RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 ZNF165P49910 485 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 VASPP50552 380 aaPredicted RBP8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 SGSHP51688 502 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 SEC13P55735 322 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 PITX1P78337 314 aaPredicted RBP8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 UBXN1Q04323 297 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 KDSRQ06136 332 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 PTP4A2Q12974 167 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 SIM2Q14190 667 aaPredicted RBP8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 MS4A13Q5J8X5 152 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 SPDYCQ5MJ68 293 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 PLA2G2CQ5R387 149 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 C10orf76Q5T2E6 689 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 OTUD1Q5VV17 481 aaPredicted RBP8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 EGFLAMQ63HQ2 1017 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 TRIM72Q6ZMU5 477 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 CACNA2D4Q7Z3S7 1137 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 IRF2BP2Q7Z5L9 587 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 METTL3Q86U44 580 aaKnown RBP8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 ADIPOR2Q86V24 386 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 XYLT1Q86Y38 959 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 PASD1Q8IV76 773 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 DEFB106AQ8N104 65 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 CCDC33Q8N5R6 958 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 ZNF557Q8N988 423 aaPredicted RBP8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 MDGA1Q8NFP4 955 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 WFIKKN2Q8TEU8 576 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 DDI1Q8WTU0 396 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 BAP1Q92560 729 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 FAM149B1Q96BN6 582 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 C18orf8Q96DM3 657 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 BTN2A3PQ96KV6 586 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 HHIPQ96QV1 700 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 ACOX2Q99424 681 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 DDX50Q9BQ39 737 aaKnown RBP8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 ADAM33Q9BZ11 813 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 DUSP15Q9H1R2 295 aaPredicted RBP8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 TMEM245Q9H330 911 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 FAM207AQ9NSI2 230 aaPredicted RBP8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 ELOVL2Q9NXB9 296 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 PLK2Q9NYY3 685 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 CALCOCO1Q9P1Z2 691 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 CEP83Q9Y592 693 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 CEP250Q9BV73 2442 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 GOLGA6L7A0A1B0GV03 622 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 TCRBV5S1A1TA0A578 114 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 PCNX2A6NKB5 2137 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 PES1O00541 588 aaKnown RBP8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 CAPN9O14815 690 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 RPP40O75818 363 aaKnown RBP8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 GFPT2O94808 682 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 GBP1P32455 592 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 PBX1P40424 430 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 P2RY2P41231 377 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 CXCR3P49682 368 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 PLK1P53350 603 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 CDK17Q00537 523 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 SRSF5Q13243 272 aaKnown RBP8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 ARID5BQ14865 1188 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 SKOR2Q2VWA4 1001 aaPredicted RBP8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 MAP7D1Q3KQU3 841 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 SLC25A52Q3SY17 297 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 PLK5Q496M5 336 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 DCAF6Q58WW2 860 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 ZC3H12AQ5D1E8 599 aaKnown RBP8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 FIGNQ5HY92 759 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 ACBD5Q5T8D3 534 aaPredicted RBP8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 HEATR6Q6AI08 1181 aaKnown RBP8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 OR6B2Q6IFH4 312 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 TRNP1Q6NT89 227 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 ANKS1BQ7Z6G8 1248 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 C11orf74Q86VG3 221 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 ERICH1Q86X53 443 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 PHF13Q86YI8 300 aaPredicted RBP8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 ZNF683Q8IZ20 524 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 DCLK2Q8N568 766 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 FAM160A2Q8N612 972 aaPredicted RBP8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 KDM1BQ8NB78 822 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 TSTD1Q8NFU3 115 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 NEK11Q8NG66 645 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 SLC20A1Q8WUM9 679 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 TTC17Q96AE7 1141 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 MYEOVQ96EZ4 313 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 C1orf74Q96LT6 269 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 PRICKLE1Q96MT3 831 aaPredicted RBP8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 NAP1L5Q96NT1 182 aaPredicted RBP8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 PCDHB18PQ96TA0 734 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 EDEM3Q9BZQ6 932 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 TTYH3Q9C0H2 523 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 NUCKS1Q9H1E3 243 aaKnown RBP8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 POLMQ9NP87 494 aaPredicted RBP8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 NLRC4Q9NPP4 1024 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 ARHGEF38Q9NXL2 777 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 AIPL1Q9NZN9 384 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 PCDHGA5Q9Y5G8 931 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 DOCK9Q9BZ29 2069 aa8.49□□□□□ -1.05
HDGFL3-205ENST00000568129 LAMA1P25391 3075 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 SYCE3A1L190 88 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 I6L893 689 aaPredicted RBP8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 FOXD2O60548 495 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms