RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 DCLK2Q8N568 766 aa13.72□□□□□ -0.21
SMAD3-213ENST00000560175 FAM160A2Q8N612 972 aaPredicted RBP13.72□□□□□ -0.21
SMAD3-213ENST00000560175 GPR161Q8N6U8 529 aaKnown RBP13.72□□□□□ -0.21
SMAD3-213ENST00000560175 MDGA1Q8NFP4 955 aa13.72□□□□□ -0.21
SMAD3-213ENST00000560175 NEK11Q8NG66 645 aa13.72□□□□□ -0.21
SMAD3-213ENST00000560175 FIBINQ8TAL6 211 aa13.72□□□□□ -0.21
SMAD3-213ENST00000560175 MYEOVQ96EZ4 313 aa13.72□□□□□ -0.21
SMAD3-213ENST00000560175 BTN2A3PQ96KV6 586 aa13.72□□□□□ -0.21
SMAD3-213ENST00000560175 NPY6RQ99463 290 aa13.72□□□□□ -0.21
SMAD3-213ENST00000560175 PRMT1Q99873 361 aaKnown RBP13.72□□□□□ -0.21
SMAD3-213ENST00000560175 DDX50Q9BQ39 737 aaKnown RBP13.72□□□□□ -0.21
SMAD3-213ENST00000560175 POLMQ9NP87 494 aaPredicted RBP13.72□□□□□ -0.21
SMAD3-213ENST00000560175 NLRC4Q9NPP4 1024 aa13.72□□□□□ -0.21
SMAD3-213ENST00000560175 TMEM51Q9NW97 253 aa13.72□□□□□ -0.21
SMAD3-213ENST00000560175 RRN3Q9NYV6 651 aa13.72□□□□□ -0.21
SMAD3-213ENST00000560175 DNAH14Q0VDD8 3507 aa13.72□□□□□ -0.21
SMAD3-213ENST00000560175 NUP205Q92621 2012 aa13.71□□□□□ -0.21
SMAD3-213ENST00000560175 CEP250Q9BV73 2442 aa13.71□□□□□ -0.21
SMAD3-213ENST00000560175 THADAQ6YHU6 1953 aa13.71□□□□□ -0.21
SMAD3-213ENST00000560175 TEX33O43247 280 aa13.71□□□□□ -0.21
SMAD3-213ENST00000560175 TSPAN3O60637 253 aa13.71□□□□□ -0.21
SMAD3-213ENST00000560175 DAB1O75553 588 aa13.71□□□□□ -0.21
SMAD3-213ENST00000560175 ALDH1A2O94788 518 aa13.71□□□□□ -0.21
SMAD3-213ENST00000560175 GFPT2O94808 682 aa13.71□□□□□ -0.21
SMAD3-213ENST00000560175 SLC2A3P11169 496 aa13.71□□□□□ -0.21
SMAD3-213ENST00000560175 UNGP13051 313 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-213ENST00000560175 CDK17Q00537 523 aa13.71□□□□□ -0.21
SMAD3-213ENST00000560175 MTA1Q13330 715 aa13.71□□□□□ -0.21
SMAD3-213ENST00000560175 PLK5Q496M5 336 aa13.71□□□□□ -0.21
SMAD3-213ENST00000560175 ZC3H12AQ5D1E8 599 aaKnown RBP13.71□□□□□ -0.21
SMAD3-213ENST00000560175 OTUD1Q5VV17 481 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-213ENST00000560175 RFWD3Q6PCD5 774 aa13.71□□□□□ -0.21
SMAD3-213ENST00000560175 ANKS1BQ7Z6G8 1248 aa13.71□□□□□ -0.21
SMAD3-213ENST00000560175 ERICH1Q86X53 443 aa13.71□□□□□ -0.21
SMAD3-213ENST00000560175 ZNF557Q8N988 423 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-213ENST00000560175 ADAM32Q8TC27 787 aa13.71□□□□□ -0.21
SMAD3-213ENST00000560175 IPO4Q8TEX9 1081 aaKnown RBP13.71□□□□□ -0.21
SMAD3-213ENST00000560175 PRICKLE1Q96MT3 831 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-213ENST00000560175 ADAM33Q9BZ11 813 aa13.71□□□□□ -0.21
SMAD3-213ENST00000560175 DUSP15Q9H1R2 295 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-213ENST00000560175 ZDHHC4Q9NPG8 344 aa13.71□□□□□ -0.21
SMAD3-213ENST00000560175 CALCOCO1Q9P1Z2 691 aa13.71□□□□□ -0.21
SMAD3-213ENST00000560175 TMEM59LQ9UK28 342 aa13.71□□□□□ -0.21
SMAD3-213ENST00000560175 RAB23Q9ULC3 237 aa13.71□□□□□ -0.21
SMAD3-213ENST00000560175 MYO6Q9UM54 1294 aa13.71□□□□□ -0.21
SMAD3-213ENST00000560175 MUC22E2RYF6 1773 aaPredicted RBP13.71□□□□□ -0.22
SMAD3-213ENST00000560175 CEP192Q8TEP8 1941 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 A0A1B0GTH6 734 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 A0A1W2PQC6 194 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 ENDOD1O94919 500 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 CAVIN2O95810 425 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 GABRG2P18507 467 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 MMP8P22894 467 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 GBP1P32455 592 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 P2RY2P41231 377 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 GSCP56915 257 aaPredicted RBP13.7□□□□□ -0.22
SMAD3-213ENST00000560175 PTP4A2Q12974 167 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 NR1I3Q14994 352 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 MAP7D1Q3KQU3 841 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 C5orf22Q49AR2 442 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 USP39Q53GS9 565 aaKnown RBP13.7□□□□□ -0.22
SMAD3-213ENST00000560175 TAF3Q5VWG9 929 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 ANO7Q6IWH7 933 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 TRIM72Q6ZMU5 477 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 IRF2BP2Q7Z5L9 587 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 METTL3Q86U44 580 aaKnown RBP13.7□□□□□ -0.22
SMAD3-213ENST00000560175 ADIPOR2Q86V24 386 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 KBTBD6Q86V97 674 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 C11orf74Q86VG3 221 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 CHPFQ8IZ52 775 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 WFDC5Q8TCV5 224 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 WFIKKN2Q8TEU8 576 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 SLC20A1Q8WUM9 679 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 NAP1L5Q96NT1 182 aaPredicted RBP13.7□□□□□ -0.22
SMAD3-213ENST00000560175 SPAG5Q96R06 1193 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 PCDHB18PQ96TA0 734 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 SYT11Q9BT88 431 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 NUCKS1Q9H1E3 243 aaKnown RBP13.7□□□□□ -0.22
SMAD3-213ENST00000560175 NCDNQ9UBB6 729 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 XPO7Q9UIA9 1087 aaKnown RBP13.7□□□□□ -0.22
SMAD3-213ENST00000560175 STON1Q9Y6Q2 735 aa13.7□□□□□ -0.22
SMAD3-213ENST00000560175 TNRC6BQ9UPQ9 1833 aaKnown RBP13.69□□□□□ -0.22
SMAD3-213ENST00000560175 DOCK4Q8N1I0 1966 aa13.69□□□□□ -0.22
SMAD3-213ENST00000560175 SYCE3A1L190 88 aa13.69□□□□□ -0.22
SMAD3-213ENST00000560175 WASH3PC4AMC7 463 aa13.69□□□□□ -0.22
SMAD3-213ENST00000560175 GRAP2O75791 330 aa13.69□□□□□ -0.22
SMAD3-213ENST00000560175 APOEP02649 317 aa13.69□□□□□ -0.22
SMAD3-213ENST00000560175 HOXB2P14652 356 aa13.69□□□□□ -0.22
SMAD3-213ENST00000560175 CCR1P32246 355 aa13.69□□□□□ -0.22
SMAD3-213ENST00000560175 IL12RB1P42701 662 aa13.69□□□□□ -0.22
SMAD3-213ENST00000560175 CXCR3P49682 368 aa13.69□□□□□ -0.22
SMAD3-213ENST00000560175 RPS24P62847 133 aaKnown RBP13.69□□□□□ -0.22
SMAD3-213ENST00000560175 SLC25A52Q3SY17 297 aa13.69□□□□□ -0.22
SMAD3-213ENST00000560175 ARTNQ5T4W7 220 aa13.69□□□□□ -0.22
SMAD3-213ENST00000560175 SDE2Q6IQ49 451 aa13.69□□□□□ -0.22
SMAD3-213ENST00000560175 KIAA1211LQ6NV74 962 aa13.69□□□□□ -0.22
SMAD3-213ENST00000560175 PRR23BQ6ZRT6 265 aa13.69□□□□□ -0.22
SMAD3-213ENST00000560175 CEP68Q76N32 757 aa13.69□□□□□ -0.22
SMAD3-213ENST00000560175 ATP6V0D2Q8N8Y2 350 aa13.69□□□□□ -0.22
SMAD3-213ENST00000560175 HJURPQ8NCD3 748 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms