RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 TGM1P22735 817 aa18.41■□□□□ 0.54
SHKBP1-204ENST00000594862 SLC6A3Q01959 620 aa18.41■□□□□ 0.54
SHKBP1-204ENST00000594862 ENPP2Q13822 863 aa18.41■□□□□ 0.54
SHKBP1-204ENST00000594862 PUM1Q14671 1186 aaKnown RBP eCLIP18.41■□□□□ 0.54
SHKBP1-204ENST00000594862 FAM133BQ5BKY9 247 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-204ENST00000594862 SYPL2Q5VXT5 272 aa18.41■□□□□ 0.54
SHKBP1-204ENST00000594862 OR6B2Q6IFH4 312 aa18.41■□□□□ 0.54
SHKBP1-204ENST00000594862 OLFML1Q6UWY5 402 aa18.41■□□□□ 0.54
SHKBP1-204ENST00000594862 SLC36A4Q6YBV0 504 aa18.41■□□□□ 0.54
SHKBP1-204ENST00000594862 PRR23CQ6ZRP0 262 aa18.41■□□□□ 0.54
SHKBP1-204ENST00000594862 FAM183BPQ6ZVS7 135 aa18.41■□□□□ 0.54
SHKBP1-204ENST00000594862 ATP6V0D2Q8N8Y2 350 aa18.41■□□□□ 0.54
SHKBP1-204ENST00000594862 SPAG5Q96R06 1193 aa18.41■□□□□ 0.54
SHKBP1-204ENST00000594862 CIPCQ9C0C6 399 aa18.41■□□□□ 0.54
SHKBP1-204ENST00000594862 GANQ9H2C0 597 aa18.41■□□□□ 0.54
SHKBP1-204ENST00000594862 PARD6AQ9NPB6 346 aa18.41■□□□□ 0.54
SHKBP1-204ENST00000594862 ZDHHC4Q9NPG8 344 aa18.41■□□□□ 0.54
SHKBP1-204ENST00000594862 VPS45Q9NRW7 570 aa18.41■□□□□ 0.54
SHKBP1-204ENST00000594862 TJP2Q9UDY2 1190 aa18.41■□□□□ 0.54
SHKBP1-204ENST00000594862 HCN2Q9UL51 889 aa18.41■□□□□ 0.54
SHKBP1-204ENST00000594862 STAP1Q9ULZ2 295 aa18.41■□□□□ 0.54
SHKBP1-204ENST00000594862 PAXBP1Q9Y5B6 917 aa18.41■□□□□ 0.54
SHKBP1-204ENST00000594862 STON1Q9Y6Q2 735 aa18.41■□□□□ 0.54
SHKBP1-204ENST00000594862 LRRC10BA6NIK2 292 aa18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 MAP3K13O43283 966 aa18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 SYNCRIPO60506 623 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 ATP5BP06576 529 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 PABPC1P11940 636 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 ZNF18P17022 549 aa18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 GABRG2P18507 467 aa18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 ABCB4P21439 1286 aa18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 CCR1P32246 355 aa18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 MPLP40238 635 aa18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 PTPN20Q4JDL3 420 aa18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 TTC39BQ5VTQ0 682 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 LPCAT2Q7L5N7 544 aa18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 MFN1Q8IWA4 741 aa18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 DEFB106AQ8N104 65 aa18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 C12orf50Q8NA57 414 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 NEK11Q8NG66 645 aa18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 ADAM32Q8TC27 787 aa18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 NETO1Q8TDF5 533 aa18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 EPS8L1Q8TE68 723 aa18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 P2RY11Q96G91 374 aa18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 PCMTD1Q96MG8 357 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 ACOX2Q99424 681 aa18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 ARRDC1-AS1Q9H2J1 176 aa18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 FAM207AQ9NSI2 230 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 DDIT4Q9NX09 232 aa18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 CACNA2D2Q9NY47 1150 aa18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 TMEM63CQ9P1W3 806 aa18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 GGA2Q9UJY4 613 aa18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 CDV3Q9UKY7 258 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 NCOR2Q9Y618 2525 aa18.4■□□□□ 0.54
SHKBP1-204ENST00000594862 MYO18AQ92614 2054 aaKnown RBP18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 SMTNL1A8MU46 457 aa18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 TBL1XO60907 577 aa18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 MOCS2O96007 188 aaPredicted RBP18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 ERBB2P04626 1255 aa18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 ZNF806P0C7X5 589 aa18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 HLA-FP30511 346 aa18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 SLC6A4P31645 630 aa18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 NOS2P35228 1153 aa18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 SOX5P35711 763 aa18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 STAT1P42224 750 aa18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 WASP42768 502 aa18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 GABRB2P47870 512 aa18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 POLR2FP61218 127 aaKnown RBP18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 CDH18Q13634 790 aa18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 MS4A13Q5J8X5 152 aa18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 NADSYN1Q6IA69 706 aa18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 RFWD3Q6PCD5 774 aa18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 SERPINA13PQ6UXR4 307 aa18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 TRIM72Q6ZMU5 477 aa18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 KIAA0907Q7Z7F0 614 aaPredicted RBP18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 ERICH1Q86X53 443 aa18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 C18orf8Q96DM3 657 aa18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 ERGIC2Q96RQ1 377 aa18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 FBRSQ9HAH7 460 aa18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 ABCB8Q9NUT2 735 aa18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 DLL3Q9NYJ7 618 aa18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 CALCOCO1Q9P1Z2 691 aa18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 PLA2G4CQ9UP65 541 aa18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 SIK3Q9Y2K2 1263 aa18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 SPTBN2O15020 2390 aa18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 RALGAPA1Q6GYQ0 2036 aa18.39■□□□□ 0.53
SHKBP1-204ENST00000594862 KCNU1A8MYU2 1149 aa18.38■□□□□ 0.53
SHKBP1-204ENST00000594862 F5H5T6 163 aa18.38■□□□□ 0.53
SHKBP1-204ENST00000594862 DCLK1O15075 740 aa18.38■□□□□ 0.53
SHKBP1-204ENST00000594862 AP5Z1O43299 807 aa18.38■□□□□ 0.53
SHKBP1-204ENST00000594862 ASLP04424 464 aa18.38■□□□□ 0.53
SHKBP1-204ENST00000594862 NDUFV2P19404 249 aa18.38■□□□□ 0.53
SHKBP1-204ENST00000594862 MATKP42679 507 aa18.38■□□□□ 0.53
SHKBP1-204ENST00000594862 OXCT1P55809 520 aa18.38■□□□□ 0.53
SHKBP1-204ENST00000594862 JAM2P57087 298 aa18.38■□□□□ 0.53
SHKBP1-204ENST00000594862 CDR2Q01850 454 aa18.38■□□□□ 0.53
SHKBP1-204ENST00000594862 UBXN1Q04323 297 aa18.38■□□□□ 0.53
SHKBP1-204ENST00000594862 EIF4EBP2Q13542 120 aaPredicted RBP18.38■□□□□ 0.53
SHKBP1-204ENST00000594862 ZNF234Q14588 700 aa18.38■□□□□ 0.53
SHKBP1-204ENST00000594862 NCAPHQ15003 741 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms