RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 DENND1CQ8IV53 801 aa13.35□□□□□ -0.27
CCL4-201ENST00000613947 PLD4Q96BZ4 506 aa13.35□□□□□ -0.27
CCL4-201ENST00000613947 SERPINB11Q96P15 392 aa13.35□□□□□ -0.27
CCL4-201ENST00000613947 ADAM33Q9BZ11 813 aa13.35□□□□□ -0.27
CCL4-201ENST00000613947 METTL5Q9NRN9 209 aaKnown RBP13.35□□□□□ -0.27
CCL4-201ENST00000613947 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.35□□□□□ -0.27
CCL4-201ENST00000613947 WDR35Q9P2L0 1181 aa13.35□□□□□ -0.27
CCL4-201ENST00000613947 LSM7Q9UK45 103 aaKnown RBP13.35□□□□□ -0.27
CCL4-201ENST00000613947 PIAS3Q9Y6X2 628 aa13.35□□□□□ -0.27
CCL4-201ENST00000613947 TCRBV5S1A1TA0A578 114 aa13.34□□□□□ -0.27
CCL4-201ENST00000613947 TMEM221A6NGB7 291 aa13.34□□□□□ -0.27
CCL4-201ENST00000613947 SHISA7A6NL88 538 aa13.34□□□□□ -0.27
CCL4-201ENST00000613947 M0R296 226 aa13.34□□□□□ -0.27
CCL4-201ENST00000613947 RTN2O75298 545 aa13.34□□□□□ -0.27
CCL4-201ENST00000613947 IGLV3-25P01717 112 aa13.34□□□□□ -0.27
CCL4-201ENST00000613947 IGLV3-27P01718 113 aa13.34□□□□□ -0.27
CCL4-201ENST00000613947 RHOXF2BP0C7M4 288 aa13.34□□□□□ -0.27
CCL4-201ENST00000613947 TFE3P19532 575 aaPredicted RBP13.34□□□□□ -0.27
CCL4-201ENST00000613947 CD72P21854 359 aa13.34□□□□□ -0.27
CCL4-201ENST00000613947 HARS2P49590 506 aaKnown RBP13.34□□□□□ -0.27
CCL4-201ENST00000613947 KPNA1P52294 538 aaPredicted RBP13.34□□□□□ -0.27
CCL4-201ENST00000613947 EIF4EBP2Q13542 120 aaPredicted RBP13.34□□□□□ -0.27
CCL4-201ENST00000613947 PPP1R2P3Q6NXS1 205 aa13.34□□□□□ -0.27
CCL4-201ENST00000613947 RHBDF2Q6PJF5 856 aa13.34□□□□□ -0.27
CCL4-201ENST00000613947 ARCQ7LC44 396 aa13.34□□□□□ -0.27
CCL4-201ENST00000613947 EMC1Q8N766 993 aa13.34□□□□□ -0.27
CCL4-201ENST00000613947 C3orf20Q8ND61 904 aa13.34□□□□□ -0.27
CCL4-201ENST00000613947 NT5C3BQ969T7 300 aa13.34□□□□□ -0.27
CCL4-201ENST00000613947 OTUB2Q96DC9 234 aa13.34□□□□□ -0.27
CCL4-201ENST00000613947 VCPIP1Q96JH7 1222 aa13.34□□□□□ -0.27
CCL4-201ENST00000613947 RHOXF2Q9BQY4 288 aa13.34□□□□□ -0.27
CCL4-201ENST00000613947 DDX23Q9BUQ8 820 aaKnown RBP13.34□□□□□ -0.27
CCL4-201ENST00000613947 DCLK3Q9C098 648 aa13.34□□□□□ -0.27
CCL4-201ENST00000613947 ISCUQ9H1K1 167 aa13.34□□□□□ -0.27
CCL4-201ENST00000613947 C11orf16Q9NQ32 467 aa13.34□□□□□ -0.27
CCL4-201ENST00000613947 DDIT4Q9NX09 232 aa13.34□□□□□ -0.27
CCL4-201ENST00000613947 AGO1Q9UL18 857 aaKnown RBP13.34□□□□□ -0.27
CCL4-201ENST00000613947 TLR6Q9Y2C9 796 aa13.34□□□□□ -0.27
CCL4-201ENST00000613947 COL4A3Q01955 1670 aa13.34□□□□□ -0.27
CCL4-201ENST00000613947 SYNJ2BP-COX16A0A087WUM0 186 aa13.33□□□□□ -0.28
CCL4-201ENST00000613947 FAM86C2PA6NEL3 165 aa13.33□□□□□ -0.28
CCL4-201ENST00000613947 IRAK2O43187 625 aa13.33□□□□□ -0.28
CCL4-201ENST00000613947 NFATC1O95644 943 aa13.33□□□□□ -0.28
CCL4-201ENST00000613947 CYP17A1P05093 508 aa13.33□□□□□ -0.28
CCL4-201ENST00000613947 KRT3P12035 628 aa13.33□□□□□ -0.28
CCL4-201ENST00000613947 RING1Q06587 406 aa13.33□□□□□ -0.28
CCL4-201ENST00000613947 NNTQ13423 1086 aa13.33□□□□□ -0.28
CCL4-201ENST00000613947 DHCR24Q15392 516 aa13.33□□□□□ -0.28
CCL4-201ENST00000613947 ASTE1Q2TB18 679 aaPredicted RBP13.33□□□□□ -0.28
CCL4-201ENST00000613947 LY6G5CQ5SRR4 150 aa13.33□□□□□ -0.28
CCL4-201ENST00000613947 OTUD1Q5VV17 481 aaPredicted RBP13.33□□□□□ -0.28
CCL4-201ENST00000613947 PAPD7Q5XG87 772 aaKnown RBP13.33□□□□□ -0.28
CCL4-201ENST00000613947 ALKBH5Q6P6C2 394 aaKnown RBP13.33□□□□□ -0.28
CCL4-201ENST00000613947 TPRG1Q6ZUI0 275 aa13.33□□□□□ -0.28
CCL4-201ENST00000613947 CPA6Q8N4T0 437 aa13.33□□□□□ -0.28
CCL4-201ENST00000613947 JOSD2Q8TAC2 188 aa13.33□□□□□ -0.28
CCL4-201ENST00000613947 CHFRQ96EP1 664 aa13.33□□□□□ -0.28
CCL4-201ENST00000613947 SLC39A13Q96H72 371 aa13.33□□□□□ -0.28
CCL4-201ENST00000613947 FCRL2Q96LA5 508 aaPredicted RBP13.33□□□□□ -0.28
CCL4-201ENST00000613947 NPY6RQ99463 290 aa13.33□□□□□ -0.28
CCL4-201ENST00000613947 SELENOOQ9BVL4 669 aa13.33□□□□□ -0.28
CCL4-201ENST00000613947 COX16Q9P0S2 106 aa13.33□□□□□ -0.28
CCL4-201ENST00000613947 ZNF510Q9Y2H8 683 aa13.33□□□□□ -0.28
CCL4-201ENST00000613947 DMDP11532 3685 aa13.33□□□□□ -0.28
CCL4-201ENST00000613947 SSU72P8A0A1W2PR75 194 aa13.32□□□□□ -0.28
CCL4-201ENST00000613947 SIGLEC16A6NMB1 481 aa13.32□□□□□ -0.28
CCL4-201ENST00000613947 M0QYT0 321 aa13.32□□□□□ -0.28
CCL4-201ENST00000613947 EBAG9O00559 213 aa13.32□□□□□ -0.28
CCL4-201ENST00000613947 ATMINO43313 823 aaPredicted RBP13.32□□□□□ -0.28
CCL4-201ENST00000613947 GLULP15104 373 aa13.32□□□□□ -0.28
CCL4-201ENST00000613947 GJA4P35212 333 aa13.32□□□□□ -0.28
CCL4-201ENST00000613947 RFC1P35251 1148 aaPredicted RBP13.32□□□□□ -0.28
CCL4-201ENST00000613947 STARD6P59095 220 aa13.32□□□□□ -0.28
CCL4-201ENST00000613947 PRKCQQ04759 706 aa13.32□□□□□ -0.28
CCL4-201ENST00000613947 GFPT1Q06210 699 aaPredicted RBP13.32□□□□□ -0.28
CCL4-201ENST00000613947 NME3Q13232 169 aa13.32□□□□□ -0.28
CCL4-201ENST00000613947 SLC25A52Q3SY17 297 aa13.32□□□□□ -0.28
CCL4-201ENST00000613947 ZC3H12AQ5D1E8 599 aaKnown RBP13.32□□□□□ -0.28
CCL4-201ENST00000613947 NUGGCQ68CJ6 796 aa13.32□□□□□ -0.28
CCL4-201ENST00000613947 DNAJC24Q6P3W2 148 aa13.32□□□□□ -0.28
CCL4-201ENST00000613947 TXNDC11Q6PKC3 985 aa13.32□□□□□ -0.28
CCL4-201ENST00000613947 TMEM25Q86YD3 366 aa13.32□□□□□ -0.28
CCL4-201ENST00000613947 UNC45BQ8IWX7 931 aa13.32□□□□□ -0.28
CCL4-201ENST00000613947 FAM76AQ8TAV0 307 aa13.32□□□□□ -0.28
CCL4-201ENST00000613947 RXFP2Q8WXD0 754 aa13.32□□□□□ -0.28
CCL4-201ENST00000613947 CFAP57Q96MR6 1250 aa13.32□□□□□ -0.28
CCL4-201ENST00000613947 C8orf33Q9H7E9 229 aaPredicted RBP13.32□□□□□ -0.28
CCL4-201ENST00000613947 NHEJ1Q9H9Q4 299 aaPredicted RBP13.32□□□□□ -0.28
CCL4-201ENST00000613947 RRN3Q9NYV6 651 aa13.32□□□□□ -0.28
CCL4-201ENST00000613947 STAP1Q9ULZ2 295 aa13.32□□□□□ -0.28
CCL4-201ENST00000613947 COL4A2P08572 1712 aa13.32□□□□□ -0.28
CCL4-201ENST00000613947 C2CD4BA6NLJ0 364 aa13.32□□□□□ -0.28
CCL4-201ENST00000613947 GOLGA8KD6RF30 607 aa13.32□□□□□ -0.28
CCL4-201ENST00000613947 SPECC1L-ADORA2AF8WAN1 911 aa13.32□□□□□ -0.28
CCL4-201ENST00000613947 PDGFRAP16234 1089 aa13.32□□□□□ -0.28
CCL4-201ENST00000613947 GBP1P32455 592 aa13.32□□□□□ -0.28
CCL4-201ENST00000613947 CTHP32929 405 aa13.32□□□□□ -0.28
CCL4-201ENST00000613947 SULT1E1P49888 294 aa13.32□□□□□ -0.28
CCL4-201ENST00000613947 VCPP55072 806 aaKnown RBP13.32□□□□□ -0.28
CCL4-201ENST00000613947 MLLT6P55198 1093 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms