RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 TRIM9Q9C026 710 aa5.86□□□□□ -1.47
RFX4-201ENST00000229387 PLEKHA5Q9HAU0 1116 aa5.86□□□□□ -1.47
RFX4-201ENST00000229387 AVENQ9NQS1 362 aaPredicted RBP5.86□□□□□ -1.47
RFX4-201ENST00000229387 KBTBD4Q9NVX7 518 aa5.86□□□□□ -1.47
RFX4-201ENST00000229387 PCDHA1Q9Y5I3 950 aa5.86□□□□□ -1.47
RFX4-201ENST00000229387 CPQQ9Y646 472 aa5.86□□□□□ -1.47
RFX4-201ENST00000229387 PLCH1Q4KWH8 1693 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 EMSYQ7Z589 1322 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 A0A1W2PRQ8 180 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 POTEB3A0JP26 581 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 PRSS47A8MTI9 375 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 LACTBL1A8MY62 500 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 GYG2O15488 501 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 EDIL3O43854 480 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 KLRC4O43908 158 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 CBX6O95503 412 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 GRIK1P39086 918 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 GHRHRQ02643 423 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 TARDBPQ13148 414 aaKnown RBP eCLIP5.85□□□□□ -1.47
RFX4-201ENST00000229387 SEMA3AQ14563 771 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 SLC15A2Q16348 729 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 TAF1BQ53T94 588 aaPredicted RBP5.85□□□□□ -1.47
RFX4-201ENST00000229387 PRR16Q569H4 304 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 HABP4Q5JVS0 413 aaKnown RBP5.85□□□□□ -1.47
RFX4-201ENST00000229387 POTEBQ6S5H4 581 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 VSTM1Q6UX27 236 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 KIAA0907Q7Z7F0 614 aaPredicted RBP5.85□□□□□ -1.47
RFX4-201ENST00000229387 CCDC25Q86WR0 208 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 KIAA2013Q8IYS2 634 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 ASCC1Q8N9N2 400 aaKnown RBP5.85□□□□□ -1.47
RFX4-201ENST00000229387 ZNF507Q8TCN5 953 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 C10orf82Q8WW14 230 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 SH3KBP1Q96B97 665 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 HDAC11Q96DB2 347 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 NSL1Q96IY1 281 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 SLC29A1Q99808 456 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 TRIM56Q9BRZ2 755 aaKnown RBP5.85□□□□□ -1.47
RFX4-201ENST00000229387 TUBGCP2Q9BSJ2 902 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 NOC4LQ9BVI4 516 aaKnown RBP5.85□□□□□ -1.47
RFX4-201ENST00000229387 TARS2Q9BW92 718 aaKnown RBP5.85□□□□□ -1.47
RFX4-201ENST00000229387 UCK1Q9HA47 277 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 CASS4Q9NQ75 786 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 RIC8BQ9NVN3 520 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 ASNSD1Q9NWL6 643 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 PAQR5Q9NXK6 330 aaPredicted RBP5.85□□□□□ -1.47
RFX4-201ENST00000229387 GPRC5BQ9NZH0 403 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 ZFP69BQ9UJL9 534 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 LRP5O75197 1615 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 M0R2N6 131 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 DDX39AO00148 427 aaKnown RBP5.85□□□□□ -1.47
RFX4-201ENST00000229387 ZNF263O14978 683 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 KPNA5O15131 536 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 MTSS1O43312 755 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 MSI1O43347 362 aaKnown RBP5.85□□□□□ -1.47
RFX4-201ENST00000229387 BUB1O43683 1085 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 UGT1A9O60656 530 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 BMP10O95393 424 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 TTLL1O95922 423 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 BMP15O95972 392 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 GH2P01242 217 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 IFNA14P01570 189 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 CD4P01730 458 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 C6orf222P0C671 652 aaPredicted RBP5.85□□□□□ -1.47
RFX4-201ENST00000229387 CCDC130P13994 396 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 HSPA6P17066 643 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 ATF7P17544 494 aaPredicted RBP5.85□□□□□ -1.47
RFX4-201ENST00000229387 UGT1A6P19224 532 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 UGT1A1P22309 533 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 UGT1A4P22310 534 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 UGT1A3P35503 534 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 UGT1A5P35504 534 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 MTHFRP42898 656 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 DRG2P55039 364 aaKnown RBP5.85□□□□□ -1.47
RFX4-201ENST00000229387 VBP1P61758 197 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 KRT17Q04695 432 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 POU5F1BQ06416 359 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 STRN3Q13033 797 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 AUHQ13825 339 aaKnown RBP5.85□□□□□ -1.47
RFX4-201ENST00000229387 RAB33AQ14088 237 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 SIM2Q14190 667 aaPredicted RBP5.85□□□□□ -1.47
RFX4-201ENST00000229387 SELPLGQ14242 412 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 RRP1BQ14684 758 aaKnown RBP5.85□□□□□ -1.47
RFX4-201ENST00000229387 ACAP2Q15057 778 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 ALFQ53S48 1182 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 EPM2AIP1Q7L775 607 aaPredicted RBP5.85□□□□□ -1.47
RFX4-201ENST00000229387 CLNKQ7Z7G1 428 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 TMEM126BQ8IUX1 230 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 KSR1Q8IVT5 923 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 PM20D2Q8IYS1 436 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 FAM109AQ8N4B1 249 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 CCNYL1Q8N7R7 359 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 MB21D1Q8N884 522 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 SLC4A11Q8NBS3 891 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 KIAA0895Q8NCT3 520 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 RFWD2Q8NHY2 731 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 ZNF420Q8TAQ5 688 aaPredicted RBP5.85□□□□□ -1.47
RFX4-201ENST00000229387 SLC44A1Q8WWI5 657 aa5.85□□□□□ -1.47
RFX4-201ENST00000229387 PRMT6Q96LA8 375 aaPredicted RBP5.85□□□□□ -1.47
RFX4-201ENST00000229387 CNOT6LQ96LI5 555 aaKnown RBP5.85□□□□□ -1.47
RFX4-201ENST00000229387 NACC1Q96RE7 527 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms