RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 APOEP02649 317 aa28.92■■■□□ 2.22
CSPG5-205ENST00000610462 UNC5AQ6ZN44 842 aa28.92■■■□□ 2.22
CSPG5-205ENST00000610462 PAXIP1Q6ZW49 1069 aaPredicted RBP28.92■■■□□ 2.22
CSPG5-205ENST00000610462 CTU1Q7Z7A3 348 aaKnown RBP28.92■■■□□ 2.22
CSPG5-205ENST00000610462 PKMYT1Q99640 499 aa28.92■■■□□ 2.22
CSPG5-205ENST00000610462 DDIT4Q9NX09 232 aa28.92■■■□□ 2.22
CSPG5-205ENST00000610462 SQORQ9Y6N5 450 aa28.92■■■□□ 2.22
CSPG5-205ENST00000610462 FAM72CH0Y354 149 aa28.92■■■□□ 2.22
CSPG5-205ENST00000610462 RNF103O00237 685 aa28.92■■■□□ 2.22
CSPG5-205ENST00000610462 HCAR3P49019 387 aa28.92■■■□□ 2.22
CSPG5-205ENST00000610462 FAM72AQ5TYM5 149 aa28.92■■■□□ 2.22
CSPG5-205ENST00000610462 PM20D1Q6GTS8 502 aa28.92■■■□□ 2.22
CSPG5-205ENST00000610462 FAM72DQ6L9T8 149 aa28.92■■■□□ 2.22
CSPG5-205ENST00000610462 LRRC6Q86X45 466 aa28.92■■■□□ 2.22
CSPG5-205ENST00000610462 FAM72BQ86X60 149 aa28.92■■■□□ 2.22
CSPG5-205ENST00000610462 ECHDC2Q86YB7 292 aa28.92■■■□□ 2.22
CSPG5-205ENST00000610462 PPM1NQ8N819 430 aa28.92■■■□□ 2.22
CSPG5-205ENST00000610462 NETO2Q8NC67 525 aa28.92■■■□□ 2.22
CSPG5-205ENST00000610462 LRRC8CQ8TDW0 803 aa28.92■■■□□ 2.22
CSPG5-205ENST00000610462 RSPH1Q8WYR4 309 aa28.92■■■□□ 2.22
CSPG5-205ENST00000610462 PRDM12Q9H4Q4 367 aa28.92■■■□□ 2.22
CSPG5-205ENST00000610462 ZNF180Q9UJW8 692 aa28.92■■■□□ 2.22
CSPG5-205ENST00000610462 GOLGA8RI6L899 631 aa28.91■■■□□ 2.22
CSPG5-205ENST00000610462 BDNFP23560 247 aa28.91■■■□□ 2.22
CSPG5-205ENST00000610462 DNAJC3Q13217 504 aa28.91■■■□□ 2.22
CSPG5-205ENST00000610462 ARL13BQ3SXY8 428 aa28.91■■■□□ 2.22
CSPG5-205ENST00000610462 TTC39BQ5VTQ0 682 aaPredicted RBP28.91■■■□□ 2.22
CSPG5-205ENST00000610462 FAM47EQ6ZV65 393 aa28.91■■■□□ 2.22
CSPG5-205ENST00000610462 TCP10LQ8TDR4 215 aa28.91■■■□□ 2.22
CSPG5-205ENST00000610462 HASPINQ8TF76 798 aa28.91■■■□□ 2.22
CSPG5-205ENST00000610462 KLF6Q99612 283 aaPredicted RBP28.91■■■□□ 2.22
CSPG5-205ENST00000610462 EIF2B3Q9NR50 452 aaKnown RBP28.91■■■□□ 2.22
CSPG5-205ENST00000610462 ABCF3Q9NUQ8 709 aa28.91■■■□□ 2.22
CSPG5-205ENST00000610462 RNF186Q9NXI6 227 aa28.91■■■□□ 2.22
CSPG5-205ENST00000610462 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.91■■■□□ 2.22
CSPG5-205ENST00000610462 STARD13Q9Y3M8 1113 aa28.91■■■□□ 2.22
CSPG5-205ENST00000610462 RAD54BQ9Y620 910 aa28.91■■■□□ 2.22
CSPG5-205ENST00000610462 MAD1L1Q9Y6D9 718 aa28.91■■■□□ 2.22
CSPG5-205ENST00000610462 NLRC5Q86WI3 1866 aa28.91■■■□□ 2.22
CSPG5-205ENST00000610462 MYO18AQ92614 2054 aaKnown RBP28.91■■■□□ 2.22
CSPG5-205ENST00000610462 I6L893 689 aaPredicted RBP28.9■■■□□ 2.22
CSPG5-205ENST00000610462 GSTA1P08263 222 aa28.9■■■□□ 2.22
CSPG5-205ENST00000610462 MLNP12872 115 aa28.9■■■□□ 2.22
CSPG5-205ENST00000610462 ERCC2P18074 760 aa28.9■■■□□ 2.22
CSPG5-205ENST00000610462 GRIA1P42261 906 aa28.9■■■□□ 2.22
CSPG5-205ENST00000610462 SEPT7Q16181 437 aaKnown RBP28.9■■■□□ 2.22
CSPG5-205ENST00000610462 PDZD4Q76G19 769 aaPredicted RBP28.9■■■□□ 2.22
CSPG5-205ENST00000610462 ZNF598Q86UK7 904 aaKnown RBP28.9■■■□□ 2.22
CSPG5-205ENST00000610462 CTAGE3PQ8IX95 158 aa28.9■■■□□ 2.22
CSPG5-205ENST00000610462 SCML4Q8N228 414 aa28.9■■■□□ 2.22
CSPG5-205ENST00000610462 MPP5Q8N3R9 675 aa28.9■■■□□ 2.22
CSPG5-205ENST00000610462 CCNYQ8ND76 341 aa28.9■■■□□ 2.22
CSPG5-205ENST00000610462 TMLHEQ9NVH6 421 aa28.9■■■□□ 2.22
CSPG5-205ENST00000610462 PATJQ8NI35 1801 aa28.9■■■□□ 2.22
CSPG5-205ENST00000610462 FRMPD3Q5JV73 1810 aa28.9■■■□□ 2.22
CSPG5-205ENST00000610462 CXorf49A8MYA2 514 aaPredicted RBP28.9■■■□□ 2.22
CSPG5-205ENST00000610462 ZNF189O75820 626 aaPredicted RBP28.9■■■□□ 2.22
CSPG5-205ENST00000610462 CABYRO75952 493 aa28.9■■■□□ 2.22
CSPG5-205ENST00000610462 TPI1P60174 286 aa28.9■■■□□ 2.22
CSPG5-205ENST00000610462 SLC18A2Q05940 514 aa28.9■■■□□ 2.22
CSPG5-205ENST00000610462 GSDMBQ8TAX9 411 aa28.9■■■□□ 2.22
CSPG5-205ENST00000610462 EDEM1Q92611 657 aa28.9■■■□□ 2.22
CSPG5-205ENST00000610462 SERAC1Q96JX3 654 aa28.9■■■□□ 2.22
CSPG5-205ENST00000610462 COLEC11Q9BWP8 271 aa28.9■■■□□ 2.22
CSPG5-205ENST00000610462 DMAP1Q9NPF5 467 aaPredicted RBP28.9■■■□□ 2.22
CSPG5-205ENST00000610462 PHTF1Q9UMS5 762 aa28.9■■■□□ 2.22
CSPG5-205ENST00000610462 PCDHA11Q9Y5I1 949 aa28.9■■■□□ 2.22
CSPG5-205ENST00000610462 DNAH12Q6ZR08 3092 aa28.89■■■□□ 2.22
CSPG5-205ENST00000610462 WASHC5Q12768 1159 aa28.89■■■□□ 2.22
CSPG5-205ENST00000610462 OVOS1Q6IE37 1185 aa28.89■■■□□ 2.22
CSPG5-205ENST00000610462 DCLRE1AQ6PJP8 1040 aa28.89■■■□□ 2.22
CSPG5-205ENST00000610462 SH2D5Q6ZV89 423 aa28.89■■■□□ 2.22
CSPG5-205ENST00000610462 CNPY4Q8N129 248 aa28.89■■■□□ 2.22
CSPG5-205ENST00000610462 SPOCK2Q92563 424 aa28.89■■■□□ 2.22
CSPG5-205ENST00000610462 INPPL1O15357 1258 aa28.89■■■□□ 2.21
CSPG5-205ENST00000610462 AMHP03971 560 aa28.89■■■□□ 2.21
CSPG5-205ENST00000610462 ADRA1DP25100 572 aa28.89■■■□□ 2.21
CSPG5-205ENST00000610462 CXCR3P49682 368 aa28.89■■■□□ 2.21
CSPG5-205ENST00000610462 PARP6Q2NL67 630 aa28.89■■■□□ 2.21
CSPG5-205ENST00000610462 THEM5Q8N1Q8 247 aa28.89■■■□□ 2.21
CSPG5-205ENST00000610462 OR10T2Q8NGX3 314 aa28.89■■■□□ 2.21
CSPG5-205ENST00000610462 SUSD3Q96L08 255 aa28.89■■■□□ 2.21
CSPG5-205ENST00000610462 SMYD2Q9NRG4 433 aa28.89■■■□□ 2.21
CSPG5-205ENST00000610462 ARHGEF37A1IGU5 675 aa28.88■■■□□ 2.21
CSPG5-205ENST00000610462 FAM155BO75949 473 aa28.88■■■□□ 2.21
CSPG5-205ENST00000610462 ALADP13716 330 aa28.88■■■□□ 2.21
CSPG5-205ENST00000610462 LRRC8BQ6P9F7 803 aa28.88■■■□□ 2.21
CSPG5-205ENST00000610462 RNF180Q86T96 592 aa28.88■■■□□ 2.21
CSPG5-205ENST00000610462 APOPT1Q96IL0 206 aa28.88■■■□□ 2.21
CSPG5-205ENST00000610462 WDCPQ9H6R7 721 aa28.88■■■□□ 2.21
CSPG5-205ENST00000610462 SEPT10Q9P0V9 454 aa28.88■■■□□ 2.21
CSPG5-205ENST00000610462 SLC12A4Q9UP95 1085 aa28.88■■■□□ 2.21
CSPG5-205ENST00000610462 LPXNO60711 386 aa28.87■■■□□ 2.21
CSPG5-205ENST00000610462 EDF1O60869 148 aaKnown RBP28.87■■■□□ 2.21
CSPG5-205ENST00000610462 ZNF135P52742 658 aaPredicted RBP28.87■■■□□ 2.21
CSPG5-205ENST00000610462 SP3Q02447 781 aa28.87■■■□□ 2.21
CSPG5-205ENST00000610462 MAPRE1Q15691 268 aaKnown RBP28.87■■■□□ 2.21
CSPG5-205ENST00000610462 LGSNQ5TDP6 509 aa28.87■■■□□ 2.21
CSPG5-205ENST00000610462 BSPRYQ5W0U4 402 aa28.87■■■□□ 2.21
CSPG5-205ENST00000610462 RNF43Q68DV7 783 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms