-202ENST00000341753 XIAPP98170 497 aa22.97■■□□□ 1.27
TRIM28-202ENST00000341753 LENG1Q96BZ8 264 aaPredicted RBP22.97■■□□□ 1.27
TRIM28-202ENST00000341753 LENG8Q96PV6 779 aaPredicted RBP22.97■■□□□ 1.27
TRIM28-202ENST00000341753 SIKE1Q9BRV8 207 aa22.97■■□□□ 1.27
TRIM28-202ENST00000341753 CENPFP49454 3210 aa22.97■■□□□ 1.27
TRIM28-202ENST00000341753 IGKV6D-21A0A0A0MT36 114 aa22.97■■□□□ 1.27
TRIM28-202ENST00000341753 CASQ2O14958 399 aaPredicted RBP22.97■■□□□ 1.27
TRIM28-202ENST00000341753 CYP2F1P24903 491 aa22.97■■□□□ 1.27
TRIM28-202ENST00000341753 MAGEA6P43360 314 aa22.97■■□□□ 1.27
TRIM28-202ENST00000341753 NUDT2P50583 147 aa22.97■■□□□ 1.27
TRIM28-202ENST00000341753 LAMTOR4Q0VGL1 99 aa22.97■■□□□ 1.27
TRIM28-202ENST00000341753 KLF10Q13118 480 aa22.97■■□□□ 1.27
TRIM28-202ENST00000341753 GRM1Q13255 1194 aa22.97■■□□□ 1.27
TRIM28-202ENST00000341753 ADAM32Q8TC27 787 aa22.97■■□□□ 1.27
TRIM28-202ENST00000341753 BCO2Q9BYV7 579 aa22.97■■□□□ 1.27
TRIM28-202ENST00000341753 RHBDL2Q9NX52 303 aa22.97■■□□□ 1.27
TRIM28-202ENST00000341753 COPG2Q9UBF2 871 aa22.97■■□□□ 1.27
TRIM28-202ENST00000341753 NEMP1O14524 444 aa22.96■■□□□ 1.27
TRIM28-202ENST00000341753 CRTAMO95727 393 aa22.96■■□□□ 1.27
TRIM28-202ENST00000341753 MGAT1P26572 445 aa22.96■■□□□ 1.27
TRIM28-202ENST00000341753 GTF2A2P52657 109 aa22.96■■□□□ 1.27
TRIM28-202ENST00000341753 SLC9A4Q6AI14 798 aa22.96■■□□□ 1.27
TRIM28-202ENST00000341753 KCNT2Q6UVM3 1135 aa22.96■■□□□ 1.27
TRIM28-202ENST00000341753 GALNT4Q8N4A0 578 aa22.96■■□□□ 1.27
TRIM28-202ENST00000341753 ATP2A3Q93084 1043 aa22.96■■□□□ 1.27
TRIM28-202ENST00000341753 PHF12Q96QT6 1004 aa22.96■■□□□ 1.27
TRIM28-202ENST00000341753 OR52B2Q96RD2 323 aa22.96■■□□□ 1.27
TRIM28-202ENST00000341753 TXNRD2Q9NNW7 524 aa22.96■■□□□ 1.27
TRIM28-202ENST00000341753 CILPO75339 1184 aa22.96■■□□□ 1.27
TRIM28-202ENST00000341753 ERVK-10P10266 1014 aa22.96■■□□□ 1.27
TRIM28-202ENST00000341753 TYK2P29597 1187 aa22.96■■□□□ 1.27
TRIM28-202ENST00000341753 STILQ15468 1287 aa22.96■■□□□ 1.27
TRIM28-202ENST00000341753 NAPRTQ6XQN6 538 aa22.96■■□□□ 1.27
TRIM28-202ENST00000341753 LCA5Q86VQ0 697 aa22.96■■□□□ 1.27
TRIM28-202ENST00000341753 NLRP4Q96MN2 994 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms