RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 TMEM35BQ8NCS4 154 aa14.34□□□□□ -0.11
PNKP-228ENST00000637325 OLIG1Q8TAK6 271 aa14.34□□□□□ -0.11
PNKP-228ENST00000637325 WFIKKN2Q8TEU8 576 aa14.34□□□□□ -0.11
PNKP-228ENST00000637325 RNF34Q969K3 372 aa14.34□□□□□ -0.11
PNKP-228ENST00000637325 PCMTD1Q96MG8 357 aaPredicted RBP14.34□□□□□ -0.11
PNKP-228ENST00000637325 GABRG3Q99928 467 aa14.34□□□□□ -0.11
PNKP-228ENST00000637325 STK33Q9BYT3 514 aa14.34□□□□□ -0.11
PNKP-228ENST00000637325 IRX2Q9BZI1 471 aaPredicted RBP14.34□□□□□ -0.11
PNKP-228ENST00000637325 PLCB1Q9NQ66 1216 aa14.34□□□□□ -0.11
PNKP-228ENST00000637325 ASNSD1Q9NWL6 643 aa14.34□□□□□ -0.11
PNKP-228ENST00000637325 STIM2Q9P246 746 aa14.34□□□□□ -0.11
PNKP-228ENST00000637325 THAP10Q9P2Z0 257 aaPredicted RBP14.34□□□□□ -0.11
PNKP-228ENST00000637325 TJP2Q9UDY2 1190 aa14.34□□□□□ -0.11
PNKP-228ENST00000637325 SPTBN2O15020 2390 aa14.34□□□□□ -0.11
PNKP-228ENST00000637325 SYNJ2BP-COX16A0A087WUM0 186 aa14.33□□□□□ -0.12
PNKP-228ENST00000637325 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.33□□□□□ -0.12
PNKP-228ENST00000637325 HSF2BPO75031 334 aa14.33□□□□□ -0.12
PNKP-228ENST00000637325 GRAP2O75791 330 aa14.33□□□□□ -0.12
PNKP-228ENST00000637325 ZNF806P0C7X5 589 aa14.33□□□□□ -0.12
PNKP-228ENST00000637325 CYP11B1P15538 503 aa14.33□□□□□ -0.12
PNKP-228ENST00000637325 SLC6A4P31645 630 aa14.33□□□□□ -0.12
PNKP-228ENST00000637325 TAF5Q15542 800 aa14.33□□□□□ -0.12
PNKP-228ENST00000637325 FAM133BQ5BKY9 247 aaKnown RBP14.33□□□□□ -0.12
PNKP-228ENST00000637325 ZC3H12AQ5D1E8 599 aaKnown RBP14.33□□□□□ -0.12
PNKP-228ENST00000637325 MPP7Q5T2T1 576 aa14.33□□□□□ -0.12
PNKP-228ENST00000637325 TAF3Q5VWG9 929 aa14.33□□□□□ -0.12
PNKP-228ENST00000637325 PMS2CLQ68D20 193 aa14.33□□□□□ -0.12
PNKP-228ENST00000637325 KIAA1211LQ6NV74 962 aa14.33□□□□□ -0.12
PNKP-228ENST00000637325 KIAA1324Q6UXG2 1013 aaKnown RBP14.33□□□□□ -0.12
PNKP-228ENST00000637325 FAM183BPQ6ZVS7 135 aa14.33□□□□□ -0.12
PNKP-228ENST00000637325 CHST9Q7L1S5 443 aa14.33□□□□□ -0.12
PNKP-228ENST00000637325 DGLUCYQ7Z3D6 616 aa14.33□□□□□ -0.12
PNKP-228ENST00000637325 DEFB106AQ8N104 65 aa14.33□□□□□ -0.12
PNKP-228ENST00000637325 ATP6V0D2Q8N8Y2 350 aa14.33□□□□□ -0.12
PNKP-228ENST00000637325 ZNF557Q8N988 423 aaPredicted RBP14.33□□□□□ -0.12
PNKP-228ENST00000637325 SORCS1Q8WY21 1168 aa14.33□□□□□ -0.12
PNKP-228ENST00000637325 SLC39A13Q96H72 371 aa14.33□□□□□ -0.12
PNKP-228ENST00000637325 NAA15Q9BXJ9 866 aaKnown RBP14.33□□□□□ -0.12
PNKP-228ENST00000637325 NAT10Q9H0A0 1025 aaKnown RBP14.33□□□□□ -0.12
PNKP-228ENST00000637325 VPS45Q9NRW7 570 aa14.33□□□□□ -0.12
PNKP-228ENST00000637325 ABCB8Q9NUT2 735 aa14.33□□□□□ -0.12
PNKP-228ENST00000637325 COX16Q9P0S2 106 aa14.33□□□□□ -0.12
PNKP-228ENST00000637325 CALCOCO1Q9P1Z2 691 aa14.33□□□□□ -0.12
PNKP-228ENST00000637325 PLA2G4CQ9UP65 541 aa14.33□□□□□ -0.12
PNKP-228ENST00000637325 ADAMTS9Q9P2N4 1935 aa14.33□□□□□ -0.12
PNKP-228ENST00000637325 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.32□□□□□ -0.12
PNKP-228ENST00000637325 ZNF217O75362 1048 aa14.32□□□□□ -0.12
PNKP-228ENST00000637325 CAVIN2O95810 425 aa14.32□□□□□ -0.12
PNKP-228ENST00000637325 ERBB2P04626 1255 aa14.32□□□□□ -0.12
PNKP-228ENST00000637325 SLC2A3P11169 496 aa14.32□□□□□ -0.12
PNKP-228ENST00000637325 PABPC1P11940 636 aaKnown RBP14.32□□□□□ -0.12
PNKP-228ENST00000637325 NDUFV2P19404 249 aa14.32□□□□□ -0.12
PNKP-228ENST00000637325 HLA-FP30511 346 aa14.32□□□□□ -0.12
PNKP-228ENST00000637325 IL12RB1P42701 662 aa14.32□□□□□ -0.12
PNKP-228ENST00000637325 SGSHP51688 502 aa14.32□□□□□ -0.12
PNKP-228ENST00000637325 COPB1P53618 953 aaKnown RBP14.32□□□□□ -0.12
PNKP-228ENST00000637325 POLR2FP61218 127 aaKnown RBP14.32□□□□□ -0.12
PNKP-228ENST00000637325 SLC6A3Q01959 620 aa14.32□□□□□ -0.12
PNKP-228ENST00000637325 ZNF234Q14588 700 aa14.32□□□□□ -0.12
PNKP-228ENST00000637325 SF3A2Q15428 464 aaKnown RBP14.32□□□□□ -0.12
PNKP-228ENST00000637325 MAP7D1Q3KQU3 841 aa14.32□□□□□ -0.12
PNKP-228ENST00000637325 PTPN20Q4JDL3 420 aa14.32□□□□□ -0.12
PNKP-228ENST00000637325 FNDC3BQ53EP0 1204 aaKnown RBP14.32□□□□□ -0.12
PNKP-228ENST00000637325 NADSYN1Q6IA69 706 aa14.32□□□□□ -0.12
PNKP-228ENST00000637325 SERPINA13PQ6UXR4 307 aa14.32□□□□□ -0.12
PNKP-228ENST00000637325 SLC36A4Q6YBV0 504 aa14.32□□□□□ -0.12
PNKP-228ENST00000637325 CYP2U1Q7Z449 544 aa14.32□□□□□ -0.12
PNKP-228ENST00000637325 ZDHHC17Q8IUH5 632 aa14.32□□□□□ -0.12
PNKP-228ENST00000637325 MFN1Q8IWA4 741 aa14.32□□□□□ -0.12
PNKP-228ENST00000637325 TMEFF1Q8IYR6 380 aa14.32□□□□□ -0.12
PNKP-228ENST00000637325 AHI1Q8N157 1196 aa14.32□□□□□ -0.12
PNKP-228ENST00000637325 CARNMT1Q8N4J0 409 aa14.32□□□□□ -0.12
PNKP-228ENST00000637325 FRMD1Q8N878 549 aa14.32□□□□□ -0.12
PNKP-228ENST00000637325 MSANTD4Q8NCY6 345 aa14.32□□□□□ -0.12
PNKP-228ENST00000637325 NETO1Q8TDF5 533 aa14.32□□□□□ -0.12
PNKP-228ENST00000637325 NUCKS1Q9H1E3 243 aaKnown RBP14.32□□□□□ -0.12
PNKP-228ENST00000637325 FAM207AQ9NSI2 230 aaPredicted RBP14.32□□□□□ -0.12
PNKP-228ENST00000637325 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.32□□□□□ -0.12
PNKP-228ENST00000637325 DDIT4Q9NX09 232 aa14.32□□□□□ -0.12
PNKP-228ENST00000637325 GGA2Q9UJY4 613 aa14.32□□□□□ -0.12
PNKP-228ENST00000637325 NUMA1Q14980 2115 aa14.32□□□□□ -0.12
PNKP-228ENST00000637325 DCHS1Q96JQ0 3298 aa14.31□□□□□ -0.12
PNKP-228ENST00000637325 BCLAF3A2AJT9 711 aaKnown RBP14.31□□□□□ -0.12
PNKP-228ENST00000637325 F8VZ95 297 aa14.31□□□□□ -0.12
PNKP-228ENST00000637325 EPHX1P07099 455 aa14.31□□□□□ -0.12
PNKP-228ENST00000637325 POLR2EP19388 210 aaKnown RBP14.31□□□□□ -0.12
PNKP-228ENST00000637325 ABCB4P21439 1286 aa14.31□□□□□ -0.12
PNKP-228ENST00000637325 KLK7P49862 253 aa14.31□□□□□ -0.12
PNKP-228ENST00000637325 RNASE9P60153 205 aaKnown RBP14.31□□□□□ -0.12
PNKP-228ENST00000637325 RPS24P62847 133 aaKnown RBP14.31□□□□□ -0.12
PNKP-228ENST00000637325 RPL6Q02878 288 aaKnown RBP14.31□□□□□ -0.12
PNKP-228ENST00000637325 TYRO3Q06418 890 aa14.31□□□□□ -0.12
PNKP-228ENST00000637325 MS4A13Q5J8X5 152 aa14.31□□□□□ -0.12
PNKP-228ENST00000637325 PLA2G2CQ5R387 149 aa14.31□□□□□ -0.12
PNKP-228ENST00000637325 RAP1GAP2Q684P5 730 aa14.31□□□□□ -0.12
PNKP-228ENST00000637325 TMEM215Q68D42 235 aa14.31□□□□□ -0.12
PNKP-228ENST00000637325 OLFML1Q6UWY5 402 aa14.31□□□□□ -0.12
PNKP-228ENST00000637325 ARMCX6Q7L4S7 300 aa14.31□□□□□ -0.12
PNKP-228ENST00000637325 ERMP1Q7Z2K6 904 aa14.31□□□□□ -0.12
PNKP-228ENST00000637325 CHSY1Q86X52 802 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms