RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 SLITRK6Q9H5Y7 841 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 ARHGEF4Q9NR80 690 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 DZANK1Q9NVP4 752 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 HS3ST4Q9Y661 456 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 SHROOM3Q8TF72 1996 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 CCDC195A0A1B0GUA6 201 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 A0A1W2PRU2 124 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 APOC4-APOC2K7ER74 178 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 DCLK1O15075 740 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 STC2O76061 302 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 LRIG2O94898 1065 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 GLP2RO95838 553 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 APOC2P02655 101 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 AMPD1P23109 780 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 DDX6P26196 483 aaKnown RBP eCLIP15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 CHRNA3P32297 505 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 COILP38432 576 aaPredicted RBP15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 FNTAP49354 379 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 MLLT1Q03111 559 aaPredicted RBP15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 HYAL1Q12794 435 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 TCEAL5Q5H9L2 206 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 MS4A13Q5J8X5 152 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 TEX35Q5T0J7 233 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 ACBD5Q5T8D3 534 aaPredicted RBP15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 ZNF697Q5TEC3 545 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 TTC27Q6P3X3 843 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 DRICH1Q6PGQ1 229 aaPredicted RBP15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 C14orf80Q86SX3 495 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 UNC45BQ8IWX7 931 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 EFHBQ8N7U6 833 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 ARL14EPQ8N8R7 260 aaPredicted RBP15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 TTC13Q8NBP0 860 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 ADAMTS19Q8TE59 1207 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 TCEAL4Q96EI5 215 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 GCNAQ96QF7 691 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 KRT12Q99456 494 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 EPAS1Q99814 870 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 MAK16Q9BXY0 300 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 FRMD8P1Q9BZ68 369 aaPredicted RBP15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 TTYH1Q9H313 450 aaPredicted RBP15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 ATXN3LQ9H3M9 355 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 HOMER3Q9NSC5 361 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 ETNK2Q9NVF9 386 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 OR12D3Q9UGF7 316 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 SLC12A6Q9UHW9 1150 aa15.24■□□□□ 0.03
SHKBP1-211ENST00000595945 CLUHO75153 1309 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 MYO18AQ92614 2054 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 MYOFQ9NZM1 2061 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 APOL1O14791 398 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 CREB3O43889 395 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 GREM1O60565 184 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 MOCS2O96007 188 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 HMBSP08397 361 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 MBL2P11226 248 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 PECAM1P16284 738 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 ZFXP17010 805 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 GJA1P17302 382 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 HDCP19113 662 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 TGM2P21980 687 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 GGCXP38435 758 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 TPI1P60174 286 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 DYNLT1P63172 113 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 NTHL1P78549 312 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 PAFAH1B3Q15102 231 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 NOMO1Q15155 1222 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 SLC5A9Q2M3M2 681 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 C5orf22Q49AR2 442 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 GLE1Q53GS7 698 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 NCBP2-AS2Q69YL0 99 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 NADSYN1Q6IA69 706 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 PDZD4Q76G19 769 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 KLHL7Q8IXQ5 586 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 C12orf76Q8N812 135 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 SLC35B2Q8TB61 432 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 ACTL9Q8TC94 416 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 ATG4AQ8WYN0 398 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 NKD2Q969F2 451 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 WBP2Q969T9 261 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 MAGOHBQ96A72 148 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 CYP2S1Q96SQ9 504 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 SLC46A2Q9BY10 475 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 NACA2Q9H009 215 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 SFXN1Q9H9B4 322 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 TRPC7Q9HCX4 862 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 GKN1Q9NS71 199 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 PCYOX1Q9UHG3 505 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 COLQQ9Y215 455 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 DENND4AQ7Z401 1863 aa15.23■□□□□ 0.03
SHKBP1-211ENST00000595945 IGLV3-10A0A075B6K4 115 aa15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 TRAV19A0A0A6YYK7 116 aa15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 BHMG1C9JSJ3 638 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 LIASO43766 372 aa15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 ACSL4O60488 711 aa15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 LATS1O95835 1130 aa15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 KLKB1P03952 638 aa15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 ERCC2P18074 760 aa15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 POU3F3P20264 500 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 PTGIRP43119 386 aa15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 ZXDBP98169 803 aa15.22■□□□□ 0.03
SHKBP1-211ENST00000595945 OTUD4Q01804 1114 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms