RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 FAM207AQ9NSI2 230 aaPredicted RBP10.9□□□□□ -0.66
TPM4-209ENST00000588483 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.9□□□□□ -0.66
TPM4-209ENST00000588483 PCDHGA5Q9Y5G8 931 aa10.9□□□□□ -0.66
TPM4-209ENST00000588483 ABCA7Q8IZY2 2146 aa10.9□□□□□ -0.67
TPM4-209ENST00000588483 RALGAPA1Q6GYQ0 2036 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 SMTNL1A8MU46 457 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 KCNU1A8MYU2 1149 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 FOXD2O60548 495 aaPredicted RBP10.89□□□□□ -0.67
TPM4-209ENST00000588483 APOEP02649 317 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 SLC2A3P11169 496 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 HOXB2P14652 356 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 NOS2P35228 1153 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 P2RY2P41231 377 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 MATKP42679 507 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 SGSHP51688 502 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 GSCP56915 257 aaPredicted RBP10.89□□□□□ -0.67
TPM4-209ENST00000588483 PITX1P78337 314 aaPredicted RBP10.89□□□□□ -0.67
TPM4-209ENST00000588483 CDK17Q00537 523 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 FMO1Q01740 532 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 CDR2Q01850 454 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 IQCB1Q15051 598 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 USP39Q53GS9 565 aaKnown RBP10.89□□□□□ -0.67
TPM4-209ENST00000588483 DCAF6Q58WW2 860 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 MS4A13Q5J8X5 152 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 SPDYCQ5MJ68 293 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 OTUD1Q5VV17 481 aaPredicted RBP10.89□□□□□ -0.67
TPM4-209ENST00000588483 OR6B2Q6IFH4 312 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 ANO7Q6IWH7 933 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 CEP68Q76N32 757 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 BNIPLQ7Z465 357 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.89□□□□□ -0.67
TPM4-209ENST00000588483 KBTBD6Q86V97 674 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 XYLT1Q86Y38 959 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 CHPFQ8IZ52 775 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 DEFB106AQ8N104 65 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 HJURPQ8NCD3 748 aaPredicted RBP10.89□□□□□ -0.67
TPM4-209ENST00000588483 FIBINQ8TAL6 211 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 ADAM32Q8TC27 787 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 UCMAQ8WVF2 138 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 C18orf8Q96DM3 657 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 SPAG5Q96R06 1193 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 ACOX2Q99424 681 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 ELOVL2Q9NXB9 296 aa10.89□□□□□ -0.67
TPM4-209ENST00000588483 GOLGA6L7A0A1B0GV03 622 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 TCRBV21S2A2A0A5A6 115 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 TSPAN3O60637 253 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 GFPT2O94808 682 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 CAVIN2O95810 425 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 MMEP08473 750 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 CHRNB2P17787 502 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 GABRG2P18507 467 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 CDK11BP21127 795 aaKnown RBP10.88□□□□□ -0.67
TPM4-209ENST00000588483 MMP8P22894 467 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 CCR1P32246 355 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 GBP1P32455 592 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 STAT1P42224 750 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 ZNF165P49910 485 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 UBXN1Q04323 297 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 BYSLQ13895 437 aaKnown RBP10.88□□□□□ -0.67
TPM4-209ENST00000588483 CSRP2Q16527 193 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 MAP7D1Q3KQU3 841 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 ZC3H12AQ5D1E8 599 aaKnown RBP10.88□□□□□ -0.67
TPM4-209ENST00000588483 PLA2G2CQ5R387 149 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 TTC39BQ5VTQ0 682 aaPredicted RBP10.88□□□□□ -0.67
TPM4-209ENST00000588483 PMS2CLQ68D20 193 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 SDE2Q6IQ49 451 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 RFWD3Q6PCD5 774 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 TRIM72Q6ZMU5 477 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 METTL3Q86U44 580 aaKnown RBP10.88□□□□□ -0.67
TPM4-209ENST00000588483 ADIPOR2Q86V24 386 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 ERICH1Q86X53 443 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 AHI1Q8N157 1196 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 ATP6V0D2Q8N8Y2 350 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 MSANTD4Q8NCY6 345 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 NEK11Q8NG66 645 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 NUP205Q92621 2012 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 NPY6RQ99463 290 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 PRMT1Q99873 361 aaKnown RBP10.88□□□□□ -0.67
TPM4-209ENST00000588483 HINFPQ9BQA5 517 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 ADAM33Q9BZ11 813 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 TPSD1Q9BZJ3 242 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 NUCKS1Q9H1E3 243 aaKnown RBP10.88□□□□□ -0.67
TPM4-209ENST00000588483 TMEM245Q9H330 911 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 SYNCQ9H7C4 482 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 PARD6AQ9NPB6 346 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 ZDHHC4Q9NPG8 344 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 NLRC4Q9NPP4 1024 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 RTN4Q9NQC3 1192 aaKnown RBP10.88□□□□□ -0.67
TPM4-209ENST00000588483 DDIT4Q9NX09 232 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 XPO7Q9UIA9 1087 aaKnown RBP10.88□□□□□ -0.67
TPM4-209ENST00000588483 GGA2Q9UJY4 613 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 TMEM59LQ9UK28 342 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 MYO6Q9UM54 1294 aa10.88□□□□□ -0.67
TPM4-209ENST00000588483 TNRC6BQ9UPQ9 1833 aaKnown RBP10.88□□□□□ -0.67
TPM4-209ENST00000588483 THADAQ6YHU6 1953 aa10.87□□□□□ -0.67
TPM4-209ENST00000588483 A0A1B0GTH6 734 aa10.87□□□□□ -0.67
TPM4-209ENST00000588483 A0A1W2PQC6 194 aa10.87□□□□□ -0.67
TPM4-209ENST00000588483 TYW5A2RUC4 315 aaKnown RBP10.87□□□□□ -0.67
TPM4-209ENST00000588483 TBL1XO60907 577 aa10.87□□□□□ -0.67
TPM4-209ENST00000588483 GRAP2O75791 330 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms