RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 GRAMD1AQ96CP6 724 aa16.44■□□□□ 0.22
USP8-208ENST00000559329 ZNF180Q9UJW8 692 aa16.44■□□□□ 0.22
USP8-208ENST00000559329 RAD54BQ9Y620 910 aa16.44■□□□□ 0.22
USP8-208ENST00000559329 CAPN7Q9Y6W3 813 aa16.44■□□□□ 0.22
USP8-208ENST00000559329 PPP1R12AO14974 1030 aaPredicted RBP16.43■□□□□ 0.22
USP8-208ENST00000559329 TM9SF1O15321 606 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 CABYRO75952 493 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 SUN1O94901 812 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 APOEP02649 317 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 ITGB1P05556 798 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 MLNP12872 115 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 GRIA1P42261 906 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 SCTRP47872 440 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 CXCR3P49682 368 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 SLC18A2Q05940 514 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 SF3A3Q12874 501 aaKnown RBP eCLIP16.43■□□□□ 0.22
USP8-208ENST00000559329 TRAF7Q6Q0C0 670 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 LRRTM3Q86VH5 581 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 MPP5Q8N3R9 675 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 ZNF276Q8N554 614 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 SUSD3Q96L08 255 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 PAIP2Q9BPZ3 127 aaKnown RBP16.43■□□□□ 0.22
USP8-208ENST00000559329 COLEC11Q9BWP8 271 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 PRDM12Q9H4Q4 367 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 DMAP1Q9NPF5 467 aaPredicted RBP16.43■□□□□ 0.22
USP8-208ENST00000559329 SMYD2Q9NRG4 433 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 DDIT4Q9NX09 232 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 ARL2BPQ9Y2Y0 163 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 CXorf49A8MYA2 514 aaPredicted RBP16.43■□□□□ 0.22
USP8-208ENST00000559329 F9P00740 461 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 INHBAP08476 426 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 ERCC2P18074 760 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 BDNFP23560 247 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 NEK3P51956 506 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 ACLYP53396 1101 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 DCLRE1AQ6PJP8 1040 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 LVRNQ6Q4G3 990 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 BEND5Q7L4P6 421 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 LRRC6Q86X45 466 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 TP53INP2Q8IXH6 220 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 COLGALT1Q8NBJ5 622 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 NETO2Q8NC67 525 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 GSDMBQ8TAX9 411 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 SPOCK2Q92563 424 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 SERAC1Q96JX3 654 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 TMEM209Q96SK2 561 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 ABCF3Q9NUQ8 709 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 SLC12A4Q9UP95 1085 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 INPP5FQ9Y2H2 1132 aa16.43■□□□□ 0.22
USP8-208ENST00000559329 FAM159BA6NKW6 160 aa16.42■□□□□ 0.22
USP8-208ENST00000559329 ZNF189O75820 626 aaPredicted RBP16.42■□□□□ 0.22
USP8-208ENST00000559329 MT-ND3P03897 115 aa16.42■□□□□ 0.22
USP8-208ENST00000559329 GSTA1P08263 222 aa16.42■□□□□ 0.22
USP8-208ENST00000559329 TYMPP19971 482 aa16.42■□□□□ 0.22
USP8-208ENST00000559329 SP3Q02447 781 aa16.42■□□□□ 0.22
USP8-208ENST00000559329 AP1B1Q10567 949 aa16.42■□□□□ 0.22
USP8-208ENST00000559329 STEAP4Q687X5 459 aa16.42■□□□□ 0.22
USP8-208ENST00000559329 OVOS1Q6IE37 1185 aa16.42■□□□□ 0.22
USP8-208ENST00000559329 LRRC8BQ6P9F7 803 aa16.42■□□□□ 0.22
USP8-208ENST00000559329 CYS1Q717R9 158 aa16.42■□□□□ 0.22
USP8-208ENST00000559329 TCP10LQ8TDR4 215 aa16.42■□□□□ 0.22
USP8-208ENST00000559329 HASPINQ8TF76 798 aa16.42■□□□□ 0.22
USP8-208ENST00000559329 PLCD4Q9BRC7 762 aa16.42■□□□□ 0.22
USP8-208ENST00000559329 PITPNM3Q9BZ71 974 aa16.42■□□□□ 0.22
USP8-208ENST00000559329 RGS18Q9NS28 235 aa16.42■□□□□ 0.22
USP8-208ENST00000559329 IGSF9Q9P2J2 1179 aa16.42■□□□□ 0.22
USP8-208ENST00000559329 NOD1Q9Y239 953 aa16.42■□□□□ 0.22
USP8-208ENST00000559329 STARD13Q9Y3M8 1113 aa16.42■□□□□ 0.22
USP8-208ENST00000559329 IKBKGQ9Y6K9 419 aa16.42■□□□□ 0.22
USP8-208ENST00000559329 F8W810 466 aa16.41■□□□□ 0.22
USP8-208ENST00000559329 B4GALT3O60512 393 aa16.41■□□□□ 0.22
USP8-208ENST00000559329 STK10O94804 968 aaKnown RBP16.41■□□□□ 0.22
USP8-208ENST00000559329 IGLV3-25P01717 112 aa16.41■□□□□ 0.22
USP8-208ENST00000559329 DHRS4L1P0CG22 281 aa16.41■□□□□ 0.22
USP8-208ENST00000559329 ALADP13716 330 aa16.41■□□□□ 0.22
USP8-208ENST00000559329 ADRA1DP25100 572 aa16.41■□□□□ 0.22
USP8-208ENST00000559329 GBP2P32456 591 aaPredicted RBP16.41■□□□□ 0.22
USP8-208ENST00000559329 ZNF135P52742 658 aaPredicted RBP16.41■□□□□ 0.22
USP8-208ENST00000559329 DNAJC3Q13217 504 aa16.41■□□□□ 0.22
USP8-208ENST00000559329 EIF4EBP2Q13542 120 aaPredicted RBP16.41■□□□□ 0.22
USP8-208ENST00000559329 PARP6Q2NL67 630 aa16.41■□□□□ 0.22
USP8-208ENST00000559329 ARL13BQ3SXY8 428 aa16.41■□□□□ 0.22
USP8-208ENST00000559329 TTC39BQ5VTQ0 682 aaPredicted RBP16.41■□□□□ 0.22
USP8-208ENST00000559329 HHATQ5VTY9 493 aa16.41■□□□□ 0.22
USP8-208ENST00000559329 BSPRYQ5W0U4 402 aa16.41■□□□□ 0.22
USP8-208ENST00000559329 RNF180Q86T96 592 aa16.41■□□□□ 0.22
USP8-208ENST00000559329 TAC4Q86UU9 113 aa16.41■□□□□ 0.22
USP8-208ENST00000559329 PACS2Q86VP3 889 aa16.41■□□□□ 0.22
USP8-208ENST00000559329 CNPY4Q8N129 248 aa16.41■□□□□ 0.22
USP8-208ENST00000559329 ZNF567Q8N184 647 aa16.41■□□□□ 0.22
USP8-208ENST00000559329 EDEM1Q92611 657 aa16.41■□□□□ 0.22
USP8-208ENST00000559329 APOPT1Q96IL0 206 aa16.41■□□□□ 0.22
USP8-208ENST00000559329 KLF6Q99612 283 aaPredicted RBP16.41■□□□□ 0.22
USP8-208ENST00000559329 TRIM56Q9BRZ2 755 aaKnown RBP16.41■□□□□ 0.22
USP8-208ENST00000559329 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.41■□□□□ 0.22
USP8-208ENST00000559329 PCDHA11Q9Y5I1 949 aa16.41■□□□□ 0.22
USP8-208ENST00000559329 HTTP42858 3142 aa16.41■□□□□ 0.22
USP8-208ENST00000559329 GOLGA8RI6L899 631 aa16.41■□□□□ 0.22
USP8-208ENST00000559329 EDF1O60869 148 aaKnown RBP16.41■□□□□ 0.22
USP8-208ENST00000559329 CKBP12277 381 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms