RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 NAP1L5Q96NT1 182 aaPredicted RBP14.48□□□□□ -0.09
CLIP3-205ENST00000592017 ACOX2Q99424 681 aa14.48□□□□□ -0.09
CLIP3-205ENST00000592017 SMOC1Q9H4F8 434 aa14.48□□□□□ -0.09
CLIP3-205ENST00000592017 SEPT11Q9NVA2 429 aaKnown RBP14.48□□□□□ -0.09
CLIP3-205ENST00000592017 A0A1B0GTH6 734 aa14.47□□□□□ -0.09
CLIP3-205ENST00000592017 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.47□□□□□ -0.09
CLIP3-205ENST00000592017 A0A1W2PQF6 199 aa14.47□□□□□ -0.09
CLIP3-205ENST00000592017 GOLGA8SH3BPF8 625 aa14.47□□□□□ -0.09
CLIP3-205ENST00000592017 IRAK2O43187 625 aa14.47□□□□□ -0.09
CLIP3-205ENST00000592017 DAB1O75553 588 aa14.47□□□□□ -0.09
CLIP3-205ENST00000592017 ALDH1A2O94788 518 aa14.47□□□□□ -0.09
CLIP3-205ENST00000592017 CAVIN2O95810 425 aa14.47□□□□□ -0.09
CLIP3-205ENST00000592017 TRUB2O95900 331 aaKnown RBP14.47□□□□□ -0.09
CLIP3-205ENST00000592017 PENKP01210 267 aaPredicted RBP14.47□□□□□ -0.09
CLIP3-205ENST00000592017 IGLV3-27P01718 113 aa14.47□□□□□ -0.09
CLIP3-205ENST00000592017 APOEP02649 317 aa14.47□□□□□ -0.09
CLIP3-205ENST00000592017 GLI1P08151 1106 aa14.47□□□□□ -0.09
CLIP3-205ENST00000592017 SDHBP21912 280 aa14.47□□□□□ -0.09
CLIP3-205ENST00000592017 RNASE9P60153 205 aaKnown RBP14.47□□□□□ -0.09
CLIP3-205ENST00000592017 CDK17Q00537 523 aa14.47□□□□□ -0.09
CLIP3-205ENST00000592017 FANCCQ00597 558 aa14.47□□□□□ -0.09
CLIP3-205ENST00000592017 FMO1Q01740 532 aa14.47□□□□□ -0.09
CLIP3-205ENST00000592017 SLC6A3Q01959 620 aa14.47□□□□□ -0.09
CLIP3-205ENST00000592017 NFKBIBQ15653 356 aa14.47□□□□□ -0.09
CLIP3-205ENST00000592017 FAM102AQ5T9C2 384 aaPredicted RBP14.47□□□□□ -0.09
CLIP3-205ENST00000592017 NUDT18Q6ZVK8 323 aa14.47□□□□□ -0.09
CLIP3-205ENST00000592017 BEND5Q7L4P6 421 aa14.47□□□□□ -0.09
CLIP3-205ENST00000592017 ZDHHC17Q8IUH5 632 aa14.47□□□□□ -0.09
CLIP3-205ENST00000592017 FRMD1Q8N878 549 aa14.47□□□□□ -0.09
CLIP3-205ENST00000592017 RLN3Q8WXF3 142 aa14.47□□□□□ -0.09
CLIP3-205ENST00000592017 C18orf8Q96DM3 657 aa14.47□□□□□ -0.09
CLIP3-205ENST00000592017 FCRL2Q96LA5 508 aaPredicted RBP14.47□□□□□ -0.09
CLIP3-205ENST00000592017 SLC2A13Q96QE2 648 aa14.47□□□□□ -0.09
CLIP3-205ENST00000592017 RXFP3Q9NSD7 469 aa14.47□□□□□ -0.09
CLIP3-205ENST00000592017 ASNSD1Q9NWL6 643 aa14.47□□□□□ -0.09
CLIP3-205ENST00000592017 CDV3Q9UKY7 258 aaKnown RBP14.47□□□□□ -0.09
CLIP3-205ENST00000592017 CLEC4EQ9ULY5 219 aa14.47□□□□□ -0.09
CLIP3-205ENST00000592017 TLR6Q9Y2C9 796 aa14.47□□□□□ -0.09
CLIP3-205ENST00000592017 MYOFQ9NZM1 2061 aa14.46□□□□□ -0.09
CLIP3-205ENST00000592017 GOLGA6L7A0A1B0GV03 622 aa14.46□□□□□ -0.09
CLIP3-205ENST00000592017 TCRBV21S2A2A0A5A6 115 aa14.46□□□□□ -0.09
CLIP3-205ENST00000592017 MED19A0JLT2 244 aaPredicted RBP14.46□□□□□ -0.09
CLIP3-205ENST00000592017 DCDC2BA2VCK2 349 aa14.46□□□□□ -0.09
CLIP3-205ENST00000592017 ACSL4O60488 711 aa14.46□□□□□ -0.09
CLIP3-205ENST00000592017 RHOBTB1O94844 696 aa14.46□□□□□ -0.09
CLIP3-205ENST00000592017 LATS1O95835 1130 aa14.46□□□□□ -0.09
CLIP3-205ENST00000592017 ZNF806P0C7X5 589 aa14.46□□□□□ -0.09
CLIP3-205ENST00000592017 CHRNB2P17787 502 aa14.46□□□□□ -0.09
CLIP3-205ENST00000592017 GBP1P32455 592 aa14.46□□□□□ -0.09
CLIP3-205ENST00000592017 RING1Q06587 406 aa14.46□□□□□ -0.09
CLIP3-205ENST00000592017 NME3Q13232 169 aa14.46□□□□□ -0.09
CLIP3-205ENST00000592017 NNTQ13423 1086 aa14.46□□□□□ -0.09
CLIP3-205ENST00000592017 ELF2Q15723 593 aa14.46□□□□□ -0.09
CLIP3-205ENST00000592017 MAP7D1Q3KQU3 841 aa14.46□□□□□ -0.09
CLIP3-205ENST00000592017 MPPE1Q53F39 396 aa14.46□□□□□ -0.09
CLIP3-205ENST00000592017 ZC3H12AQ5D1E8 599 aaKnown RBP14.46□□□□□ -0.09
CLIP3-205ENST00000592017 ADGRF1Q5T601 910 aa14.46□□□□□ -0.09
CLIP3-205ENST00000592017 RFWD3Q6PCD5 774 aa14.46□□□□□ -0.09
CLIP3-205ENST00000592017 MMS22LQ6ZRQ5 1243 aa14.46□□□□□ -0.09
CLIP3-205ENST00000592017 SLC26A9Q7LBE3 791 aa14.46□□□□□ -0.09
CLIP3-205ENST00000592017 XYLT1Q86Y38 959 aa14.46□□□□□ -0.09
CLIP3-205ENST00000592017 FAM217AQ8IXS0 508 aa14.46□□□□□ -0.09
CLIP3-205ENST00000592017 HMGB4Q8WW32 186 aa14.46□□□□□ -0.09
CLIP3-205ENST00000592017 RNF34Q969K3 372 aa14.46□□□□□ -0.09
CLIP3-205ENST00000592017 TSPY26PQ9H489 355 aa14.46□□□□□ -0.09
CLIP3-205ENST00000592017 CD248Q9HCU0 757 aa14.46□□□□□ -0.09
CLIP3-205ENST00000592017 POLMQ9NP87 494 aaPredicted RBP14.46□□□□□ -0.09
CLIP3-205ENST00000592017 DDIT4Q9NX09 232 aa14.46□□□□□ -0.09
CLIP3-205ENST00000592017 PCDHGA5Q9Y5G8 931 aa14.46□□□□□ -0.09
CLIP3-205ENST00000592017 A0A1W2PQC6 194 aa14.45□□□□□ -0.1
CLIP3-205ENST00000592017 GFRA2O00451 464 aa14.45□□□□□ -0.1
CLIP3-205ENST00000592017 SLC30A4O14863 429 aa14.45□□□□□ -0.1
CLIP3-205ENST00000592017 FERP16591 822 aa14.45□□□□□ -0.1
CLIP3-205ENST00000592017 NTSR1P30989 418 aa14.45□□□□□ -0.1
CLIP3-205ENST00000592017 SLC6A4P31645 630 aa14.45□□□□□ -0.1
CLIP3-205ENST00000592017 MPLP40238 635 aa14.45□□□□□ -0.1
CLIP3-205ENST00000592017 P2RY2P41231 377 aa14.45□□□□□ -0.1
CLIP3-205ENST00000592017 SGSHP51688 502 aa14.45□□□□□ -0.1
CLIP3-205ENST00000592017 UBASH3AP57075 661 aa14.45□□□□□ -0.1
CLIP3-205ENST00000592017 ZNF445P59923 1031 aa14.45□□□□□ -0.1
CLIP3-205ENST00000592017 PMS2CLQ68D20 193 aa14.45□□□□□ -0.1
CLIP3-205ENST00000592017 NADSYN1Q6IA69 706 aa14.45□□□□□ -0.1
CLIP3-205ENST00000592017 KIAA1211LQ6NV74 962 aa14.45□□□□□ -0.1
CLIP3-205ENST00000592017 TRIM72Q6ZMU5 477 aa14.45□□□□□ -0.1
CLIP3-205ENST00000592017 TRMT11Q7Z4G4 463 aaKnown RBP14.45□□□□□ -0.1
CLIP3-205ENST00000592017 PHLDB2Q86SQ0 1253 aa14.45□□□□□ -0.1
CLIP3-205ENST00000592017 SLC30A5Q8TAD4 765 aa14.45□□□□□ -0.1
CLIP3-205ENST00000592017 NETO1Q8TDF5 533 aa14.45□□□□□ -0.1
CLIP3-205ENST00000592017 ERLEC1Q96DZ1 483 aa14.45□□□□□ -0.1
CLIP3-205ENST00000592017 TMA16Q96EY4 203 aaKnown RBP14.45□□□□□ -0.1
CLIP3-205ENST00000592017 SLC39A13Q96H72 371 aa14.45□□□□□ -0.1
CLIP3-205ENST00000592017 C11orf70Q9BRQ4 267 aa14.45□□□□□ -0.1
CLIP3-205ENST00000592017 NUCKS1Q9H1E3 243 aaKnown RBP14.45□□□□□ -0.1
CLIP3-205ENST00000592017 XPO7Q9UIA9 1087 aaKnown RBP14.45□□□□□ -0.1
CLIP3-205ENST00000592017 MBD1Q9UIS9 605 aaPredicted RBP14.45□□□□□ -0.1
CLIP3-205ENST00000592017 STOML2Q9UJZ1 356 aa14.45□□□□□ -0.1
CLIP3-205ENST00000592017 SLC27A6Q9Y2P4 619 aa14.45□□□□□ -0.1
CLIP3-205ENST00000592017 BCLAF3A2AJT9 711 aaKnown RBP14.44□□□□□ -0.1
CLIP3-205ENST00000592017 LRRC53A6NM62 1247 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 WASH3PC4AMC7 463 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms