RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 AVPR1AP37288 418 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 SULT1E1P49888 294 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 AIF1P55008 147 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 HDAC4P56524 1084 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 EFEMP1Q12805 493 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 ZNF528Q3MIS6 628 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 SLC44A4Q53GD3 710 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 BRMS1LQ5PSV4 323 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 STXBP5Q5T5C0 1151 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 ZC3H14Q6PJT7 736 aaKnown RBP12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 SLFN11Q7Z7L1 901 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 PSTKQ8IV42 348 aaKnown RBP12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 UNC45BQ8IWX7 931 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 CCAR2Q8N163 923 aaKnown RBP12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 ZNF687Q8N1G0 1237 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 LRRC57Q8N9N7 239 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 SMARCD2Q92925 531 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 NTAN1Q96AB6 310 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 PLD4Q96BZ4 506 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 CFAP57Q96MR6 1250 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 ASB16Q96NS5 453 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 SLC22A12Q96S37 553 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 TBCBQ99426 244 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 ADAM33Q9BZ11 813 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 TRIM7Q9C029 511 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 TDP1Q9NUW8 608 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 SPATA6Q9NWH7 488 aaPredicted RBP12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 DDIT4Q9NX09 232 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 TFR2Q9UP52 801 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 DUSP10Q9Y6W6 482 aa12.1□□□□□ -0.47
CHMP2A-207ENST00000600804 KIAA1549LQ6ZVL6 1849 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 A0A0U1RQJ8 604 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 KCNU1A8MYU2 1149 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 M0QYT0 321 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 LILRB5O75023 590 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 RNF8O76064 485 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 CKMP06732 381 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 MBL2P11226 248 aaPredicted RBP12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 NOP2P46087 812 aaKnown RBP12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 PITX1P78337 314 aaPredicted RBP12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 PRKCQQ04759 706 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 SCAPQ12770 1279 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 USP4Q13107 963 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 UBXN2BQ14CS0 331 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 ARHGAP29Q52LW3 1261 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 LRRC38Q5VT99 294 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 NUGGCQ68CJ6 796 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 HTR3DQ70Z44 454 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 SND1Q7KZF4 910 aaKnown RBP eCLIP12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 ARID3BQ8IVW6 561 aaPredicted RBP12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 ARFGAP1Q8N6T3 406 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 CELF5Q8N6W0 485 aaKnown RBP12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 ZSCAN18Q8TBC5 510 aaPredicted RBP12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 FAM172AQ8WUF8 416 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 ATRIPQ8WXE1 791 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 ING5Q8WYH8 240 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 FCRL2Q96LA5 508 aaPredicted RBP12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 ZSWIM3Q96MP5 696 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 CYP2S1Q96SQ9 504 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 IRX2Q9BZI1 471 aaPredicted RBP12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 DCLK3Q9C098 648 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 NACA2Q9H009 215 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 SLITRK6Q9H5Y7 841 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 FAM204AQ9H8W3 233 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 TRPC7Q9HCX4 862 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 PARD6AQ9NPB6 346 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 ARHGEF38Q9NXL2 777 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 SFMBT1Q9UHJ3 866 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 RASAL2Q9UJF2 1139 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 STOML2Q9UJZ1 356 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 NUDT5Q9UKK9 219 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 FBXO4Q9UKT5 387 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 ZNF510Q9Y2H8 683 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 ZKSCAN5Q9Y2L8 839 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 SDK1Q7Z5N4 2213 aa12.09□□□□□ -0.47
CHMP2A-207ENST00000600804 SLC12A8A0AV02 714 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 E2F8A0AVK6 867 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 GRID2IPA4D2P6 1211 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 FAM170BA6NMN3 283 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 GREM1O60565 184 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 BUB1BO60566 1050 aaPredicted RBP12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 LRCH4O75427 683 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 STC2O76061 302 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 TDGF1P13385 188 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 TFE3P19532 575 aaPredicted RBP12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 FCARP24071 287 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 CCR1P32246 355 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 ATXN1P54253 815 aaKnown RBP12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 TBX4P57082 545 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 ZXDBP98169 803 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 ATP11AP98196 1134 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 CSTF1Q05048 431 aaKnown RBP12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 DEUP1Q05D60 604 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 ZNF77Q15935 545 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 C15orf59Q2T9L4 293 aaPredicted RBP12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 FAM78AQ5JUQ0 283 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 Q6ZNB5 142 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 POLNQ7Z5Q5 900 aa12.08□□□□□ -0.48
CHMP2A-207ENST00000600804 FAM217AQ8IXS0 508 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms