RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 H3BRJ5 948 aa25.73■■□□□ 1.71
CDPF1-201ENST00000314567 H7C0C1 242 aa25.73■■□□□ 1.71
CDPF1-201ENST00000314567 RFPL2O75678 378 aa25.73■■□□□ 1.71
CDPF1-201ENST00000314567 ATP5OP48047 213 aa25.73■■□□□ 1.71
CDPF1-201ENST00000314567 GYS2P54840 703 aa25.73■■□□□ 1.71
CDPF1-201ENST00000314567 NME3Q13232 169 aa25.73■■□□□ 1.71
CDPF1-201ENST00000314567 XRCC4Q13426 336 aa25.73■■□□□ 1.71
CDPF1-201ENST00000314567 SLC29A2Q14542 456 aa25.73■■□□□ 1.71
CDPF1-201ENST00000314567 AGBL2Q5U5Z8 902 aa25.73■■□□□ 1.71
CDPF1-201ENST00000314567 BTBD8Q5XKL5 378 aa25.73■■□□□ 1.71
CDPF1-201ENST00000314567 DNAJB7Q7Z6W7 309 aaPredicted RBP25.73■■□□□ 1.71
CDPF1-201ENST00000314567 UNC45BQ8IWX7 931 aa25.73■■□□□ 1.71
CDPF1-201ENST00000314567 TMEM109Q9BVC6 243 aa25.73■■□□□ 1.71
CDPF1-201ENST00000314567 PHACTR1Q9C0D0 580 aa25.73■■□□□ 1.71
CDPF1-201ENST00000314567 MAN1C1Q9NR34 630 aa25.73■■□□□ 1.71
CDPF1-201ENST00000314567 BCLAF3A2AJT9 711 aaKnown RBP25.72■■□□□ 1.71
CDPF1-201ENST00000314567 TBX18O95935 607 aa25.72■■□□□ 1.71
CDPF1-201ENST00000314567 SMAD3P84022 425 aaKnown RBP25.72■■□□□ 1.71
CDPF1-201ENST00000314567 CDKL3Q8IVW4 592 aaPredicted RBP25.72■■□□□ 1.71
CDPF1-201ENST00000314567 RTP4Q96DX8 246 aa25.72■■□□□ 1.71
CDPF1-201ENST00000314567 TTLL2Q9BWV7 592 aa25.72■■□□□ 1.71
CDPF1-201ENST00000314567 ZNF334Q9HCZ1 680 aaPredicted RBP25.72■■□□□ 1.71
CDPF1-201ENST00000314567 CWC15Q9P013 229 aaKnown RBP25.72■■□□□ 1.71
CDPF1-201ENST00000314567 SFMBT1Q9UHJ3 866 aa25.72■■□□□ 1.71
CDPF1-201ENST00000314567 FARP1Q9Y4F1 1045 aaPredicted RBP25.72■■□□□ 1.71
CDPF1-201ENST00000314567 HEY1Q9Y5J3 304 aa25.72■■□□□ 1.71
CDPF1-201ENST00000314567 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP25.72■■□□□ 1.71
CDPF1-201ENST00000314567 RPL22P35268 128 aaKnown RBP25.72■■□□□ 1.71
CDPF1-201ENST00000314567 MLLT1Q03111 559 aaPredicted RBP25.72■■□□□ 1.71
CDPF1-201ENST00000314567 KRT71Q3SY84 523 aa25.72■■□□□ 1.71
CDPF1-201ENST00000314567 BZW1Q7L1Q6 419 aaKnown RBP25.72■■□□□ 1.71
CDPF1-201ENST00000314567 ZC3H18Q86VM9 953 aaKnown RBP25.72■■□□□ 1.71
CDPF1-201ENST00000314567 MON1AQ86VX9 555 aa25.72■■□□□ 1.71
CDPF1-201ENST00000314567 PPIL6Q8IXY8 311 aa25.72■■□□□ 1.71
CDPF1-201ENST00000314567 MAGEB5Q9BZ81 275 aa25.72■■□□□ 1.71
CDPF1-201ENST00000314567 WDR6Q9NNW5 1121 aaKnown RBP25.72■■□□□ 1.71
CDPF1-201ENST00000314567 TMPRSS4Q9NRS4 437 aa25.72■■□□□ 1.71
CDPF1-201ENST00000314567 CCL16O15467 120 aa25.71■■□□□ 1.71
CDPF1-201ENST00000314567 CSH1P0DML2 217 aa25.71■■□□□ 1.71
CDPF1-201ENST00000314567 CSH2P0DML3 217 aa25.71■■□□□ 1.71
CDPF1-201ENST00000314567 ZNF135P52742 658 aaPredicted RBP25.71■■□□□ 1.71
CDPF1-201ENST00000314567 EPHB3P54753 998 aa25.71■■□□□ 1.71
CDPF1-201ENST00000314567 TAF12Q16514 161 aa25.71■■□□□ 1.71
CDPF1-201ENST00000314567 ARL13BQ3SXY8 428 aa25.71■■□□□ 1.71
CDPF1-201ENST00000314567 ZNF697Q5TEC3 545 aa25.71■■□□□ 1.71
CDPF1-201ENST00000314567 TAC4Q86UU9 113 aa25.71■■□□□ 1.71
CDPF1-201ENST00000314567 FAM71DQ8N9W8 422 aa25.71■■□□□ 1.71
CDPF1-201ENST00000314567 COLQQ9Y215 455 aaPredicted RBP25.71■■□□□ 1.71
CDPF1-201ENST00000314567 NRG2O14511 850 aaPredicted RBP25.7■■□□□ 1.71
CDPF1-201ENST00000314567 MSI1O43347 362 aaKnown RBP25.7■■□□□ 1.71
CDPF1-201ENST00000314567 TTC4O95801 387 aa25.7■■□□□ 1.71
CDPF1-201ENST00000314567 ADRA1BP35368 520 aa25.7■■□□□ 1.71
CDPF1-201ENST00000314567 ACTN2P35609 894 aa25.7■■□□□ 1.71
CDPF1-201ENST00000314567 NRIP1P48552 1158 aa25.7■■□□□ 1.71
CDPF1-201ENST00000314567 VEPH1Q14D04 833 aa25.7■■□□□ 1.71
CDPF1-201ENST00000314567 HS6ST3Q8IZP7 471 aa25.7■■□□□ 1.71
CDPF1-201ENST00000314567 DQX1Q8TE96 717 aaKnown RBP25.7■■□□□ 1.71
CDPF1-201ENST00000314567 RNF139Q8WU17 664 aa25.7■■□□□ 1.71
CDPF1-201ENST00000314567 PRCCQ92733 491 aaPredicted RBP25.7■■□□□ 1.71
CDPF1-201ENST00000314567 CASP10Q92851 521 aa25.7■■□□□ 1.71
CDPF1-201ENST00000314567 ZNF512Q96ME7 567 aaPredicted RBP25.7■■□□□ 1.71
CDPF1-201ENST00000314567 C10orf88Q9H8K7 445 aa25.7■■□□□ 1.71
CDPF1-201ENST00000314567 ABCC13Q9NSE7 274 aa25.7■■□□□ 1.71
CDPF1-201ENST00000314567 DDIT4Q9NX09 232 aa25.7■■□□□ 1.71
CDPF1-201ENST00000314567 HCFC2Q9Y5Z7 792 aa25.7■■□□□ 1.71
CDPF1-201ENST00000314567 LRG1P02750 347 aa25.7■■□□□ 1.7
CDPF1-201ENST00000314567 GOT1P17174 413 aa25.7■■□□□ 1.7
CDPF1-201ENST00000314567 NCBP2-AS2Q69YL0 99 aa25.7■■□□□ 1.7
CDPF1-201ENST00000314567 C4orf22Q6V702 233 aa25.7■■□□□ 1.7
CDPF1-201ENST00000314567 PSMG2Q969U7 264 aa25.7■■□□□ 1.7
CDPF1-201ENST00000314567 RBM15Q96T37 977 aaKnown RBP eCLIP25.7■■□□□ 1.7
CDPF1-201ENST00000314567 CCSER2Q9H7U1 834 aa25.7■■□□□ 1.7
CDPF1-201ENST00000314567 PAK5Q9P286 719 aa25.7■■□□□ 1.7
CDPF1-201ENST00000314567 MAFFQ9ULX9 164 aa25.7■■□□□ 1.7
CDPF1-201ENST00000314567 PDE12Q6L8Q7 609 aaKnown RBP25.69■■□□□ 1.7
CDPF1-201ENST00000314567 CCDC149Q6ZUS6 474 aa25.69■■□□□ 1.7
CDPF1-201ENST00000314567 PYROXD2Q8N2H3 581 aa25.69■■□□□ 1.7
CDPF1-201ENST00000314567 ROPN1BQ9BZX4 212 aaPredicted RBP25.69■■□□□ 1.7
CDPF1-201ENST00000314567 TLE6Q9H808 572 aa25.69■■□□□ 1.7
CDPF1-201ENST00000314567 ROPN1Q9HAT0 212 aaPredicted RBP25.69■■□□□ 1.7
CDPF1-201ENST00000314567 USP29Q9HBJ7 922 aa25.69■■□□□ 1.7
CDPF1-201ENST00000314567 ARHGEF4Q9NR80 690 aa25.69■■□□□ 1.7
CDPF1-201ENST00000314567 TLR8Q9NR97 1041 aaKnown RBP25.69■■□□□ 1.7
CDPF1-201ENST00000314567 TMEM51Q9NW97 253 aa25.69■■□□□ 1.7
CDPF1-201ENST00000314567 HCFC1R1Q9NWW0 138 aa25.69■■□□□ 1.7
CDPF1-201ENST00000314567 SHBGP04278 402 aa25.68■■□□□ 1.7
CDPF1-201ENST00000314567 CXCR3P49682 368 aa25.68■■□□□ 1.7
CDPF1-201ENST00000314567 PPM1LQ5SGD2 360 aa25.68■■□□□ 1.7
CDPF1-201ENST00000314567 KCTD16Q68DU8 428 aa25.68■■□□□ 1.7
CDPF1-201ENST00000314567 TMEM150AQ86TG1 271 aa25.68■■□□□ 1.7
CDPF1-201ENST00000314567 CPT1BQ92523 772 aa25.68■■□□□ 1.7
CDPF1-201ENST00000314567 TTC25Q96NG3 672 aa25.68■■□□□ 1.7
CDPF1-201ENST00000314567 ANLNQ9NQW6 1124 aa25.68■■□□□ 1.7
CDPF1-201ENST00000314567 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.68■■□□□ 1.7
CDPF1-201ENST00000314567 NINJ2Q9NZG7 142 aa25.68■■□□□ 1.7
CDPF1-201ENST00000314567 HACD1B0YJ81 288 aa25.68■■□□□ 1.7
CDPF1-201ENST00000314567 ZDHHC11BP0C7U3 371 aa25.68■■□□□ 1.7
CDPF1-201ENST00000314567 SLC45A4Q5BKX6 768 aa25.68■■□□□ 1.7
CDPF1-201ENST00000314567 EMC10Q5UCC4 262 aa25.68■■□□□ 1.7
CDPF1-201ENST00000314567 NAT8LQ8N9F0 302 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms