RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 GBP1P32455 592 aa18.38■□□□□ 0.53
PTPN11-207ENST00000639857 COPB1P53618 953 aaKnown RBP18.38■□□□□ 0.53
PTPN11-207ENST00000639857 CDK17Q00537 523 aa18.38■□□□□ 0.53
PTPN11-207ENST00000639857 TYRO3Q06418 890 aa18.38■□□□□ 0.53
PTPN11-207ENST00000639857 PUM1Q14671 1186 aaKnown RBP eCLIP18.38■□□□□ 0.53
PTPN11-207ENST00000639857 STARD3Q14849 445 aa18.38■□□□□ 0.53
PTPN11-207ENST00000639857 PTPN20Q4JDL3 420 aa18.38■□□□□ 0.53
PTPN11-207ENST00000639857 DCAF6Q58WW2 860 aa18.38■□□□□ 0.53
PTPN11-207ENST00000639857 NADSYN1Q6IA69 706 aa18.38■□□□□ 0.53
PTPN11-207ENST00000639857 PRR23CQ6ZRP0 262 aa18.38■□□□□ 0.53
PTPN11-207ENST00000639857 MSANTD4Q8NCY6 345 aa18.38■□□□□ 0.53
PTPN11-207ENST00000639857 DDX1Q92499 740 aaKnown RBP18.38■□□□□ 0.53
PTPN11-207ENST00000639857 BTN2A3PQ96KV6 586 aa18.38■□□□□ 0.53
PTPN11-207ENST00000639857 BPIFA3Q9BQP9 254 aa18.38■□□□□ 0.53
PTPN11-207ENST00000639857 PDCL3Q9H2J4 239 aa18.38■□□□□ 0.53
PTPN11-207ENST00000639857 SYNCQ9H7C4 482 aa18.38■□□□□ 0.53
PTPN11-207ENST00000639857 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.38■□□□□ 0.53
PTPN11-207ENST00000639857 DLL3Q9NYJ7 618 aa18.38■□□□□ 0.53
PTPN11-207ENST00000639857 RRN3Q9NYV6 651 aa18.38■□□□□ 0.53
PTPN11-207ENST00000639857 TMEM63CQ9P1W3 806 aa18.38■□□□□ 0.53
PTPN11-207ENST00000639857 TJP2Q9UDY2 1190 aa18.38■□□□□ 0.53
PTPN11-207ENST00000639857 CLEC4EQ9ULY5 219 aa18.38■□□□□ 0.53
PTPN11-207ENST00000639857 SIK3Q9Y2K2 1263 aa18.38■□□□□ 0.53
PTPN11-207ENST00000639857 STON1Q9Y6Q2 735 aa18.38■□□□□ 0.53
PTPN11-207ENST00000639857 TSPAN3O60637 253 aa18.37■□□□□ 0.53
PTPN11-207ENST00000639857 DAB1O75553 588 aa18.37■□□□□ 0.53
PTPN11-207ENST00000639857 ERBB2P04626 1255 aa18.37■□□□□ 0.53
PTPN11-207ENST00000639857 ZNF806P0C7X5 589 aa18.37■□□□□ 0.53
PTPN11-207ENST00000639857 HLA-FP30511 346 aa18.37■□□□□ 0.53
PTPN11-207ENST00000639857 MPLP40238 635 aa18.37■□□□□ 0.53
PTPN11-207ENST00000639857 DPP6P42658 865 aa18.37■□□□□ 0.53
PTPN11-207ENST00000639857 GABRB2P47870 512 aa18.37■□□□□ 0.53
PTPN11-207ENST00000639857 JAM2P57087 298 aa18.37■□□□□ 0.53
PTPN11-207ENST00000639857 SLC6A3Q01959 620 aa18.37■□□□□ 0.53
PTPN11-207ENST00000639857 NCAPHQ15003 741 aa18.37■□□□□ 0.53
PTPN11-207ENST00000639857 MAP7D1Q3KQU3 841 aa18.37■□□□□ 0.53
PTPN11-207ENST00000639857 PLA2G2CQ5R387 149 aa18.37■□□□□ 0.53
PTPN11-207ENST00000639857 FAM183BPQ6ZVS7 135 aa18.37■□□□□ 0.53
PTPN11-207ENST00000639857 ERMP1Q7Z2K6 904 aa18.37■□□□□ 0.53
PTPN11-207ENST00000639857 EPS8L1Q8TE68 723 aa18.37■□□□□ 0.53
PTPN11-207ENST00000639857 RMDN1Q96DB5 314 aa18.37■□□□□ 0.53
PTPN11-207ENST00000639857 FAM204AQ9H8W3 233 aa18.37■□□□□ 0.53
PTPN11-207ENST00000639857 CACNA2D2Q9NY47 1150 aa18.37■□□□□ 0.53
PTPN11-207ENST00000639857 SLC12A6Q9UHW9 1150 aa18.37■□□□□ 0.53
PTPN11-207ENST00000639857 DCLK1O15075 740 aa18.36■□□□□ 0.53
PTPN11-207ENST00000639857 TBL1XO60907 577 aa18.36■□□□□ 0.53
PTPN11-207ENST00000639857 PABPC1P11940 636 aaKnown RBP18.36■□□□□ 0.53
PTPN11-207ENST00000639857 CCR1P32246 355 aa18.36■□□□□ 0.53
PTPN11-207ENST00000639857 WASP42768 502 aa18.36■□□□□ 0.53
PTPN11-207ENST00000639857 ARID5AQ03989 594 aa18.36■□□□□ 0.53
PTPN11-207ENST00000639857 MS4A13Q5J8X5 152 aa18.36■□□□□ 0.53
PTPN11-207ENST00000639857 OR6B2Q6IFH4 312 aa18.36■□□□□ 0.53
PTPN11-207ENST00000639857 RFWD3Q6PCD5 774 aa18.36■□□□□ 0.53
PTPN11-207ENST00000639857 SLC36A4Q6YBV0 504 aa18.36■□□□□ 0.53
PTPN11-207ENST00000639857 METTL3Q86U44 580 aaKnown RBP18.36■□□□□ 0.53
PTPN11-207ENST00000639857 DEFB106AQ8N104 65 aa18.36■□□□□ 0.53
PTPN11-207ENST00000639857 PGBD3Q8N328 593 aa18.36■□□□□ 0.53
PTPN11-207ENST00000639857 ATP6V0D2Q8N8Y2 350 aa18.36■□□□□ 0.53
PTPN11-207ENST00000639857 ADAM32Q8TC27 787 aa18.36■□□□□ 0.53
PTPN11-207ENST00000639857 NETO1Q8TDF5 533 aa18.36■□□□□ 0.53
PTPN11-207ENST00000639857 PRICKLE1Q96MT3 831 aaPredicted RBP18.36■□□□□ 0.53
PTPN11-207ENST00000639857 ERGIC2Q96RQ1 377 aa18.36■□□□□ 0.53
PTPN11-207ENST00000639857 CIPCQ9C0C6 399 aa18.36■□□□□ 0.53
PTPN11-207ENST00000639857 ARRDC1-AS1Q9H2J1 176 aa18.36■□□□□ 0.53
PTPN11-207ENST00000639857 VPS45Q9NRW7 570 aa18.36■□□□□ 0.53
PTPN11-207ENST00000639857 FAM207AQ9NSI2 230 aaPredicted RBP18.36■□□□□ 0.53
PTPN11-207ENST00000639857 CALCOCO1Q9P1Z2 691 aa18.36■□□□□ 0.53
PTPN11-207ENST00000639857 GGA2Q9UJY4 613 aa18.36■□□□□ 0.53
PTPN11-207ENST00000639857 NYNRINQ9P2P1 1898 aaKnown RBP18.35■□□□□ 0.53
PTPN11-207ENST00000639857 BCLAF3A2AJT9 711 aaKnown RBP18.35■□□□□ 0.53
PTPN11-207ENST00000639857 KCNU1A8MYU2 1149 aa18.35■□□□□ 0.53
PTPN11-207ENST00000639857 NDUFV2P19404 249 aa18.35■□□□□ 0.53
PTPN11-207ENST00000639857 CDK11BP21127 795 aaKnown RBP18.35■□□□□ 0.53
PTPN11-207ENST00000639857 BCKDHBP21953 392 aa18.35■□□□□ 0.53
PTPN11-207ENST00000639857 NOS2P35228 1153 aa18.35■□□□□ 0.53
PTPN11-207ENST00000639857 SOX5P35711 763 aa18.35■□□□□ 0.53
PTPN11-207ENST00000639857 MATKP42679 507 aa18.35■□□□□ 0.53
PTPN11-207ENST00000639857 IL12RB1P42701 662 aa18.35■□□□□ 0.53
PTPN11-207ENST00000639857 SGSHP51688 502 aa18.35■□□□□ 0.53
PTPN11-207ENST00000639857 POLR2FP61218 127 aaKnown RBP18.35■□□□□ 0.53
PTPN11-207ENST00000639857 FOXK2Q01167 660 aa18.35■□□□□ 0.53
PTPN11-207ENST00000639857 ZNF234Q14588 700 aa18.35■□□□□ 0.53
PTPN11-207ENST00000639857 TAF5Q15542 800 aa18.35■□□□□ 0.53
PTPN11-207ENST00000639857 ZC3H12AQ5D1E8 599 aaKnown RBP18.35■□□□□ 0.53
PTPN11-207ENST00000639857 TTC39BQ5VTQ0 682 aaPredicted RBP18.35■□□□□ 0.53
PTPN11-207ENST00000639857 TMEM215Q68D42 235 aa18.35■□□□□ 0.53
PTPN11-207ENST00000639857 KIAA1211LQ6NV74 962 aa18.35■□□□□ 0.53
PTPN11-207ENST00000639857 LPCAT2Q7L5N7 544 aa18.35■□□□□ 0.53
PTPN11-207ENST00000639857 NOP9Q86U38 636 aaKnown RBP18.35■□□□□ 0.53
PTPN11-207ENST00000639857 ADIPOR2Q86V24 386 aa18.35■□□□□ 0.53
PTPN11-207ENST00000639857 MFN1Q8IWA4 741 aa18.35■□□□□ 0.53
PTPN11-207ENST00000639857 CCDC117Q8IWD4 279 aaPredicted RBP18.35■□□□□ 0.53
PTPN11-207ENST00000639857 FIBINQ8TAL6 211 aa18.35■□□□□ 0.53
PTPN11-207ENST00000639857 C18orf8Q96DM3 657 aa18.35■□□□□ 0.53
PTPN11-207ENST00000639857 MRGPRX1Q96LB2 322 aa18.35■□□□□ 0.53
PTPN11-207ENST00000639857 NUCKS1Q9H1E3 243 aaKnown RBP18.35■□□□□ 0.53
PTPN11-207ENST00000639857 HSD3B7Q9H2F3 369 aa18.35■□□□□ 0.53
PTPN11-207ENST00000639857 FBRSQ9HAH7 460 aa18.35■□□□□ 0.53
PTPN11-207ENST00000639857 ABCB8Q9NUT2 735 aa18.35■□□□□ 0.53
PTPN11-207ENST00000639857 DDIT4Q9NX09 232 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms