RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 SYT13Q7L8C5 426 aa9.04□□□□□ -0.96
SMG6-210ENST00000572205 IRF2BP2Q7Z5L9 587 aa9.04□□□□□ -0.96
SMG6-210ENST00000572205 TADA2BQ86TJ2 420 aa9.04□□□□□ -0.96
SMG6-210ENST00000572205 NAT16Q8N8M0 369 aa9.04□□□□□ -0.96
SMG6-210ENST00000572205 ATOH1Q92858 354 aaPredicted RBP9.04□□□□□ -0.96
SMG6-210ENST00000572205 MYO19Q96H55 970 aa9.04□□□□□ -0.96
SMG6-210ENST00000572205 HHIPQ96QV1 700 aa9.04□□□□□ -0.96
SMG6-210ENST00000572205 PNKPQ96T60 521 aa9.04□□□□□ -0.96
SMG6-210ENST00000572205 ACOX2Q99424 681 aa9.04□□□□□ -0.96
SMG6-210ENST00000572205 NPY6RQ99463 290 aa9.04□□□□□ -0.96
SMG6-210ENST00000572205 NACA2Q9H009 215 aa9.04□□□□□ -0.96
SMG6-210ENST00000572205 NUCKS1Q9H1E3 243 aaKnown RBP9.04□□□□□ -0.96
SMG6-210ENST00000572205 POPDC2Q9HBU9 364 aa9.04□□□□□ -0.96
SMG6-210ENST00000572205 ARHGEF4Q9NR80 690 aa9.04□□□□□ -0.96
SMG6-210ENST00000572205 ST7Q9NRC1 585 aa9.04□□□□□ -0.96
SMG6-210ENST00000572205 ZSCAN32Q9NX65 697 aa9.04□□□□□ -0.96
SMG6-210ENST00000572205 PLK2Q9NYY3 685 aa9.04□□□□□ -0.96
SMG6-210ENST00000572205 LSM7Q9UK45 103 aaKnown RBP9.04□□□□□ -0.96
SMG6-210ENST00000572205 MMP17Q9ULZ9 603 aa9.04□□□□□ -0.96
SMG6-210ENST00000572205 TLR6Q9Y2C9 796 aa9.04□□□□□ -0.96
SMG6-210ENST00000572205 PLXNA2O75051 1894 aa9.04□□□□□ -0.96
SMG6-210ENST00000572205 NUMA1Q14980 2115 aa9.04□□□□□ -0.96
SMG6-210ENST00000572205 CACNA1EQ15878 2313 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 GOLGA6L7A0A1B0GV03 622 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 A0A1W2PQC6 194 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 HRO43593 1189 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 HSF2BPO75031 334 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 TRUB2O95900 331 aaKnown RBP9.03□□□□□ -0.96
SMG6-210ENST00000572205 GLI1P08151 1106 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 NCAM1P13591 858 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 MMP8P22894 467 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 HLA-FP30511 346 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 SOX11P35716 441 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 GRIA2P42262 883 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 CXCL12P48061 93 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 FNTBP49356 437 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 SEC13P55735 322 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 YWHAZP63104 245 aaKnown RBP9.03□□□□□ -0.96
SMG6-210ENST00000572205 SLC6A3Q01959 620 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 UBXN1Q04323 297 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 DMC1Q14565 340 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 NR1I3Q14994 352 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 RFWD3Q6PCD5 774 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 MON1BQ7L1V2 547 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 RSRC2Q7L4I2 434 aaKnown RBP9.03□□□□□ -0.96
SMG6-210ENST00000572205 ALYREFQ86V81 257 aaKnown RBP9.03□□□□□ -0.96
SMG6-210ENST00000572205 WDR5BQ86VZ2 330 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 DEFB106AQ8N104 65 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 ALLCQ8N6M5 410 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 MDGA1Q8NFP4 955 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 BHMTQ93088 406 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 AZIN2Q96A70 460 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 PGAP3Q96FM1 320 aaPredicted RBP9.03□□□□□ -0.96
SMG6-210ENST00000572205 SERPINB11Q96P15 392 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 GABRG3Q99928 467 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 BBS2Q9BXC9 721 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 FAM126AQ9BYI3 521 aaPredicted RBP9.03□□□□□ -0.96
SMG6-210ENST00000572205 DCLK3Q9C098 648 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 PIGVQ9NUD9 493 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 DNAJC17Q9NVM6 304 aaKnown RBP9.03□□□□□ -0.96
SMG6-210ENST00000572205 ZNF212Q9UDV6 495 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 INTS6Q9UL03 887 aaKnown RBP9.03□□□□□ -0.96
SMG6-210ENST00000572205 NENFQ9UMX5 172 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 ASPMQ8IZT6 3477 aa9.03□□□□□ -0.96
SMG6-210ENST00000572205 CCDC163A0A0D9SF12 145 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 C10orf142B7Z368 130 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 SART1O43290 800 aaKnown RBP9.02□□□□□ -0.97
SMG6-210ENST00000572205 ACSL4O60488 711 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 GRAP2O75791 330 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 GJB6O95452 261 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 PRKCIP41743 596 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 TNFRSF4P43489 277 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 PXNP49023 591 aaPredicted RBP9.02□□□□□ -0.97
SMG6-210ENST00000572205 ATXN1P54253 815 aaKnown RBP9.02□□□□□ -0.97
SMG6-210ENST00000572205 TBX4P57082 545 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 MRPS21P82921 87 aaKnown RBP9.02□□□□□ -0.97
SMG6-210ENST00000572205 GOLGA8FQ08AF8 430 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 GOLGA8DPQ0D2H9 430 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 NR1H3Q13133 447 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 CRY1Q16526 586 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 PTPRNQ16849 979 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 CLEC16AQ2KHT3 1053 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 ANO4Q32M45 955 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 C5orf22Q49AR2 442 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 C2orf27AQ580R0 203 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 FIGNQ5HY92 759 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 FKBP15Q5T1M5 1219 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 ADGRF1Q5T601 910 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 NAA35Q5VZE5 725 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 NUGGCQ68CJ6 796 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 HGSNATQ68CP4 663 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 KIAA1211LQ6NV74 962 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 ARCQ7LC44 396 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 ADIPOR2Q86V24 386 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 ZNF677Q86XU0 584 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 OR52K2Q8NGK3 314 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 JOSD2Q8TAC2 188 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 CPA5Q8WXQ8 436 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 FAM149B1Q96BN6 582 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 KCNK17Q96T54 332 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms