RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 ASCC3Q8N3C0 2202 aaKnown RBP18.45■□□□□ 0.54
HDDC3-205ENST00000559898 FOXD2O60548 495 aaPredicted RBP18.44■□□□□ 0.54
HDDC3-205ENST00000559898 FBXO21O94952 628 aa18.44■□□□□ 0.54
HDDC3-205ENST00000559898 KCNK5O95279 499 aa18.44■□□□□ 0.54
HDDC3-205ENST00000559898 MOCS2O96007 188 aaPredicted RBP18.44■□□□□ 0.54
HDDC3-205ENST00000559898 MTIF2P46199 727 aaKnown RBP18.44■□□□□ 0.54
HDDC3-205ENST00000559898 PEAR1Q5VY43 1037 aaPredicted RBP18.44■□□□□ 0.54
HDDC3-205ENST00000559898 GBP6Q6ZN66 633 aa18.44■□□□□ 0.54
HDDC3-205ENST00000559898 SYT12Q8IV01 421 aa18.44■□□□□ 0.54
HDDC3-205ENST00000559898 CFAP52Q8N1V2 620 aa18.44■□□□□ 0.54
HDDC3-205ENST00000559898 SHC3Q92529 594 aa18.44■□□□□ 0.54
HDDC3-205ENST00000559898 HSPA12BQ96MM6 686 aa18.44■□□□□ 0.54
HDDC3-205ENST00000559898 CPXM1Q96SM3 734 aa18.44■□□□□ 0.54
HDDC3-205ENST00000559898 PRDM16Q9HAZ2 1276 aa18.44■□□□□ 0.54
HDDC3-205ENST00000559898 APEX2Q9UBZ4 518 aa18.44■□□□□ 0.54
HDDC3-205ENST00000559898 GGA2Q9UJY4 613 aa18.44■□□□□ 0.54
HDDC3-205ENST00000559898 INTS6Q9UL03 887 aaKnown RBP18.44■□□□□ 0.54
HDDC3-205ENST00000559898 FGFR1OPO95684 399 aaKnown RBP18.43■□□□□ 0.54
HDDC3-205ENST00000559898 EPHX1P07099 455 aa18.43■□□□□ 0.54
HDDC3-205ENST00000559898 ENGP17813 658 aa18.43■□□□□ 0.54
HDDC3-205ENST00000559898 CLCN1P35523 988 aa18.43■□□□□ 0.54
HDDC3-205ENST00000559898 MAPK8P45983 427 aa18.43■□□□□ 0.54
HDDC3-205ENST00000559898 KCNMA1Q12791 1236 aa18.43■□□□□ 0.54
HDDC3-205ENST00000559898 PDCLQ13371 301 aa18.43■□□□□ 0.54
HDDC3-205ENST00000559898 EXOC3L4Q17RC7 722 aa18.43■□□□□ 0.54
HDDC3-205ENST00000559898 UAP1L1Q3KQV9 507 aa18.43■□□□□ 0.54
HDDC3-205ENST00000559898 FSCBQ5H9T9 825 aa18.43■□□□□ 0.54
HDDC3-205ENST00000559898 PSAPL1Q6NUJ1 521 aa18.43■□□□□ 0.54
HDDC3-205ENST00000559898 TMEM110Q86TL2 294 aa18.43■□□□□ 0.54
HDDC3-205ENST00000559898 TMPRSS6Q8IU80 811 aa18.43■□□□□ 0.54
HDDC3-205ENST00000559898 MLKLQ8NB16 471 aa18.43■□□□□ 0.54
HDDC3-205ENST00000559898 SLC2A11Q9BYW1 496 aa18.43■□□□□ 0.54
HDDC3-205ENST00000559898 ADAM33Q9BZ11 813 aa18.43■□□□□ 0.54
HDDC3-205ENST00000559898 TMEM245Q9H330 911 aa18.43■□□□□ 0.54
HDDC3-205ENST00000559898 SAMSN1Q9NSI8 373 aaKnown RBP18.43■□□□□ 0.54
HDDC3-205ENST00000559898 LMBRD1Q9NUN5 540 aa18.43■□□□□ 0.54
HDDC3-205ENST00000559898 USP36Q9P275 1121 aaKnown RBP18.43■□□□□ 0.54
HDDC3-205ENST00000559898 DNAJC12Q9UKB3 198 aa18.43■□□□□ 0.54
HDDC3-205ENST00000559898 SLCO1B1Q9Y6L6 691 aa18.43■□□□□ 0.54
HDDC3-205ENST00000559898 FOXN3O00409 490 aaPredicted RBP18.42■□□□□ 0.54
HDDC3-205ENST00000559898 AP5Z1O43299 807 aa18.42■□□□□ 0.54
HDDC3-205ENST00000559898 GRAP2O75791 330 aa18.42■□□□□ 0.54
HDDC3-205ENST00000559898 LATS1O95835 1130 aa18.42■□□□□ 0.54
HDDC3-205ENST00000559898 CFIP05156 583 aa18.42■□□□□ 0.54
HDDC3-205ENST00000559898 PABPC1P11940 636 aaKnown RBP18.42■□□□□ 0.54
HDDC3-205ENST00000559898 LMAN2Q12907 356 aa18.42■□□□□ 0.54
HDDC3-205ENST00000559898 ZC3H12AQ5D1E8 599 aaKnown RBP18.42■□□□□ 0.54
HDDC3-205ENST00000559898 MBLAC2Q68D91 279 aa18.42■□□□□ 0.54
HDDC3-205ENST00000559898 SLC47A2Q86VL8 602 aa18.42■□□□□ 0.54
HDDC3-205ENST00000559898 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.42■□□□□ 0.54
HDDC3-205ENST00000559898 C1orf131Q8NDD1 294 aaKnown RBP18.42■□□□□ 0.54
HDDC3-205ENST00000559898 TOE1Q96GM8 510 aaKnown RBP18.42■□□□□ 0.54
HDDC3-205ENST00000559898 MYO19Q96H55 970 aa18.42■□□□□ 0.54
HDDC3-205ENST00000559898 TMEM9BQ9NQ34 198 aa18.42■□□□□ 0.54
HDDC3-205ENST00000559898 ITM2CQ9NQX7 267 aa18.42■□□□□ 0.54
HDDC3-205ENST00000559898 WSB2Q9NYS7 404 aaPredicted RBP18.42■□□□□ 0.54
HDDC3-205ENST00000559898 EVLQ9UI08 416 aaPredicted RBP18.42■□□□□ 0.54
HDDC3-205ENST00000559898 NYNRINQ9P2P1 1898 aaKnown RBP18.41■□□□□ 0.54
HDDC3-205ENST00000559898 TOP3BO95985 862 aaKnown RBP18.41■□□□□ 0.54
HDDC3-205ENST00000559898 IGLV3-25P01717 112 aa18.41■□□□□ 0.54
HDDC3-205ENST00000559898 ERBB2P04626 1255 aa18.41■□□□□ 0.54
HDDC3-205ENST00000559898 CTSOP43234 321 aaPredicted RBP18.41■□□□□ 0.54
HDDC3-205ENST00000559898 TPMTP51580 245 aa18.41■□□□□ 0.54
HDDC3-205ENST00000559898 RING1Q06587 406 aa18.41■□□□□ 0.54
HDDC3-205ENST00000559898 EIF4EBP2Q13542 120 aaPredicted RBP18.41■□□□□ 0.54
HDDC3-205ENST00000559898 BYSLQ13895 437 aaKnown RBP18.41■□□□□ 0.54
HDDC3-205ENST00000559898 FNDC3BQ53EP0 1204 aaKnown RBP18.41■□□□□ 0.54
HDDC3-205ENST00000559898 RAP1GAP2Q684P5 730 aa18.41■□□□□ 0.54
HDDC3-205ENST00000559898 SLC23A3Q6PIS1 610 aa18.41■□□□□ 0.54
HDDC3-205ENST00000559898 SERPINA13PQ6UXR4 307 aa18.41■□□□□ 0.54
HDDC3-205ENST00000559898 SLC36A4Q6YBV0 504 aa18.41■□□□□ 0.54
HDDC3-205ENST00000559898 FAM183BPQ6ZVS7 135 aa18.41■□□□□ 0.54
HDDC3-205ENST00000559898 FAM124AQ86V42 546 aa18.41■□□□□ 0.54
HDDC3-205ENST00000559898 CIR1Q86X95 450 aaPredicted RBP18.41■□□□□ 0.54
HDDC3-205ENST00000559898 STK32AQ8WU08 396 aa18.41■□□□□ 0.54
HDDC3-205ENST00000559898 UCMAQ8WVF2 138 aa18.41■□□□□ 0.54
HDDC3-205ENST00000559898 ZNF419Q96HQ0 510 aaPredicted RBP18.41■□□□□ 0.54
HDDC3-205ENST00000559898 GPR174Q9BXC1 333 aa18.41■□□□□ 0.54
HDDC3-205ENST00000559898 THAP9Q9H5L6 903 aa18.41■□□□□ 0.54
HDDC3-205ENST00000559898 CAPN10Q9HC96 672 aa18.41■□□□□ 0.54
HDDC3-205ENST00000559898 TLR6Q9Y2C9 796 aa18.41■□□□□ 0.54
HDDC3-205ENST00000559898 SYNJ2BP-COX16A0A087WUM0 186 aa18.4■□□□□ 0.54
HDDC3-205ENST00000559898 IRAK2O43187 625 aa18.4■□□□□ 0.54
HDDC3-205ENST00000559898 MED7O43513 233 aa18.4■□□□□ 0.54
HDDC3-205ENST00000559898 ZNF217O75362 1048 aa18.4■□□□□ 0.54
HDDC3-205ENST00000559898 TRUB2O95900 331 aaKnown RBP18.4■□□□□ 0.54
HDDC3-205ENST00000559898 CD6P30203 668 aa18.4■□□□□ 0.54
HDDC3-205ENST00000559898 ACADSBP45954 432 aa18.4■□□□□ 0.54
HDDC3-205ENST00000559898 SLC11A2P49281 568 aa18.4■□□□□ 0.54
HDDC3-205ENST00000559898 NOVA1P51513 510 aaKnown RBP18.4■□□□□ 0.54
HDDC3-205ENST00000559898 IRAK1P51617 712 aa18.4■□□□□ 0.54
HDDC3-205ENST00000559898 STARD3Q14849 445 aa18.4■□□□□ 0.54
HDDC3-205ENST00000559898 EIF4HQ15056 248 aaKnown RBP18.4■□□□□ 0.54
HDDC3-205ENST00000559898 MAN2A1Q16706 1144 aa18.4■□□□□ 0.54
HDDC3-205ENST00000559898 TPD52L1Q16890 204 aaPredicted RBP18.4■□□□□ 0.54
HDDC3-205ENST00000559898 DCAF6Q58WW2 860 aa18.4■□□□□ 0.54
HDDC3-205ENST00000559898 MS4A13Q5J8X5 152 aa18.4■□□□□ 0.54
HDDC3-205ENST00000559898 SPDYCQ5MJ68 293 aa18.4■□□□□ 0.54
HDDC3-205ENST00000559898 SH3PXD2AQ5TCZ1 1133 aa18.4■□□□□ 0.54
HDDC3-205ENST00000559898 NUGGCQ68CJ6 796 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms