RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 AZIN2Q96A70 460 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 ACSF2Q96CM8 615 aaPredicted RBP9.73□□□□□ -0.85
HERC1-206ENST00000559996 C1orf74Q96LT6 269 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 C16orf45Q96MC5 204 aaPredicted RBP9.73□□□□□ -0.85
HERC1-206ENST00000559996 ASB16Q96NS5 453 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 HAPLN3Q96S86 360 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 KCTD15Q96SI1 283 aaPredicted RBP9.73□□□□□ -0.85
HERC1-206ENST00000559996 TKTL2Q9H0I9 626 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 OSBPL2Q9H1P3 480 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 TRPV4Q9HBA0 871 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 TRPC7Q9HCX4 862 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 CD207Q9UJ71 328 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 AGO1Q9UL18 857 aaKnown RBP9.73□□□□□ -0.85
HERC1-206ENST00000559996 ARHGAP26Q9UNA1 814 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 USP15Q9Y4E8 981 aaPredicted RBP9.73□□□□□ -0.85
HERC1-206ENST00000559996 HS3ST4Q9Y661 456 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 TRAV19A0A0A6YYK7 116 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 CCDC66A2RUB6 948 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 LEFTY2O00292 366 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 PSTPIP1O43586 416 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 SPOPO43791 374 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 SRGAP2O75044 1071 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 PAGE1O75459 146 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 SRGAP2BP0DMP2 458 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 TNNT1P13805 278 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 PRLRP16471 622 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 MSNP26038 577 aaKnown RBP9.72□□□□□ -0.85
HERC1-206ENST00000559996 SLC6A4P31645 630 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 CCR1P32246 355 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 VIPR2P41587 438 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 MTHFRP42898 656 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 NRG1Q02297 640 aaPredicted RBP9.72□□□□□ -0.85
HERC1-206ENST00000559996 ZNF77Q15935 545 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 DPYSL2Q16555 572 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 C5orf22Q49AR2 442 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 FAM133BQ5BKY9 247 aaKnown RBP9.72□□□□□ -0.85
HERC1-206ENST00000559996 MS4A13Q5J8X5 152 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 MFSD7Q6UXD7 560 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 TADA2BQ86TJ2 420 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 PSTKQ8IV42 348 aaKnown RBP9.72□□□□□ -0.85
HERC1-206ENST00000559996 KATNAL2Q8IYT4 538 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 ZSCAN18Q8TBC5 510 aaPredicted RBP9.72□□□□□ -0.85
HERC1-206ENST00000559996 COG1Q8WTW3 980 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 ZDHHC16Q969W1 377 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 PLD4Q96BZ4 506 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 FAF2Q96CS3 445 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 ALS2CR12Q96Q35 445 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 NCAPGQ9BPX3 1015 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 RPP25Q9BUL9 199 aaKnown RBP9.72□□□□□ -0.85
HERC1-206ENST00000559996 PLA2G2FQ9BZM2 168 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 FAM204AQ9H8W3 233 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 ZWILCHQ9H900 591 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 PCDH18Q9HCL0 1135 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 PRDM6Q9NQX0 595 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 TDP1Q9NUW8 608 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 SMPD4Q9NXE4 827 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 GDE1Q9NZC3 331 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 ZNF212Q9UDV6 495 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 DNAI1Q9UI46 699 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 CDH7Q9ULB5 785 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 PRUNE2Q8WUY3 3088 aa9.72□□□□□ -0.85
HERC1-206ENST00000559996 HELZP42694 1942 aaKnown RBP9.72□□□□□ -0.85
HERC1-206ENST00000559996 NUP210Q8TEM1 1887 aaPredicted RBP9.71□□□□□ -0.85
HERC1-206ENST00000559996 IGLV3-10A0A075B6K4 115 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 DRGXA6NNA5 263 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 MIF4GDA9UHW6 222 aaKnown RBP9.71□□□□□ -0.86
HERC1-206ENST00000559996 PI4K2BG5E9Z4 385 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 ZNF185O15231 689 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 PRPSAP2O60256 369 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 ACSL4O60488 711 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 TUBB4AP04350 444 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 KRT7P08729 469 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 LAMP2P13473 410 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 KCNA5P22460 613 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 CORO1AP31146 461 aaKnown RBP9.71□□□□□ -0.86
HERC1-206ENST00000559996 HOXC13P31276 330 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 CXCR5P32302 372 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 GGCXP38435 758 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 CDKN2BP42772 138 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 IRAK1P51617 712 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 KPNA1P52294 538 aaPredicted RBP9.71□□□□□ -0.86
HERC1-206ENST00000559996 AIF1P55008 147 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 USP4Q13107 963 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 DPYSL3Q14195 570 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 RPS6KA1Q15418 735 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 HADHQ16836 314 aaKnown RBP9.71□□□□□ -0.86
HERC1-206ENST00000559996 LEXMQ3ZCV2 418 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 ARHGAP15Q53QZ3 475 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 TANGO2Q6ICL3 276 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 CES5AQ6NT32 575 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 THSD4Q6ZMP0 1018 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 EP400NLQ6ZTU2 488 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 DENND1CQ8IV53 801 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 RASGEF1CQ8N431 466 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 PQLC3Q8N755 202 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 ST13P5Q8NFI4 369 aaPredicted RBP9.71□□□□□ -0.86
HERC1-206ENST00000559996 EXD1Q8NHP7 514 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 SH3RF2Q8TEC5 729 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 PPM1EQ8WY54 764 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 BTN2A3PQ96KV6 586 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms