RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 MFHAS1Q9Y4C4 1052 aa25.42■■□□□ 1.66
GTF2A1-201ENST00000298173 FAM187AA6NFU0 413 aa25.42■■□□□ 1.66
GTF2A1-201ENST00000298173 KLKB1P03952 638 aa25.42■■□□□ 1.66
GTF2A1-201ENST00000298173 ITGAVP06756 1048 aa25.42■■□□□ 1.66
GTF2A1-201ENST00000298173 MBL2P11226 248 aaPredicted RBP25.42■■□□□ 1.66
GTF2A1-201ENST00000298173 GJA1P17302 382 aa25.42■■□□□ 1.66
GTF2A1-201ENST00000298173 EPHB2P29323 1055 aa25.42■■□□□ 1.66
GTF2A1-201ENST00000298173 SLC7A9P82251 487 aa25.42■■□□□ 1.66
GTF2A1-201ENST00000298173 GBE1Q04446 702 aa25.42■■□□□ 1.66
GTF2A1-201ENST00000298173 AUHQ13825 339 aaKnown RBP25.42■■□□□ 1.66
GTF2A1-201ENST00000298173 LRIT3Q3SXY7 679 aa25.42■■□□□ 1.66
GTF2A1-201ENST00000298173 NADSYN1Q6IA69 706 aa25.42■■□□□ 1.66
GTF2A1-201ENST00000298173 MAB21L3Q8N8X9 362 aa25.42■■□□□ 1.66
GTF2A1-201ENST00000298173 ADAMTS19Q8TE59 1207 aa25.42■■□□□ 1.66
GTF2A1-201ENST00000298173 SLC46A2Q9BY10 475 aa25.42■■□□□ 1.66
GTF2A1-201ENST00000298173 ZNF576Q9H609 170 aa25.42■■□□□ 1.66
GTF2A1-201ENST00000298173 RAB21Q9UL25 225 aa25.42■■□□□ 1.66
GTF2A1-201ENST00000298173 IGLV3-10A0A075B6K4 115 aa25.41■■□□□ 1.66
GTF2A1-201ENST00000298173 SOBPA7XYQ1 873 aa25.41■■□□□ 1.66
GTF2A1-201ENST00000298173 E9PAM4 449 aa25.41■■□□□ 1.66
GTF2A1-201ENST00000298173 DAPK3O43293 454 aa25.41■■□□□ 1.66
GTF2A1-201ENST00000298173 SRGAP2BP0DMP2 458 aa25.41■■□□□ 1.66
GTF2A1-201ENST00000298173 HARS2P49590 506 aaKnown RBP25.41■■□□□ 1.66
GTF2A1-201ENST00000298173 PRSS36Q5K4E3 855 aa25.41■■□□□ 1.66
GTF2A1-201ENST00000298173 WDR93Q6P2C0 686 aa25.41■■□□□ 1.66
GTF2A1-201ENST00000298173 TMEM184AQ6ZMB5 413 aa25.41■■□□□ 1.66
GTF2A1-201ENST00000298173 PDZD4Q76G19 769 aaPredicted RBP25.41■■□□□ 1.66
GTF2A1-201ENST00000298173 JAMLQ86YT9 394 aa25.41■■□□□ 1.66
GTF2A1-201ENST00000298173 SEC14L1Q92503 715 aa25.41■■□□□ 1.66
GTF2A1-201ENST00000298173 TCEAL4Q96EI5 215 aa25.41■■□□□ 1.66
GTF2A1-201ENST00000298173 GCNAQ96QF7 691 aa25.41■■□□□ 1.66
GTF2A1-201ENST00000298173 DTLQ9NZJ0 730 aa25.41■■□□□ 1.66
GTF2A1-201ENST00000298173 HEY1Q9Y5J3 304 aa25.41■■□□□ 1.66
GTF2A1-201ENST00000298173 NUP205Q92621 2012 aa25.4■■□□□ 1.66
GTF2A1-201ENST00000298173 ACSL4O60488 711 aa25.4■■□□□ 1.66
GTF2A1-201ENST00000298173 GREM1O60565 184 aa25.4■■□□□ 1.66
GTF2A1-201ENST00000298173 HEXIM1O94992 359 aaKnown RBP25.4■■□□□ 1.66
GTF2A1-201ENST00000298173 EIF3EP60228 445 aaKnown RBP25.4■■□□□ 1.66
GTF2A1-201ENST00000298173 SLC5A9Q2M3M2 681 aa25.4■■□□□ 1.66
GTF2A1-201ENST00000298173 STXBP5Q5T5C0 1151 aa25.4■■□□□ 1.66
GTF2A1-201ENST00000298173 GRK7Q8WTQ7 553 aa25.4■■□□□ 1.66
GTF2A1-201ENST00000298173 WBP2Q969T9 261 aa25.4■■□□□ 1.66
GTF2A1-201ENST00000298173 TBC1D31Q96DN5 1066 aa25.4■■□□□ 1.66
GTF2A1-201ENST00000298173 GDF3Q9NR23 364 aa25.4■■□□□ 1.66
GTF2A1-201ENST00000298173 PPARGC1AQ9UBK2 798 aaKnown RBP25.4■■□□□ 1.66
GTF2A1-201ENST00000298173 DRGXA6NNA5 263 aa25.39■■□□□ 1.66
GTF2A1-201ENST00000298173 RBP3P10745 1247 aa25.39■■□□□ 1.66
GTF2A1-201ENST00000298173 DDX6P26196 483 aaKnown RBP eCLIP25.39■■□□□ 1.665e-6■■■■■ 46.6
GTF2A1-201ENST00000298173 LMNB2Q03252 620 aa25.39■■□□□ 1.66
GTF2A1-201ENST00000298173 KCTD19Q17RG1 926 aaPredicted RBP25.39■■□□□ 1.66
GTF2A1-201ENST00000298173 C5orf22Q49AR2 442 aa25.39■■□□□ 1.66
GTF2A1-201ENST00000298173 GRASPQ7Z6J2 395 aaPredicted RBP25.39■■□□□ 1.66
GTF2A1-201ENST00000298173 RUBCNQ92622 972 aa25.39■■□□□ 1.66
GTF2A1-201ENST00000298173 PPP2R3CQ969Q6 453 aa25.39■■□□□ 1.66
GTF2A1-201ENST00000298173 OLFM3Q96PB7 478 aa25.39■■□□□ 1.66
GTF2A1-201ENST00000298173 HINFPQ9BQA5 517 aa25.39■■□□□ 1.66
GTF2A1-201ENST00000298173 NSUN3Q9H649 340 aaKnown RBP25.39■■□□□ 1.66
GTF2A1-201ENST00000298173 STOML2Q9UJZ1 356 aa25.39■■□□□ 1.66
GTF2A1-201ENST00000298173 ZSCAN5CA6NGD5 496 aaPredicted RBP25.39■■□□□ 1.65
GTF2A1-201ENST00000298173 WASH4PA8MWX3 477 aa25.39■■□□□ 1.65
GTF2A1-201ENST00000298173 FGF10O15520 208 aaPredicted RBP25.39■■□□□ 1.65
GTF2A1-201ENST00000298173 ECEL1O95672 775 aa25.39■■□□□ 1.65
GTF2A1-201ENST00000298173 TUBBP07437 444 aa25.39■■□□□ 1.65
GTF2A1-201ENST00000298173 XRCC4Q13426 336 aa25.39■■□□□ 1.65
GTF2A1-201ENST00000298173 FAM133BQ5BKY9 247 aaKnown RBP25.39■■□□□ 1.65
GTF2A1-201ENST00000298173 FBXL22Q6P050 247 aa25.39■■□□□ 1.65
GTF2A1-201ENST00000298173 TMCO3Q6UWJ1 677 aa25.39■■□□□ 1.65
GTF2A1-201ENST00000298173 ALLCQ8N6M5 410 aa25.39■■□□□ 1.65
GTF2A1-201ENST00000298173 C12orf76Q8N812 135 aaPredicted RBP25.39■■□□□ 1.65
GTF2A1-201ENST00000298173 ERP44Q9BS26 406 aa25.39■■□□□ 1.65
GTF2A1-201ENST00000298173 KLC2Q9H0B6 622 aa25.39■■□□□ 1.65
GTF2A1-201ENST00000298173 VANGL2Q9ULK5 521 aa25.39■■□□□ 1.65
GTF2A1-201ENST00000298173 ZNF148Q9UQR1 794 aa25.39■■□□□ 1.65
GTF2A1-201ENST00000298173 CPQQ9Y646 472 aa25.39■■□□□ 1.65
GTF2A1-201ENST00000298173 CLUHO75153 1309 aa25.38■■□□□ 1.65
GTF2A1-201ENST00000298173 TRAV19A0A0A6YYK7 116 aa25.38■■□□□ 1.65
GTF2A1-201ENST00000298173 GOLGA6L7A0A1B0GV03 622 aa25.38■■□□□ 1.65
GTF2A1-201ENST00000298173 A0A1W2PPC1 479 aa25.38■■□□□ 1.65
GTF2A1-201ENST00000298173 MCF2LO15068 1137 aa25.38■■□□□ 1.65
GTF2A1-201ENST00000298173 CORO1AP31146 461 aaKnown RBP25.38■■□□□ 1.65
GTF2A1-201ENST00000298173 NTHL1P78549 312 aa25.38■■□□□ 1.65
GTF2A1-201ENST00000298173 HYAL1Q12794 435 aa25.38■■□□□ 1.65
GTF2A1-201ENST00000298173 RAP1GAP2Q684P5 730 aa25.38■■□□□ 1.65
GTF2A1-201ENST00000298173 SYDE1Q6ZW31 735 aaPredicted RBP25.38■■□□□ 1.65
GTF2A1-201ENST00000298173 DENND1CQ8IV53 801 aa25.38■■□□□ 1.65
GTF2A1-201ENST00000298173 TRIM51Q9BSJ1 452 aa25.38■■□□□ 1.65
GTF2A1-201ENST00000298173 TMEM121Q9BTD3 319 aa25.38■■□□□ 1.65
GTF2A1-201ENST00000298173 TASP1Q9H6P5 420 aa25.38■■□□□ 1.65
GTF2A1-201ENST00000298173 CATSPERBQ9H7T0 1116 aa25.38■■□□□ 1.65
GTF2A1-201ENST00000298173 SFXN1Q9H9B4 322 aa25.38■■□□□ 1.65
GTF2A1-201ENST00000298173 SMPD4Q9NXE4 827 aa25.38■■□□□ 1.65
GTF2A1-201ENST00000298173 AGO1Q9UL18 857 aaKnown RBP25.38■■□□□ 1.65
GTF2A1-201ENST00000298173 MFSD11O43934 449 aa25.37■■□□□ 1.65
GTF2A1-201ENST00000298173 GLP2RO95838 553 aa25.37■■□□□ 1.65
GTF2A1-201ENST00000298173 SLC11A2P49281 568 aa25.37■■□□□ 1.65
GTF2A1-201ENST00000298173 GUCY2DQ02846 1103 aa25.37■■□□□ 1.65
GTF2A1-201ENST00000298173 TEAD2Q15562 447 aa25.37■■□□□ 1.65
GTF2A1-201ENST00000298173 DUPD1Q68J44 220 aa25.37■■□□□ 1.65
GTF2A1-201ENST00000298173 RWDD4Q6NW29 188 aaKnown RBP25.37■■□□□ 1.65
GTF2A1-201ENST00000298173 LRRC31Q6UY01 552 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms