RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 STIM2Q9P246 746 aa8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 GGA2Q9UJY4 613 aa8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 FNDC3AQ9Y2H6 1198 aaKnown RBP8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 PCDHB4Q9Y5E5 795 aa8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 ANKRD11Q6UB99 2663 aaPredicted RBP8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 TMEM8BA6NDV4 472 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 H0Y626 953 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 RNF225M0QZC1 329 aaPredicted RBP8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 TAF4O00268 1085 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 NPC1O15118 1278 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 TIMM44O43615 452 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 TBL1XO60907 577 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 TRIM16O95361 564 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 VDRP11473 427 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 PABPC1P11940 636 aaKnown RBP8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 BRD2P25440 801 aaKnown RBP8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 CD70P32970 193 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 DAOAP59103 153 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 MCCD1P59942 119 aaPredicted RBP8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 FKBP3Q00688 224 aaKnown RBP8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 RING1Q06587 406 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 SLC14A1Q13336 389 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 CAMK2GQ13555 558 aaPredicted RBP8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 EIF4HQ15056 248 aaKnown RBP8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 PTPRNQ16849 979 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 ZNF423Q2M1K9 1284 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 HLA-BQ31612 363 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 CCDC157Q569K6 752 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 ADGRF1Q5T601 910 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 ZNF658Q5TYW1 1059 aaPredicted RBP8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 MBLAC2Q68D91 279 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 PMF1Q6P1K2 205 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 RAB44Q7Z6P3 723 aaPredicted RBP8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 FAM217AQ8IXS0 508 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 FMR1NBQ8N0W7 255 aaPredicted RBP8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 CADM4Q8NFZ8 388 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 CLEC4CQ8WTT0 213 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 SLC35C1Q96A29 364 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 FAXDC2Q96IV6 333 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 ZSWIM1Q9BR11 485 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 SLC2A11Q9BYW1 496 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 MIS12Q9H081 205 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 LHX5Q9H2C1 402 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 TMEM245Q9H330 911 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 PRSS16Q9NQE7 514 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 TM7SF3Q9NS93 570 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 ABCC13Q9NSE7 274 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 OLA1Q9NTK5 396 aaKnown RBP8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 RMND1Q9NWS8 449 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 ARMCX3Q9UH62 379 aaPredicted RBP8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 PLA2G4CQ9UP65 541 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 COQ4Q9Y3A0 265 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 HBS1LQ9Y450 684 aaKnown RBP8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 ATP6V1DQ9Y5K8 247 aa8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 URB1O60287 2271 aaKnown RBP8.97□□□□□ -0.97
CTDNEP1-203ENST00000570385 GOLGA6L4A6NEF3 574 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 FAM47DPA6NHR8 397 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 M0QYV0 167 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 SLC16A3O15427 465 aaKnown RBP8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 FSBPO95073 299 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 IGLV3-19P01714 112 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 SETSIPP0DME0 302 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 SLC6A4P31645 630 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 MATKP42679 507 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 FMO5P49326 533 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 ZNF132P52740 706 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 TBX4P57082 545 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 YWHAEP62258 255 aaKnown RBP8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 RPS14P62263 151 aaKnown RBP8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 RPS24P62847 133 aaKnown RBP8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 IL9RQ01113 521 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 SCAPQ12770 1279 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 KIF19Q2TAC6 998 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 PKDCCQ504Y2 493 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 KLHL10Q6JEL2 608 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 C19orf48Q6RUI8 117 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 MMS22LQ6ZRQ5 1243 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 RRAGAQ7L523 313 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 AHI1Q8N157 1196 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 PPM1KQ8N3J5 372 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 UBR7Q8N806 425 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 C1orf216Q8TAB5 229 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 ADAM32Q8TC27 787 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 GANCQ8TET4 914 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 SLC35F5Q8WV83 523 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 KCTD13Q8WZ19 329 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 SMARCE1Q969G3 411 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 MYEOVQ96EZ4 313 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 CCDC34Q96HJ3 373 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 NT5C1BQ96P26 610 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 ZDHHC5Q9C0B5 715 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 CNGB3Q9NQW8 809 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 PCOLCE2Q9UKZ9 415 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 LHX6Q9UPM6 363 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 SNX11Q9Y5W9 270 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 ASPMQ8IZT6 3477 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 SPEGQ15772 3267 aa8.96□□□□□ -0.98
CTDNEP1-203ENST00000570385 ZZEF1O43149 2961 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 BAHCC1Q9P281 2608 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms