RNA–Protein interactions for RNA: ENST00000628569.1

RAB5B-211, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB5B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-211ENST00000628569 DUSP4Q13115 394 aa13.38□□□□□ -0.27
RAB5B-211ENST00000628569 RAB33AQ14088 237 aa13.38□□□□□ -0.27
RAB5B-211ENST00000628569 PRKD1Q15139 912 aaPredicted RBP13.38□□□□□ -0.27
RAB5B-211ENST00000628569 MGAT5BQ3V5L5 792 aa13.38□□□□□ -0.27
RAB5B-211ENST00000628569 ACBD5Q5T8D3 534 aaPredicted RBP13.38□□□□□ -0.27
RAB5B-211ENST00000628569 FAM72AQ5TYM5 149 aa13.38□□□□□ -0.27
RAB5B-211ENST00000628569 FAM72DQ6L9T8 149 aa13.38□□□□□ -0.27
RAB5B-211ENST00000628569 PDZD4Q76G19 769 aaPredicted RBP13.38□□□□□ -0.27
RAB5B-211ENST00000628569 CROCCP2Q86T23 111 aa13.38□□□□□ -0.27
RAB5B-211ENST00000628569 ZC3H18Q86VM9 953 aaKnown RBP13.38□□□□□ -0.27
RAB5B-211ENST00000628569 FAM72BQ86X60 149 aa13.38□□□□□ -0.27
RAB5B-211ENST00000628569 FAM71DQ8N9W8 422 aa13.38□□□□□ -0.27
RAB5B-211ENST00000628569 ZNF461Q8TAF7 563 aa13.38□□□□□ -0.27
RAB5B-211ENST00000628569 FBXO32Q969P5 355 aa13.38□□□□□ -0.27
RAB5B-211ENST00000628569 C1orf74Q96LT6 269 aa13.38□□□□□ -0.27
RAB5B-211ENST00000628569 SEPT5Q99719 369 aaPredicted RBP13.38□□□□□ -0.27
RAB5B-211ENST00000628569 BRD8Q9H0E9 1235 aa13.38□□□□□ -0.27
RAB5B-211ENST00000628569 CDC42EP4Q9H3Q1 356 aaKnown RBP13.38□□□□□ -0.27
RAB5B-211ENST00000628569 SEMA4AQ9H3S1 761 aa13.38□□□□□ -0.27
RAB5B-211ENST00000628569 TLR8Q9NR97 1041 aaKnown RBP13.38□□□□□ -0.27
RAB5B-211ENST00000628569 FNIP2Q9P278 1114 aa13.38□□□□□ -0.27
RAB5B-211ENST00000628569 SLC27A5Q9Y2P5 690 aa13.38□□□□□ -0.27
RAB5B-211ENST00000628569 TRIOBPQ9H2D6 2365 aa13.37□□□□□ -0.27
RAB5B-211ENST00000628569 SLC38A8A6NNN8 435 aa13.37□□□□□ -0.27
RAB5B-211ENST00000628569 E7ESA3 106 aa13.37□□□□□ -0.27
RAB5B-211ENST00000628569 CHADO15335 359 aa13.37□□□□□ -0.27
RAB5B-211ENST00000628569 EIF3HO15372 352 aaKnown RBP eCLIP13.37□□□□□ -0.27
RAB5B-211ENST00000628569 KCNN4O15554 427 aa13.37□□□□□ -0.27
RAB5B-211ENST00000628569 CREB3O43889 395 aa13.37□□□□□ -0.27
RAB5B-211ENST00000628569 LILRB3O75022 631 aa13.37□□□□□ -0.27
RAB5B-211ENST00000628569 RNF40O75150 1001 aa13.37□□□□□ -0.27
RAB5B-211ENST00000628569 GJB5O95377 273 aa13.37□□□□□ -0.27
RAB5B-211ENST00000628569 IGLV3-27P01718 113 aa13.37□□□□□ -0.27
RAB5B-211ENST00000628569 ACRP10323 421 aa13.37□□□□□ -0.27
RAB5B-211ENST00000628569 ERCC2P18074 760 aa13.37□□□□□ -0.27
RAB5B-211ENST00000628569 CREMQ03060 361 aa13.37□□□□□ -0.27
RAB5B-211ENST00000628569 ZNF33AQ06730 810 aa13.37□□□□□ -0.27
RAB5B-211ENST00000628569 IFRD2Q12894 506 aaPredicted RBP13.37□□□□□ -0.27
RAB5B-211ENST00000628569 MTA1Q13330 715 aa13.37□□□□□ -0.27
RAB5B-211ENST00000628569 KCNJ11Q14654 390 aa13.37□□□□□ -0.27
RAB5B-211ENST00000628569 PDK1Q15118 436 aa13.37□□□□□ -0.27
RAB5B-211ENST00000628569 TRIP4Q15650 581 aaPredicted RBP13.37□□□□□ -0.27
RAB5B-211ENST00000628569 SPOUT1Q5T280 376 aaKnown RBP13.37□□□□□ -0.27
RAB5B-211ENST00000628569 DENND2CQ68D51 928 aa13.37□□□□□ -0.27
RAB5B-211ENST00000628569 KIAA1841Q6NSI8 718 aa13.37□□□□□ -0.27
RAB5B-211ENST00000628569 GOLGA6L1Q8N7Z2 621 aa13.37□□□□□ -0.27
RAB5B-211ENST00000628569 PDZD8Q8NEN9 1154 aa13.37□□□□□ -0.27
RAB5B-211ENST00000628569 SP7Q8TDD2 431 aaPredicted RBP13.37□□□□□ -0.27
RAB5B-211ENST00000628569 FCRL2Q96LA5 508 aaPredicted RBP13.37□□□□□ -0.27
RAB5B-211ENST00000628569 MYRFLQ96LU7 910 aa13.37□□□□□ -0.27
RAB5B-211ENST00000628569 CDK5RAP1Q96SZ6 601 aaKnown RBP13.37□□□□□ -0.27
RAB5B-211ENST00000628569 FRMD8Q9BZ67 464 aaPredicted RBP13.37□□□□□ -0.27
RAB5B-211ENST00000628569 UBE2OQ9C0C9 1292 aaKnown RBP13.37□□□□□ -0.27
RAB5B-211ENST00000628569 C10orf88Q9H8K7 445 aa13.37□□□□□ -0.27
RAB5B-211ENST00000628569 RXFP1Q9HBX9 757 aa13.37□□□□□ -0.27
RAB5B-211ENST00000628569 TMBIM4Q9HC24 238 aa13.37□□□□□ -0.27
RAB5B-211ENST00000628569 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.37□□□□□ -0.27
RAB5B-211ENST00000628569 OR12D3Q9UGF7 316 aa13.37□□□□□ -0.27
RAB5B-211ENST00000628569 PPP1R12AO14974 1030 aaPredicted RBP13.36□□□□□ -0.27
RAB5B-211ENST00000628569 FGF10O15520 208 aaPredicted RBP13.36□□□□□ -0.27
RAB5B-211ENST00000628569 PAGE1O75459 146 aa13.36□□□□□ -0.27
RAB5B-211ENST00000628569 SOAT2O75908 522 aa13.36□□□□□ -0.27
RAB5B-211ENST00000628569 LRIG2O94898 1065 aa13.36□□□□□ -0.27
RAB5B-211ENST00000628569 TTC4O95801 387 aa13.36□□□□□ -0.27
RAB5B-211ENST00000628569 FGBP02675 491 aa13.36□□□□□ -0.27
RAB5B-211ENST00000628569 URODP06132 367 aa13.36□□□□□ -0.27
RAB5B-211ENST00000628569 ABHD2P08910 425 aa13.36□□□□□ -0.27
RAB5B-211ENST00000628569 SERPINB6P35237 376 aa13.36□□□□□ -0.27
RAB5B-211ENST00000628569 CBX1P83916 185 aa13.36□□□□□ -0.27
RAB5B-211ENST00000628569 FPGSQ05932 587 aa13.36□□□□□ -0.27
RAB5B-211ENST00000628569 RING1Q06587 406 aa13.36□□□□□ -0.27
RAB5B-211ENST00000628569 TAF10Q12962 218 aa13.36□□□□□ -0.27
RAB5B-211ENST00000628569 SLC29A2Q14542 456 aa13.36□□□□□ -0.27
RAB5B-211ENST00000628569 RASIP1Q5U651 963 aa13.36□□□□□ -0.27
RAB5B-211ENST00000628569 PSRC1Q6PGN9 363 aaPredicted RBP13.36□□□□□ -0.27
RAB5B-211ENST00000628569 TMCO2Q7Z6W1 182 aaPredicted RBP13.36□□□□□ -0.27
RAB5B-211ENST00000628569 TFB1MQ8WVM0 346 aaKnown RBP13.36□□□□□ -0.27
RAB5B-211ENST00000628569 HTR3CQ8WXA8 447 aa13.36□□□□□ -0.27
RAB5B-211ENST00000628569 CLP1Q92989 425 aaKnown RBP13.36□□□□□ -0.27
RAB5B-211ENST00000628569 TRMT2BQ96GJ1 504 aaKnown RBP13.36□□□□□ -0.27
RAB5B-211ENST00000628569 YME1L1Q96TA2 773 aa13.36□□□□□ -0.27
RAB5B-211ENST00000628569 NINJ2Q9NZG7 142 aa13.36□□□□□ -0.27
RAB5B-211ENST00000628569 SFMBT1Q9UHJ3 866 aa13.36□□□□□ -0.27
RAB5B-211ENST00000628569 SSX2IPQ9Y2D8 614 aa13.36□□□□□ -0.27
RAB5B-211ENST00000628569 MFHAS1Q9Y4C4 1052 aa13.36□□□□□ -0.27
RAB5B-211ENST00000628569 WASH4PA8MWX3 477 aa13.35□□□□□ -0.27
RAB5B-211ENST00000628569 ALOX15BO15296 676 aa13.35□□□□□ -0.27
RAB5B-211ENST00000628569 TCEA3O75764 348 aa13.35□□□□□ -0.27
RAB5B-211ENST00000628569 SEC24AO95486 1093 aa13.35□□□□□ -0.27
RAB5B-211ENST00000628569 VAV1P15498 845 aa13.35□□□□□ -0.27
RAB5B-211ENST00000628569 TSHRP16473 764 aa13.35□□□□□ -0.27
RAB5B-211ENST00000628569 HMGA1P17096 107 aaKnown RBP13.35□□□□□ -0.27
RAB5B-211ENST00000628569 RPL17P18621 184 aaKnown RBP13.35□□□□□ -0.27
RAB5B-211ENST00000628569 TPSB2P20231 275 aa13.35□□□□□ -0.27
RAB5B-211ENST00000628569 ACTN2P35609 894 aa13.35□□□□□ -0.27
RAB5B-211ENST00000628569 KPNA1P52294 538 aaPredicted RBP13.35□□□□□ -0.27
RAB5B-211ENST00000628569 MLLT6P55198 1093 aaPredicted RBP13.35□□□□□ -0.27
RAB5B-211ENST00000628569 TBX4P57082 545 aa13.35□□□□□ -0.27
RAB5B-211ENST00000628569 FAM193AP78312 1265 aa13.35□□□□□ -0.27
RAB5B-211ENST00000628569 PPIDQ08752 370 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms